AMCG00014621



Basic Information


Item Value
gene id AMCG00014621
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 20452184 ~ 20458681 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00014621
ATGGACGGTGTGGTGGAAAAAACTGAAGATCTTCTACCTGTATCTGCAGATGTATGTGTTGATAAGGCCAGAACAGAAGAATACGAACAAAGATTTTCAGAACTGGCACAGAAGGCAATCGCCTCAACACTTATCCTCTTTCCCAACACCACCACCGCCTCCCCCCTCAGCCCCAGGCGGACCTGTGCCGCCTCCGCCCCCGCCTCCGccacccccaccacctcctcctcttcctgggTGTGGTCCCTTCCTCAACGCCCCCGGCGGCGTCCCTCCGCCACCTCCTCTGGGATTCGGCGGGGGAAGCTGGTCTCCGCCTCCTCACACACTGCCTTTTGGATCCGACCACACGAGATGTCAGAGAACTGCTTCTGGATAATGGCAAATGAAGACAAATATGAGAATCCTGACCTGCTTGCTAAGCTTGCTCATACTTTTGGCTCTCAGAGGCTAGGTGAGTTTCTTTGGATAAAACCCCACACTGCACAGATGCAGGTCATAGATGTCCGGTATAAACTTGATAATTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00014621 True 528 mRNA 0.54 3 20452184 20458681

Neighbor


gene id symbol gene type direction distance location
AMCG00014623 LOC108428456 coding downstream 51151 20359146 ~ 20401033 (-)
AMCG00014616 NA coding downstream 1061332 19386615 ~ 19390852 (-)
AMCG00014614 NA coding downstream 1106514 19342131 ~ 19345670 (-)
AMCG00014615 NA coding downstream 1113524 19330888 ~ 19338660 (-)
AMCG00014600 NA coding downstream 1267991 19174682 ~ 19184193 (-)
AMCG00014620 diaph3,LOC102302025,LOC102782473 coding upstream 17668 20476349 ~ 20479063 (-)
AMCG00014622 LOC106574996 coding upstream 243143 20701824 ~ 20708613 (-)
AMCG00014625 NA coding upstream 837333 21296014 ~ 21312988 (-)
AMCG00014626 NA coding upstream 1162144 21620825 ~ 21627890 (-)
AMCG00014627 pcdh9 coding upstream 1317725 21776406 ~ 21779501 (-)
G71379 NA non-coding downstream 265216 20186629 ~ 20186968 (-)
G71371 NA non-coding downstream 374175 20073025 ~ 20078009 (-)
G71360 NA non-coding downstream 571953 19792799 ~ 19880231 (-)
G71315 NA non-coding downstream 1196250 19252574 ~ 19255934 (-)
G71292 NA non-coding downstream 1235147 19216213 ~ 19217037 (-)
G71451 NA non-coding upstream 1539241 21997922 ~ 21998188 (-)
G71461 NA non-coding upstream 1762389 22221070 ~ 22221467 (-)
G71496 LOC100846954 non-coding upstream 1847953 22306634 ~ 22306947 (-)
G71512 NA non-coding upstream 2098702 22557383 ~ 22557663 (-)
G71526 NA non-coding upstream 2396668 22855349 ~ 22855619 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 1226954 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 1248617 19201803 ~ 19203567 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 2430089 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 2831033 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 2989894 17446868 ~ 17462290 (-)
AMCG00014630 LOC107672672 other upstream 1767243 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 6826739 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 6877014 27335695 ~ 27369527 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 7871058 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 8930609 29389290 ~ 29398305 (-)

Expression



Co-expression Network