AMCG00014636 (LOC108414264,LOC103139365,LOC102217784,LOC103461949)


Basic Information

Item Value
gene id AMCG00014636
gene name LOC108414264,LOC103139365,LOC102217784,LOC103461949
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 24692286 ~ 24759297 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014636
atgatgatgatgatgatgaaagAATTTTTCCTGGAGCTCCTAGACAACACGGAGAAGTCCCTCAATGACATGTTTGTGCGGACTTATGGCAAGCTGTACACGCAGAACTCAGAAGTGTTTCAGGATCTGTTCACCGAGCTCAAGCGCTACTACACGGGCGGGAATGTTAACTTGGAGGAGATGTTGAATGACTTCTGGGCCCGGTTGCTGGAGCGAATGTTCCAGCTTTTGAACTCGCAGTATCATTTCACGGACGACTACTTGGAATGTATTAGCAAATACACGGACCAGCTCAAGCCTTTTGGAGATGTGCCCAGAAAACTGAAGGCTCAGGTTACCAGGGCATTCATCGCTGCCCGTACATTTGTCCAGGGACTCACTGTTGGAAGAGAGGTGGCCAACAGAGTATCCAAGGTATTATAA

Function

NR:

description
PREDICTED: glypican-6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014636 True 423 mRNA 0.48 3 24692286 24759297

Neighbor

gene id symbol gene type direction distance location
AMCG00014635 NA coding upstream 306471 24382767 ~ 24385815 (+)
AMCG00014632 nfip2,LOC107750051 coding upstream 2428286 22247781 ~ 22264000 (+)
AMCG00014624 NA coding upstream 4025106 20646339 ~ 20667180 (+)
AMCG00014619 NA coding upstream 4619216 20024521 ~ 20073070 (+)
AMCG00014618 NA coding upstream 4670592 19959589 ~ 20021694 (+)
AMCG00014638 NA coding downstream 129236 24888533 ~ 24897009 (+)
AMCG00014637 NA coding downstream 168734 24928031 ~ 24937965 (+)
AMCG00014643 NA coding downstream 327717 25087014 ~ 25102638 (+)
AMCG00014646 NA coding downstream 364797 25124094 ~ 25126045 (+)
AMCG00014644 dnajc3 coding downstream 390506 25149803 ~ 25163635 (+)
G71598 NA non-coding upstream 159325 24523645 ~ 24532961 (+)
G71596 NA non-coding upstream 358989 24332431 ~ 24333297 (+)
G71584 NA non-coding upstream 783637 23908385 ~ 23908649 (+)
G71581 NA non-coding upstream 986852 23705163 ~ 23705434 (+)
G71574 NA non-coding upstream 1094963 23597118 ~ 23597323 (+)
G71662 NA non-coding downstream 323362 25082659 ~ 25082878 (+)
G71670 NA non-coding downstream 349859 25109156 ~ 25109378 (+)
G71725 NA non-coding downstream 774045 25533342 ~ 25534154 (+)
G71763 NA non-coding downstream 946161 25705458 ~ 25762742 (+)
G71772 NA non-coding downstream 986506 25745803 ~ 25748408 (+)
G71525 NA other upstream 1836640 22855342 ~ 22855646 (+)
G71004 NA other upstream 6417926 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 7205236 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 8223077 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 8553254 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 2145580 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 3076206 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 3109406 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 3543076 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 4037752 28797049 ~ 28837910 (+)

Expression


Co-expression Network