AMCG00014681


Basic Information

Item Value
gene id AMCG00014681
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26859733 ~ 26866240 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014681
ATGAGCTCTGTGCAGGAGTTGGACTCCGAGGCCAGCCGCCGCGCAGCCGCACAGCCGCACAGCTACACCGCAGCCGCACAGCCCGCACAGCCGCACAGCTACACCGCAGCCGCACAGCCGCACAGCCGCACAGCTACACCGCAGCCGCACAGCCTGCACAGCTACACCGCAGCCGCACAGATACACCGCAGCCGCACAGCCCGCACAGCCCGCACAGCTACACCGCAGCCGCACAGCCCGCACAGCCGCACAGCTACACCGCAGCCGCACAGCCGCACAGCCCGCACAGCCGCACAGCTACACCGCATCGCCGGCGGAGAGATGCAGCACCGCGCCTACCAACCCGTGCTTCCATGTGGAAACAAATATCTACAGCAGAAATGGGACCGAGCGGACTATGACGCGCACAGGAGAAAGgtGAAGTCCGCAAAACCTACGTTGAACACGACCTCGCCTCAATCATACGGCCACATggaacttaaaatgaaaaagctgcagCTGGAGGTAGAGCGCCTGACTATTATCCAACGAGACAATAACATGCTTCTGGGGAAGATTTCTTACATTATGAGGTCCACGGGTCGTATTGACAACAGGAATGACTACGAATATAAAAGTCTGGGCAGAGAGAAGAGGCAGCAAGAGCTGCTGCGCATCACCAGGGAGAACGAGAGCATCTTGGAGCGGATCTCCCGCTGTGGGCCGCAGTACACCTCAGAGAAGTGGCGCGAGGACTGGCGCCGGACTGAGAAGCTCCGGGAGAGCATCGCACGGTATCCCCGCAGCTGGAACAGCGCCGGCCCCAACAAGaccaAACCCAAGTCctccaagaaaacaaaggaagtcCAGAAAGACAAGGAAAGAGAAACAGATctgaatggagagagagaagacggTCCTGATCGGCCACAGGAGAGGTGTGCCACAGAAGTAGACCGacaggaagagggagagggcagCCCTGCAACACAGAAACCGGAGGAAACGCACGATCAGACTGCACACAACAGTGACCAAGAGGACACTGACCAAGAATGATGGTCAGGCAAATGATTTTGtacacaacaaaaagaaaccaaCCAGGAGTTTTAACTGctgctgatttgttttatttcttcttgaGCTCAATTGTCATAGAAGCAGGTTTctctcaattaatttaaactatagttattttgtaattactaattttttgttgtgtatatattatatatatatatattgtgacagtaTGTGGGGTTGAGTTTGGCGTCTAGGCTCCATGAccgaaataaatacaaaaaacaaacaaaaccctaaCTCTTTTTAAgcctaaatgtgaatatatatacgCATGCACCTGATATACACCTTAATTTCTTGACTTGTTTTATGatctaattataaaatataaagaatgtaATTCCAATATTTGTAGTAATTGTATcatcataattcataataaaaagtGTTAGATATGAATCTGACATTCATTAGTTTATATTTGAATCAGGTAAAATTGTGCAGCAAAATGTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014681 True 1518 mRNA 0.49 6 26859733 26866240

Neighbor

gene id symbol gene type direction distance location
AMCG00014677 LOC107600373,LOC107569583,LOC107690616,LOC107748609,LOC107731761,LOC107681305 coding upstream 231026 26624761 ~ 26628707 (+)
AMCG00014676 itgbl1,LOC107748609,LOC107690616,LOC107681304 coding upstream 271339 26585481 ~ 26588394 (+)
AMCG00014670 NA coding upstream 450642 26389232 ~ 26409091 (+)
AMCG00014669 LOC107748618 coding upstream 470510 26373224 ~ 26389223 (+)
AMCG00014668 pcca,LOC107654247 coding upstream 524372 26318031 ~ 26335361 (+)
AMCG00014682 cdc16,LOC106581643,LOC107673708,LOC107597489 coding downstream 2986 26869226 ~ 26881796 (+)
AMCG00014680 NA coding downstream 20247 26886487 ~ 26890130 (+)
AMCG00014684 upf3a coding downstream 24492 26890732 ~ 26900814 (+)
AMCG00014685 NA coding downstream 59594 26925834 ~ 26961877 (+)
AMCG00014683 asmtl coding downstream 100505 26966745 ~ 26974382 (+)
G71859 NA non-coding upstream 628168 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 848733 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 900031 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 1089244 25770209 ~ 25770489 (+)
G71772 NA non-coding upstream 1111325 25745803 ~ 25748408 (+)
G71963 NA non-coding downstream 86056 26952296 ~ 26953253 (+)
G71995 NA non-coding downstream 160535 27026775 ~ 27027272 (+)
G72072 NA non-coding downstream 608824 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 1374326 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 1431429 28297669 ~ 28300813 (+)
G71525 NA other upstream 4004087 22855342 ~ 22855646 (+)
G71004 NA other upstream 8585373 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 9372683 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 10390524 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 10720701 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 38637 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 969263 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 1002463 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 1436133 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 1930809 28797049 ~ 28837910 (+)

Expression


Co-expression Network