AMCG00014638


Basic Information

Item Value
gene id AMCG00014638
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 24888533 ~ 24897009 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014638
atgttaattgctCCTATTGTCTGCCAGCGGGGTGTGTGGTGCATCAAGGTGATTGACATTAAAGAGAAACTGAAGCATTCAAAGAAGTTCTGGTCCACTATACCCGACAGCATCTGTTCGGGTGACAAAGTGACCGCTGGCAAGTCGAACGAGGATGAGTGCTGGAATGGCCACACAAAGGGGAGGTATTCTCCTGAAGTTTTAAACAATGGACTGACAAACCAGATAAACAACCCCGAAGTTGAGGTGGACATCACAAGACCAGACACCTTCATTCGTCAGCAGATCATGACACTCAGAGTAATGACAAATAAGCTGAGAAATGCATATAATGGGAATGATGTCAATTTCCAGGACACGAGCGACGAAGGCAGCGGTTCGGGAAGTGGCAGCGGCTGCACTGAGGCCTGTGTCACCGAGTTCGATTTCATCAGCACGGAGGCTCCCGCTGTCGGCGCAGACAGAAGTGAAGACAAAGCTTCGGCCGTCAAGCCGAGTTACTCTCTAGTACTGACCTTCGTCCTGACCTGCACGTTCTTTGCACTTCAGAGGCAGTGGAGATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014638 True 564 mRNA 0.50 4 24888533 24897009

Neighbor

gene id symbol gene type direction distance location
AMCG00014636 LOC108414264,LOC103139365,LOC102217784,LOC103461949 coding upstream 129236 24692286 ~ 24759297 (+)
AMCG00014635 NA coding upstream 502718 24382767 ~ 24385815 (+)
AMCG00014632 nfip2,LOC107750051 coding upstream 2624533 22247781 ~ 22264000 (+)
AMCG00014624 NA coding upstream 4221353 20646339 ~ 20667180 (+)
AMCG00014619 NA coding upstream 4815463 20024521 ~ 20073070 (+)
AMCG00014637 NA coding downstream 31022 24928031 ~ 24937965 (+)
AMCG00014643 NA coding downstream 190005 25087014 ~ 25102638 (+)
AMCG00014646 NA coding downstream 227085 25124094 ~ 25126045 (+)
AMCG00014644 dnajc3 coding downstream 252794 25149803 ~ 25163635 (+)
AMCG00014648 hs6st3,LOC105898056,LOC102202054,LOC101476457,LOC100690379 coding downstream 348404 25245413 ~ 25245961 (+)
G71598 NA non-coding upstream 355572 24523645 ~ 24532961 (+)
G71596 NA non-coding upstream 555236 24332431 ~ 24333297 (+)
G71584 NA non-coding upstream 979884 23908385 ~ 23908649 (+)
G71581 NA non-coding upstream 1183099 23705163 ~ 23705434 (+)
G71574 NA non-coding upstream 1291210 23597118 ~ 23597323 (+)
G71662 NA non-coding downstream 185650 25082659 ~ 25082878 (+)
G71670 NA non-coding downstream 212147 25109156 ~ 25109378 (+)
G71725 NA non-coding downstream 636333 25533342 ~ 25534154 (+)
G71763 NA non-coding downstream 808449 25705458 ~ 25762742 (+)
G71772 NA non-coding downstream 848794 25745803 ~ 25748408 (+)
G71525 NA other upstream 2032887 22855342 ~ 22855646 (+)
G71004 NA other upstream 6614173 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 7401483 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 8419324 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 8749501 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 2007868 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 2938494 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 2971694 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 3405364 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 3900040 28797049 ~ 28837910 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_00862803_00911972 GPC6A, GPC6 coding CI01000299 null 862803 ~ 911972 (+)