AMCG00014662


Basic Information

Item Value
gene id AMCG00014662
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25901904 ~ 26035827 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014662
ATGAGACACAAGATGCAAAACCCTGCATTGCTGAAACAAATGGAGTTGAGCAGCAACATGAGCAATGAGACCTGTACCAACCTGTATGACCACCGCGGTACTGCCAAGATCCTCATGCCACTGCACTACTCCATCGTCTTCATCGTGGGCCTACTGGGCAATGCCCTAGCCCTTCACGTTATCAGGCCTAACCTGAAGAAGATTAACTCCACCACCCTCTACTCCACCAACCTTGTCATCTCTGACATCCTCTTCACCCTGTCCCTGCCCCTGCGCATTGTCTACTATGCCCGGGGCTTCGACTGGATCATGGGGGAAGCGCTGTGCAGAGTCATTGCCCTTATCTTCTACATCAACACCTATGCCGGGGTGAACTTCATGACCTGCCTGAGTGTGGACCGCTTCATCGCCGTGGTGCTGCCCCTGCGCTACAGCCGCTTCCGCAAAGTTCAAAATGTCAAGTACATCTGCATCATCGTGTGGCTCATCGTACTGGTTCAGACGCTTCCTTTGCTCACCATGCCCATGACGAAACTAGAAGCAGGCGGACACACAACCTGCATGGAATACCCAAATTTCGAAAACCTGCCTAACCTGCCTTTTATGCTGATAGGCGCTGTGTTTTTAGGATATGTTATCCCAGTGGTAACCATATTAGTCTGCTATTCTGGATTATGCTGGAAGCTTTATTCCACAGCCAAGCAAAACCACCTCACCGAGAAATCTGGAAGGAATAAAAAGGCCATCAGTGTGATCTTTTTCGTCATCCTGGTGTTTGTGGTCTGCTTCAGTCCCTACCACATTGACATCTTACAGTTCATGGTTAAGAAACTGCTGTATACGCCCGACTGCTCCGAGCTGCACAGATTTCAGGTGTCCCTGCATTTCACAGTGTGTCTGATGAACTTCAACAGCTGCATGgacccttttatttatttctttgcctGCAAAGGCTACAAAAGGAAAATCATGAAGCTGATGAAACGGCAGAAATTGCAGATTATGGAAACATACAACAACACTTCTATGGGGATGATGATTGCTGAAAGGGAGCCAGTGGAATACAGGATAGCAGGCCTGGTGTTCTACGGCACCATCTTCATCATTGGAATTGTCGTCAACAGCACGGCATTATGGGTCTTCAGCCTGACCACCAAGAGGAGAAACTCGGTCACCATCTACATGATGAATGTGGCCTTGGTGGACCTGATTTTTATACTGACACTGCCGTTCCGCATGGTTTACTATGGGAACAACTACTGGCCTTTTGGCGACATGTTCTGCCGGATCACAGCGGCGCTGACTGTATTCTACCCTTGCACTGCTCTGTGGCTCTTTGCTTTAATAAGCGCGGACCGCTATGTGGCTATCGTGCAGCCCAAGCACAGCAAGGAGTTGAAAAACATCGGCAAAGCCACCATATCGTGCGTGGGAGTGTGGATAATGTCTCTGGGGTGCTCGACGCCGCTCCTCTTTGCGGACAACGATCCCGACCAGGCGTCCAACTTCACCACCTGCCTGAAAATGCGCGACATCATTCACCTGAAGCAGGACAACCCAGTGAACTTCGTCCGCCTCGTCTTCTTCTTCCTGGTGCCCATGTTCATCATGATTGGCTGCTACTGTATCATCGTGGACAACCTGATCCACGGGCGCACTTCTAAGCTCAAACCCAAAGTCAAGCACAAGTCCATCAGGATCATCATCACGCTGATCGTCCAGGTGCTGGTGTGCTTTGTGCCGTTCCACATCTGCTTCGTCTTCCTTCTGCTGGAGAACAGCGGCCAGGACTACAGCACCTGGGGCGCCTTCACCAGCTTCCTGATGAACCTCAGCACCTGCCTGGACATCATCCTGTACTACATCGTGTCCAAGCAGTTCCAGGACCGTGTCATCAGCGTCATCCTCTACCGCAACTACCTGCGCAGTGTCCGGAGGAAGAGTCTGCACACCAGCAGCATGCGCTCGCTCAGCAACATCAACAACACCAACCTCGAGGACAGTTTCCGTAAAGCGCTGCCGTTCTTTCGGCAGTACTTGGTCAACAATCCTCAGGTGGCTTTAAAACAACGGCTTGTTATTCTCGAGGCAGTGGAGACAGTTTCCAGAAAAGAGCCGCTGTCTTGCACAAAGAGGCTGATGACCGCAGTCATTTCTCTGAAGCTGCCTAAGATGACTGACCTCATGCAGCCGGCATTGAAGGCCCACTATACGACTGAGGGCGAGAAGACCCtgtactttgtttattttcaaacccGAAAATTACACCGCCACCCCGAGCTGAACAGCAGAGGGAGTTTccgggaggagggaggagtgcTGGGAAGGCGATGCGAGCAGACAGCGAGCCAGCCCCGCACGGCGCAGGACATTGGTGCAGCAATGAGACCCGGGAGAGACGGCGATTATGAGACAGTGACAGCGCCGGGGGACTGTTTATTATGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08410 GPR18; N-arachidonyl glycine receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014662 True 2445 mRNA 0.52 7 25901904 26035827

Neighbor

gene id symbol gene type direction distance location
AMCG00014663 NA coding downstream 210 25901449 ~ 25901694 (-)
AMCG00014658 dock9,LOC106586262 coding downstream 49933 25774969 ~ 25851971 (-)
AMCG00014659 NA coding downstream 137985 25753848 ~ 25763919 (-)
AMCG00014656 stk24,LOC103147175 coding downstream 172272 25709634 ~ 25729632 (-)
AMCG00014650 NA coding downstream 503070 25397830 ~ 25398834 (-)
AMCG00014666 zic5,LOC102789084 coding upstream 118237 26154064 ~ 26160288 (-)
AMCG00014675 NA coding upstream 300348 26336175 ~ 26336979 (-)
AMCG00014671 tmtc4,LOC107600375 coding upstream 310673 26346500 ~ 26360991 (-)
AMCG00014673 nalcn coding upstream 368255 26404082 ~ 26428529 (-)
AMCG00014674 LOC102787851 coding upstream 392854 26428681 ~ 26480278 (-)
G71740 ipo5,kpnb3,LOC107730386,LOC107555240 non-coding downstream 310353 25590818 ~ 25591551 (-)
G71727 NA non-coding downstream 368724 25530938 ~ 25533180 (-)
G71726 rap2a,LOC106512668,LOC106582448,LOC100695037,LOC103391592 non-coding downstream 393034 25508597 ~ 25508870 (-)
G71723 NA non-coding downstream 411253 25488226 ~ 25490651 (-)
G71593 NA non-coding downstream 1745756 24155730 ~ 24156148 (-)
G71871 NA non-coding upstream 185367 26221194 ~ 26221397 (-)
G71873 NA non-coding upstream 199584 26235411 ~ 26235615 (-)
G71874 NA non-coding upstream 207717 26243544 ~ 26243813 (-)
G71875 NA non-coding upstream 229904 26265731 ~ 26266216 (-)
G71876 NA non-coding upstream 232040 26267867 ~ 26268407 (-)
AMCG00014630 LOC107672672 other downstream 3656989 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 6676674 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 6698337 19201803 ~ 19203567 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 7879809 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 8280753 17589267 ~ 17621151 (-)
AMCG00014693 NA other upstream 1249593 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 1299868 27335695 ~ 27369527 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 2293912 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 3353463 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 4805696 30841523 ~ 30846800 (-)

Expression


Co-expression Network