Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014640 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 24914303 ~ 24927812 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K01710 | rfbB, rmlB, rffG; dTDP-glucose 4,6-dehydratase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014640 | True | 1311 | mRNA | 0.40 | 12 | 24914303 | 24927812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014639 | NA | coding | downstream | 4021 | 24900091 ~ 24910282 (-) |
| AMCG00014634 | NA | coding | downstream | 589661 | 23765078 ~ 24324642 (-) |
| AMCG00014633 | NA | coding | downstream | 1309572 | 23603609 ~ 23604731 (-) |
| AMCG00014631 | NA | coding | downstream | 2581493 | 22320028 ~ 22332810 (-) |
| AMCG00014628 | NA | coding | downstream | 2788937 | 22119740 ~ 22125366 (-) |
| AMCG00014641 | sox21 | coding | upstream | 33134 | 24960946 ~ 24961689 (-) |
| AMCG00014642 | NA | coding | upstream | 76693 | 25004505 ~ 25073710 (-) |
| AMCG00014645 | NA | coding | upstream | 202526 | 25130338 ~ 25143368 (-) |
| AMCG00014647 | NA | coding | upstream | 238134 | 25165946 ~ 25239586 (-) |
| AMCG00014650 | NA | coding | upstream | 470018 | 25397830 ~ 25398834 (-) |
| G71593 | NA | non-coding | downstream | 758155 | 24155730 ~ 24156148 (-) |
| G71591 | NA | non-coding | downstream | 833556 | 24080548 ~ 24080747 (-) |
| G71583 | NA | non-coding | downstream | 1208437 | 23705566 ~ 23705866 (-) |
| G71582 | NA | non-coding | downstream | 1208883 | 23705199 ~ 23705420 (-) |
| G71561 | LOC107575789 | non-coding | downstream | 1501319 | 23412616 ~ 23412984 (-) |
| G71723 | NA | non-coding | upstream | 560414 | 25488226 ~ 25490651 (-) |
| G71726 | rap2a,LOC106512668,LOC106582448,LOC100695037,LOC103391592 | non-coding | upstream | 580785 | 25508597 ~ 25508870 (-) |
| G71727 | NA | non-coding | upstream | 603126 | 25530938 ~ 25533180 (-) |
| G71740 | ipo5,kpnb3,LOC107730386,LOC107555240 | non-coding | upstream | 663006 | 25590818 ~ 25591551 (-) |
| G71835 | NA | non-coding | upstream | 1099723 | 26027535 ~ 26028500 (-) |
| AMCG00014630 | LOC107672672 | other | downstream | 2669388 | 22225924 ~ 22244915 (-) |
| AMCG00014603 | tpt1,LOC106582181 | other | downstream | 5689073 | 19217722 ~ 19225230 (-) |
| AMCG00014604 | kctd4,LOC107688678,LOC107748885 | other | downstream | 5710736 | 19201803 ~ 19203567 (-) |
| AMCG00014567 | mzt1,si:dkey-15d12.2 | other | downstream | 6892208 | 17990651 ~ 18022095 (-) |
| AMCG00014559 | NA | other | downstream | 7293152 | 17589267 ~ 17621151 (-) |
| AMCG00014693 | NA | other | upstream | 2357608 | 27285420 ~ 27304597 (-) |
| AMCG00014692 | LOC107756725 | other | upstream | 2407883 | 27335695 ~ 27369527 (-) |
| G72236 | rpl8,LOC107595836,LOC107748161 | other | upstream | 3401927 | 28329739 ~ 28332482 (-) |
| G72477 | LOC106598269,LOC101158751,LOC106586690,LOC103361283 | other | upstream | 4461478 | 29389290 ~ 29398305 (-) |
| AMCG00014775 | NA | other | upstream | 5913711 | 30841523 ~ 30846800 (-) |
