AMCG00014665


Basic Information

Item Value
gene id AMCG00014665
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26085859 ~ 26123768 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014665
ATGTCACCCATCTATGAGGAATACAAGGGCAGAGACTCCTGGACTCGGTGTGTAGGCCATTGCCCCCAGCGTGCCCTGCAGTCCACCGCCAGGTACGTGCCCCGCAGGGCGGTGCTGTACGTCCCGGGGAACGACGAGCGCAAGCTGAGGAAGCTGCCCTCCCTCGACGTGGACTGCGCCGTGCTAGACTGTGAGGACGGCGTGGCTCTCAGCAAAAAGTCAGTGTTTTACTCTGTCTCAAAGGCTGAAGCTCGAGTGACAATCCCCCGAATGCTGGAGGAACTGGATTTGGGCCGCACGGAGAAATGTGTCCGAGTCAACTCTGTGTCGAGTGGGTTCGCCCAGCTGGACCTGGAAGTTATACTGCAGTCAAAAGTCTTGCCTCCTTCACTAATGCTACCTAAAGTTGAGACAACAGAAGAGGTTCAGTGGACTGTTTGTGAAGAAATCCGTCAGCTTGGACCCAAGACTGGTCTTCAGCATGACGGGGTGGTGTTTGGCTCAGATGATTTTTGTGCCAGCATAGgTGCCTCACGGACAAAAGATGCCAAAGAGCTCCTATATGCCAGACAGAAAGTGGTTGTCACAGCAAAAGCATTCGGCCTCCAGGCCATAGACCTTGTTTACATTGACTACCAGGACCAGGAGGGGCTCCGGCAGCAGTCGAGAGAGGGCGCTCTGATGGGCTTCACAGgtAAACAAGTGATTCATCCAAACCAAATTAAGACGGTTCAGGAAGAATTTTCTCCGAGTCCAGAACGAACCAAATGGGCTCAGGAACTGATAGCTGCATTTGAAGAGCACCAGAAGTTAGGGAAGggTGCCTTTACTTTCCATGGCAGTATGATCGACATGCCTTCATTAAAGCAGGCGCAGAACATTGTCACGCTGGCTGCGGCCATCCAAGACAAGTGA

Function

GO:

id name namespace
GO:0016830 carbon-carbon lyase activity molecular_function

KEGG:

id description
K11390 CLYBL; citrate lyase subunit beta-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014665 True 915 mRNA 0.53 7 26085859 26123768

Neighbor

gene id symbol gene type direction distance location
AMCG00014660 tm9sf2,LOC106574826,LOC107705039,LOC107719731,LOC107654273,LOC107556717 coding upstream 33316 26036433 ~ 26052543 (+)
AMCG00014661 gpr18,LOC107740919,LOC107681324,LOC107600424,LOC107748622,LOC107668869 coding upstream 144316 25934481 ~ 25941543 (+)
AMCG00014655 LOC107559785 coding upstream 386931 25660345 ~ 25698928 (+)
AMCG00014657 NA coding upstream 455005 25608988 ~ 25630854 (+)
AMCG00014654 kpnb3,ipo5,LOC107677849 coding upstream 493292 25575240 ~ 25592567 (+)
AMCG00014664 zic2,LOC106586042 coding downstream 44693 26168461 ~ 26172474 (+)
AMCG00014667 pcca,LOC107719738,LOC107707835 coding downstream 80115 26203883 ~ 26244458 (+)
AMCG00014668 pcca,LOC107654247 coding downstream 194263 26318031 ~ 26335361 (+)
AMCG00014669 LOC107748618 coding downstream 249456 26373224 ~ 26389223 (+)
AMCG00014670 NA coding downstream 265464 26389232 ~ 26409091 (+)
G71826 NA non-coding upstream 74859 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 126157 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 315370 25770209 ~ 25770489 (+)
G71763 NA non-coding upstream 323117 25705458 ~ 25762742 (+)
G71859 NA non-coding downstream 107451 26231219 ~ 26231565 (+)
G71963 NA non-coding downstream 828528 26952296 ~ 26953253 (+)
G71995 NA non-coding downstream 903007 27026775 ~ 27027272 (+)
G72072 NA non-coding downstream 1351296 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 2116798 28240566 ~ 28297484 (+)
G71525 NA other upstream 3230213 22855342 ~ 22855646 (+)
G71004 NA other upstream 7811499 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 8598809 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 9616650 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 9946827 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 781109 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 1711735 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 1744935 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 2178605 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 2673281 28797049 ~ 28837910 (+)

Expression


Co-expression Network