AMCG00014674 (LOC102787851)


Basic Information

Item Value
gene id AMCG00014674
gene name LOC102787851
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26428681 ~ 26480278 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014674
ATGGCTCAGAGTTGTCTGCGTTTTGTGTCTCCACAGCAAATGATGCGCTCCTCTGTGTTTCACATGTTCATCCTGAGCATGGTGGCGGTGGATGTGATTGTTGCCGCAAGCAACTACTACAAAGGGGAGACTCACCGGCAGCAATACGATGAGTTCTATCTCGCTGAGGTGGCCTTCACGGTTTTGTTTGACTTGGAGGCTCTTCTGAAGATCTGGTGCTTGGGCTTCACTGGATACATCAGCTCCTCTCTGCACAAATTTGAGTCACTGCTAGTAGTCGGCACAACCCTGCATATCTACCCAGTTCTGTATCACTCCCAGTTCACCTACTTCCAGGTCCTAAGAGTGGTACGACTGATTAAGATCTCACCAGCTCTGGAAGACTTTGTGTACAAGATTTTTGGGCCAGGGAAAAAACTGGGCAGTTTAGTTGTGTTTACAGCTAGTCTCCTCATTGTGATGTCAGCCATCAGTTTACAGATGTTCTGTTTTGTGGAAGAGCTGGACAGATTCACAACCTTTCCAAGGGCTTTCATGTCTATGTTCCAAATTCTCACCCAAGAAGGATGGGTTGACGTCATGGACCAGACTCTGGTTGCCGTGGGCCCGATGTGGGCTCCAGTGGTTGCAATTTACTTCATACTGTACCATCTTTTCGCCACGTTGATCTTGCTCAGTTTGTTTGTGGCTGTCATTTTGGACAACCTGGAGTTGGATGAAGATTTGAAAAAGCTTAAACAGCTGAAGCAGAGCGAAGCGAATGCAGACACCAAAGAGAAGCTCCCACTGCGCCTGCGCATCTTTGAGAAATTCCCCAACCGGCCACAGATGGTTAAGATCTCCAAGCTGCCCTCTGATTTCACTGTCCCTAGAATAAGGGAAAGCTTCATGAAGCAGTTCATTGATCGACAGCAGCAAGACACTAGCTGTCTGCTCCGGAGACTCCCCTccgcttcttcttcttcctgtgATCACTCAAAGAGGTCTGGAATAGAAGATAACAAATATATTGATCAAAAGttaCGAAGGTCAGTGTCCAGTATTCGTGCTCGGAATCTCTTGGAAAAGGAAACTACAATCAATAAAATCCTCCGGTCCCTGAGACATGGCTCAAACAGCCAGAGAATCAGCAGAGGAAAATCCCTGGAAACACTGACGCAGGACcacaCCAGCACTGTGAGGTACCGCAACGCGCAGAGAGAGGACAGCGAGATCAAAATGATCCAGGAGAAGAAAGAGCAGGCTGAAATGAAACGAAAAGTCCAGGAAGAAGAACTGCGAGAAAACCACCCTTACTTCGACAAGCCCCTGTTCATAGTTGGACGAGAACATCGCTTTAGAAACTTCTGCAGAGTGATAGTGCGAGCCCGCTTTAACGCGTAA

Function

NR:

description
PREDICTED: sodium leak channel non-selective protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014674 True 1383 mRNA 0.48 11 26428681 26480278

Neighbor

gene id symbol gene type direction distance location
AMCG00014673 nalcn coding downstream 152 26404082 ~ 26428529 (-)
AMCG00014671 tmtc4,LOC107600375 coding downstream 67690 26346500 ~ 26360991 (-)
AMCG00014675 NA coding downstream 91702 26336175 ~ 26336979 (-)
AMCG00014666 zic5,LOC102789084 coding downstream 268393 26154064 ~ 26160288 (-)
AMCG00014662 NA coding downstream 392854 25901904 ~ 26035827 (-)
AMCG00014672 NA coding upstream 41818 26522096 ~ 26539562 (-)
AMCG00014678 fgf14 coding upstream 162962 26643240 ~ 26645932 (-)
AMCG00014679 fgf14 coding upstream 200902 26681180 ~ 26698625 (-)
AMCG00014686 NA coding upstream 421943 26902221 ~ 26904187 (-)
AMCG00014688 NA coding upstream 499843 26980121 ~ 27034019 (-)
G71882 NA non-coding downstream 93681 26334655 ~ 26335000 (-)
G71880 NA non-coding downstream 104427 26324038 ~ 26324254 (-)
G71879 NA non-coding downstream 146716 26281374 ~ 26281965 (-)
G71876 NA non-coding downstream 160274 26267867 ~ 26268407 (-)
G71875 NA non-coding downstream 162465 26265731 ~ 26266216 (-)
G71961 NA non-coding upstream 451990 26932268 ~ 26932637 (-)
G72049 NA non-coding upstream 938538 27418816 ~ 27419045 (-)
G72089 NA non-coding upstream 1050018 27530296 ~ 27530643 (-)
G72139 NA non-coding upstream 1356061 27836339 ~ 27837927 (-)
G72146 NA non-coding upstream 1376461 27856739 ~ 27861375 (-)
AMCG00014630 LOC107672672 other downstream 4183766 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 7203451 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 7225114 19201803 ~ 19203567 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 8406586 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 8807530 17589267 ~ 17621151 (-)
AMCG00014693 NA other upstream 805142 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 855417 27335695 ~ 27369527 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 1849461 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 2909012 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 4361245 30841523 ~ 30846800 (-)

Expression


Co-expression Network