AMCG00014632 (nfip2,LOC107750051)


Basic Information

Item Value
gene id AMCG00014632
gene name nfip2,LOC107750051
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 22247781 ~ 22264000 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014632
ATGGATAACCAGGCAGTGAGCAGATATCAAGTGTTGCACAATGAGGATGATCCCTCTGAGCCGTCTGCCACCCAAGAGGCATCCAGTTCTGTTCAGATTCCACCTCCTTCTGAATCTGCAGTGCCATTGGAGGTTCCGCCGCCTCCTTACAGCAGTGTTGCTTTAGGAGCAACTGCAGCTCCAGAAGGTGATTATCACCGTGATTTCCACCCTGTCCCGCCTCCATACAGTGTTGCTACCTCCTTGCCCACCTATGATGAAGCAGAAAAGGCCAAAGCTGCAGCAATGTCTGCTGCCTCAATGGATGTTGTGCAGAGGGAGGACGATTTCCCACCTAGAGATGACTTCAGTGATGCTGATCAGCTGAGAGTTGGAAATGATGGGATATTCATGTTGGCGTTTTTCATGGCTTTTCTTTTCAACTGGATTGGcttttgtctgtctttctgcctGACCAACACTATAGCAGGAAGATATGGTGCAATCTGTGGATTCGGCCTTTCCCTTATTAAATGGATCCTCATTGTCAGGTTTTCTGATTATTTTACTGGATACTTCAATGGCCAGTACTGGTTGTGGTGGATATTCCTTGTCCTTGgtaagtttatttattgttccgTGGCAGGGGGTCTCCTGCTCTTCTTCAGAGGATTTGTGAACTACCTTAAAGTTCGTAACATGTCTGAAAGCATGGCAGCATCCCACAGGACGCGTTTCTTCTTCTTGTACTAA

Function

NR:

description
PREDICTED: NEDD4 family-interacting protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014632 True 732 mRNA 0.47 7 22247781 22264000

Neighbor

gene id symbol gene type direction distance location
AMCG00014624 NA coding upstream 1580601 20646339 ~ 20667180 (+)
AMCG00014619 NA coding upstream 2174711 20024521 ~ 20073070 (+)
AMCG00014618 NA coding upstream 2226087 19959589 ~ 20021694 (+)
AMCG00014617 NA coding upstream 2403739 19843152 ~ 19844042 (+)
AMCG00014605 NA coding upstream 2863462 19380431 ~ 19384319 (+)
AMCG00014635 NA coding downstream 2118767 24382767 ~ 24385815 (+)
AMCG00014636 LOC108414264,LOC103139365,LOC102217784,LOC103461949 coding downstream 2428286 24692286 ~ 24759297 (+)
AMCG00014638 NA coding downstream 2624533 24888533 ~ 24897009 (+)
AMCG00014637 NA coding downstream 2664031 24928031 ~ 24937965 (+)
AMCG00014643 NA coding downstream 2823014 25087014 ~ 25102638 (+)
G71462 NA non-coding upstream 17085 22228426 ~ 22230696 (+)
G71460 NA non-coding upstream 51906 22195619 ~ 22195875 (+)
G71459 NA non-coding upstream 58854 22188639 ~ 22188927 (+)
G71452 NA non-coding upstream 125248 22119583 ~ 22122533 (+)
G71424 NA non-coding upstream 935759 21311590 ~ 21312022 (+)
G71518 NA non-coding downstream 391358 22655358 ~ 22655614 (+)
G71557 NA non-coding downstream 1100760 23364760 ~ 23365002 (+)
G71574 NA non-coding downstream 1333118 23597118 ~ 23597323 (+)
G71581 NA non-coding downstream 1441163 23705163 ~ 23705434 (+)
G71584 NA non-coding downstream 1644385 23908385 ~ 23908649 (+)
G71004 NA other upstream 3973421 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 4760731 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 5778572 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 6108749 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 6561882 15675631 ~ 15685899 (+)
G71525 NA other downstream 591342 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 4640877 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 5571503 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 5604703 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 6038373 28302373 ~ 28304073 (+)

Expression


Co-expression Network