AMCG00014647



Basic Information


Item Value
gene id AMCG00014647
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25165946 ~ 25239586 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00014647
CATCCCAAAAAGATGTATCTCCTCTTTCTGCTGGTGCTGTCACTGAACACTCCATGCGTTCTTGCCGCCACAAAAGGGGTGACTGCCAGTTTAAGTGCCAAGTGGCCAGCTACGCCACTTCTACTAGAGACCAGTGAGTTTATTGCTGAAGGTGGCGAAGACAAATTTTGGCAGTTTGTGGACACTGTTCGAGAACTTACAGTATATAAGAATGGTGAGTCTGTACGGTCTTATTACAACTTGATAATGAAAAAGGCTGGACAATTTGTTACTGATCTTCAAGTCAATCTTCTCAAGTTTGCCCTGTCCTTGAGAGCGTATTCTCCGGCAGTATATGCATTTCAGCAGGTTGCTGTGGATGAGTCACCACCTGAAAATTGCACTGCTTTTGTGTCCATTCATGGAAAACACACTTGCAGCACCAAAGAAGTTAAGAAGCTCTTGAAAACGGCAGCAGGCAGGCCGAGGCCATACTTGTATAAGAGTGATCACGTATTTCCAGGCATCAATGGCAGTGATCTCCCAGTTGTCATTCTTTACGCTGAAATTGGTACCAATAAGTTTAATACCTTTCACAAGCTGTTGTCCCAGAAAGCTGTAGATGGTAAAATCACGTATGTCCTCCGACACTTTATAGTGaaCCCTAGgatgaataaaatgcatttatctgGATATGGGGTTGAGTTGGCCATAAAAAGCACTGAGTACAAAGCTGTTGATGACAGCCAAATAAAAGATACGAATACTAGACTGAACGAGGAAGATGATGAGGACGATGTCCAAGGATTTCTTTTTGGAAAATTGAAAAAGGTCCATCCTGAGTTGAAGGAACAGTTGAGTGAGCTAAGGAATCACCTGGCCGAGAGCACCAATGACATGGCTCCTTTGAAAGTCTGGGAACTTCAAGACCTTAGTTTCCAAGCAGCAACCCAGATAACCTCTGCTCCAAAACATGACGCTCTGAAGTTGATGAGAGATATTAGTCAGAACTTCCCCATCAAAGCCAGATCACTGACAAGAATGGTTGTAaaccaagaaatgaaaaaagaaattgaGGAAAATCAAAAGTATCTGAGTGAAACATTAGGAATTCAGCCCGGGGAAGCAGGCCTGTTCATCAATGGACTTCATATTGATTTAGATCTTCATAATCCATTCAGTATTCTGGATATTCTTAAGGCGGAAGGAAAGGTCATGGAGGGTCTTCATAACCTTGGTATTAAGGACAGTGACCTCAGTAAACTTTTGAGGCTCACTGTGCAGCCTGTGGAGGACAGCTTCGCCCTGGATATTCGGCATCCTGCTATAATGTGGGTCAATGACATAGAAAAAGACTCCATGTACCGAACGTGGCCTTCTAGCTGTCAAGAGCTACTTCGGACAACATTCCCAGGTGTCATACGTCAAATACGACGCAATTTTTTCAGTCTGGTGCTGTTCATTGATCCATCACAGGAAGACACAGGTGAGCTAGTTAAACTAGCAGAACTTTTCTACCAGCACAAGATTCCTCTCAGGATTGGGTTTGTATTTGTTGTCAATACGGATGACAAAGTTGATGGCTACCTGGATGCAGGAGTTGCACTTTACAGAGTCTTGAACTACATATCTGAGGAGTATGACTTTTCACAGGCTTTTATCTTCATGGTTTCTATGTACAACAAAGTAGAGAGTGGAGAAGGTCTCACTGTAGATACAGTGGTTGGATATTTGAAGAAAAAGTTTCCTAGTGCCAATGCTCCCAGAATTATTGGTGTGGAGTCTCTGAAGAGTGGGCTGGGTGTGTTACCCCAGGCTCTCTTCAATGGGGTTCCCTTCAGTAATGAGGAAATGGACCCTGATGACCTGGAGACCGTTCTTCTTCAGCGCATCATGGATGCTACTAACTTTTTCCAAAGGGCAGTTTTCATGGGTCAGCTGAATGATGAAACCGATGTGGTTGAATTCCTGATGGATCAGCCACATGTGGTGCCACGCATCAATCCTCTCATTCTGAGTCCCCAGAGGAATTATCTGGATCTCACCTCCACCCCAGcttTAGAAGACTGGCTTGACACAATTACTTTCTCATACCTGGACTCCAGAGACAAGAGTGCGGTTATTTCCGAAAATATGAAGTATATCACTAAAACCGATGAGGACATAATTTATGGAGTGACCATCTGGATTATTACGGATTTTGACAAGCCACCTGGGAGGAGACTGCTGCTGAATGCCATGAAACACATGaaaTCTAGCCCAAACACTCGCATAGGGGTGCTAAACAACCCAAGCACCAAGCCAACGGAAGAGAACAGTGTGATTGCCAGGGCAATTTGGGCAGCGCTCCTCACACAGAAAGGAAAGGAACCATTTAATTTCATTGCAAAGCTCATCAAAGAAGAAAGCATTCAGATGCTTGCTCAAGGAACTAAAATGAAGAATTTACTCTTGCCGGGAATGGATAATGATGGTTTTGAGAAGAAGCACAACACCATAAGTGTGGATTTCATCAGAACCCAACAGCACTTCTGCAGAGATGTTCTCAAACTGCTCCCTGGTCAGTCGGCTCTGCTGAGCAACGGAAGGATTTTGGGACcatttgaagaaaaagaagaatttCATGATGAAGATTTTCATCTGTTGGAAAAGATAACCCTGAGCACTTCAGCAGAGAAGATCAAAGTTAAAATCAAGCAGATGGGAGTGAAAGCAAAACAGGCCAGTGATCTAGTTATGAAAGTAGATGCTCTTCTGACTTCTGCTCCCAAGGGAGAATCCAGGAGGGATGTCAGGTTTATTAAAGATAAACAGAGtataGTACAGATACCCCCTCGGGAAGATGAAGTGTACTATCATGTTGTAGCCATTGTGGACCCACTGACTAGGGAGGCCCAGAAGATGTCACCACTGTTAATTGTGCTCGGTCAAGTGATCAATATGAAACTGCAGGTATTTATGAACTGCAAGTCCAAGCTTTCCGAGATGCCTCTGAAGAGCTTCTACCGTTTTGTGCTGGAGCCTGACGTTTCCTTTCTAGCCAATGACACCCTGTCTCCTGGACCGGTGGCTAAGTTCGTGGAAATGCCAGAATCTCCTCTTCTCACCCTGAACATGATCACTCCTGAGAGTTGGCTGGTGGAAGCTGTTAGAAGCTCATATGACCTTGATAACATTCACCTACAAGagGTAAATGGATTTGTGACAGGAGAATATGAACTGGAGTACCTGCTGCTTGAAGGGCACTGCTTTGACATTACGACTGGACAGCCCCCTCGGGGTTTGCAGTTCACTCTCGGGATGAAGAATGATCCTCTCAGGCAAGACACCATAGTGATGGCCAATCTGggtTATTTTCAGTTGAAGGCCAACCCTGGTGCCTGGACCTTGAGGTTACGTAAAGGAAGTCATGAAGGCACAGACTCTCCAGCTGACGCAGACGATGTGATTGTTGTGTTAAACAGCTTCCACAGTAAAATCATCAAAGTCAGGGTGCAGAAAAAACCTGACAAAATAAACGATGACCTCCTTAGTGACGGTTCTGAAGACAAAGGACTGTGGGAATCTTTAACAAGTATTACAGGAGGATCTACATTAGACGATGCCGAGAATAAGAAAGAGGATGTTCTGAACATTTTTTCCGTGGCTTCAGGACATTTATATGAACGCTTTCTAAGaataaTGATGCTGTCGGTTTTGCAACACACTTCAACCCCTGTCAAGTTCTGGTTTCTAAAAAACTACCTCTCACCTACGTTTAAGGAATCGATCCCTCACATGGCGAGAGCGTATGGATTCCAGTATGAGTTGGTGCAATACAAGTGGCCTCGCTGGCTCCACCAGCAGACTGAGAAGCAGAGGATTATCTGGGGATACAAGATCCTGTTTCTGGATGTGCTTTTCCCTCTGGCTGTGGATAAAATAATCTTTGTGGATGCTGACCAGATAGTCAGGAGTGACCTGAAGGAGCTGAGGGATCTGGACCTGGACGGAGCTCCATATGGTTACACACCTTTCTGTGACAGTCGCAAGGAAATGGACGGGTACCGCTTCTGGAAGTCAGGGTACTGGGCGTCTCATTTAGGAAACAGGAAGTATCATATCAGTGCCTTATACATTGTTGATTTGAAGAAGTTCAGAAAGATTGCTGCTGGGGACAGGCTGAGGGGTCAATATCAAGCATTGAGCCAGGATCCAAACAGCTTGTCTAACCTAGATCAGGACCTCCCCAACAACATGATCCACCAGGTGGCAATTAAGTCTCTGCCGCAGGAGTGGTTGTGGTGTGAGACCTGGTGTGACGACGGCTCCAAGGCGACAGCGAAAACTATTGATTTGTGCAATAACCCCAGGACAAAAGAGCCCAAGCTGAAGGCTGCAATGAGAATTGTGCCGGAGTGGGTTGAATAtgataatgaaattaaacagcTACTGAAAAGGGTTGCAGAACAAAAGCCCAATTCAAAAGACAAGAGAGGTGATAAACACGATGAACTTTAGAAGGTATTGTTCATGTGCTGGAGAAATGGAACTGACATTTGCACAGCTAACCCTTCTGTGAAGCTGGAAGATTTTGTCAGTGTACAGATGTACAGTTTCCAAGGCTTTAGCCCGGGAGTCGTATTTGCTGGAGCGGACAAATGCggaaacaagaacaaatatgttgttttgtaaaatattttctacCTTTTTTCTAATTTGACTGTGGTGGAGATAGGACAATATGTACTTTAAAAGTAGTAATCCATGTGTTTCCGGACACCATGTGACCAGTTGTCTGTGACACGTCTGTAATACTTGCTTTCGTCATACAGCATGCATTTAGCTTGTCTGTCTCTTACTATATGGCTTCAAACAGTAAGAAAAGGGGGAACTAAACAATATTGCACTGATAAACCAAGAGTGACAATCACTGCAGTCTTCTCCAAATTACtatcaaatggaaaatgtatcaatattaatatgatcAGGTAGGTTTTGGTGTGTTTTGCTGCATTGGTTTTGCAAGGTGATGAGCTCTAGGTCACAGATTTTCAAatgattatttaaacaaatacggTTTGTCCTGACAACAACAGAAGATACCTGCTATCATGGGTCAACTGGGTAGCCAGTTCACcttcaagaaacattttccagtgccagtctattttaattccagtttaCATGGAGTAAGACATTTAAACTTTAtctcattattgttatttaacaactCATTAGGTcatactttttatattatattgttattgattatttCTTTGTGCAAAGTTGGAGATATAGCCATATCCAGCACTACAGTATAAAGTGAAGGTGCAGTATTCTCTACATGCTTTATTAGTCGGGTCCACCCAGGAAACTGCTCGAGAGCTTTGTGTTACCATCAGGACCTGCATGTGGTATGACAGCAGTGCTTCCAGACTGTGGTACTGCgcacaatatacagtatttttgttttgttttaatgtaatatgaGTGAAAACTGCTTAATTAATTATGGAGTCTTAGcagcataaaatgttattacattattttaaaattaatatgtaattacTATTTGCACACTGACTGTCAAAATTTTGAAACTGCATAACTGTTCTATATACCTCAGTCTGTACAAAACCAGCAAGGAAAACAGCTTTCTGTCCTGTGTCTACAAACCTTTTGGAAAAGGCGAGCTATGCATTGATCCAGGTATCATGGATGATAACGGTTATTGATGTCAAAGTTGTCAATTTTCATTGGACAGGCTATAACCGGTTTCCAGTACTCGATTTAAAACGTCAACCCTGTCTATTTGAGAGTGGCATTCTGTTTTCATCGTGCAGTTAATAAAAGTTTGCCAACA

Function


GO: NA

KEGG:

id description
K11718 HUGT; UDP-glucose:glycoprotein glucosyltransferase

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00014647 True 5824 mRNA 0.43 39 25165946 25239586

Neighbor


gene id symbol gene type direction distance location
AMCG00014645 NA coding downstream 22578 25130338 ~ 25143368 (-)
AMCG00014642 NA coding downstream 92236 25004505 ~ 25073710 (-)
AMCG00014641 sox21 coding downstream 204257 24960946 ~ 24961689 (-)
AMCG00014640 NA coding downstream 238134 24914303 ~ 24927812 (-)
AMCG00014639 NA coding downstream 255664 24900091 ~ 24910282 (-)
AMCG00014650 NA coding upstream 158244 25397830 ~ 25398834 (-)
AMCG00014656 stk24,LOC103147175 coding upstream 470048 25709634 ~ 25729632 (-)
AMCG00014659 NA coding upstream 514262 25753848 ~ 25763919 (-)
AMCG00014658 dock9,LOC106586262 coding upstream 535383 25774969 ~ 25851971 (-)
AMCG00014663 NA coding upstream 661863 25901449 ~ 25901694 (-)
G71593 NA non-coding downstream 1009798 24155730 ~ 24156148 (-)
G71591 NA non-coding downstream 1085199 24080548 ~ 24080747 (-)
G71583 NA non-coding downstream 1460080 23705566 ~ 23705866 (-)
G71582 NA non-coding downstream 1460526 23705199 ~ 23705420 (-)
G71561 LOC107575789 non-coding downstream 1752962 23412616 ~ 23412984 (-)
G71723 NA non-coding upstream 248640 25488226 ~ 25490651 (-)
G71726 rap2a,LOC106512668,LOC106582448,LOC100695037,LOC103391592 non-coding upstream 269011 25508597 ~ 25508870 (-)
G71727 NA non-coding upstream 291352 25530938 ~ 25533180 (-)
G71740 ipo5,kpnb3,LOC107730386,LOC107555240 non-coding upstream 351232 25590818 ~ 25591551 (-)
G71835 NA non-coding upstream 787949 26027535 ~ 26028500 (-)
AMCG00014630 LOC107672672 other downstream 2921031 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 5940716 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 5962379 19201803 ~ 19203567 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 7143851 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 7544795 17589267 ~ 17621151 (-)
AMCG00014693 NA other upstream 2045834 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 2096109 27335695 ~ 27369527 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 3090153 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 4149704 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 5601937 30841523 ~ 30846800 (-)

Expression



Co-expression Network