AMCG00014683 (asmtl)


Basic Information

Item Value
gene id AMCG00014683
gene name asmtl
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26966745 ~ 26974382 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014683
GGGTGGTGCTCACGGTCAGGCTCATTGCTGGCAGCTGTGTCATCAGCTGAATAGACCAATCACAATCGCACATCCCTCAGGCACCTGTGCTGGGATAGAGTGAGCAGCCTATCAGTGTGCAACTTCTTAAACAAACAATGGTAGGGGAAACTAGAACGAGAAAAATCCAAATCATTCAGTCCCAGCCTTCATAGCTATAACATTTACCACTTGtaatctgattatttttttgtgcgTTTCCATTAGTCTTCACAGGGACAAACAACACACCTCCCTCCGAGTTTGTCTTTCCTCAGATCTGCTGGGAAGTTTAAGTAACGTCAACATGGTACTGAACCCGGTGATCTCAAAATTAGGAGGAAAGCTGGTGGTCCTCGCAAGTGCCTCCCCAAGACGCCGGGAGATTCTGACCAATGTGGGCTTGAGATTTGAGGTTGTTCCTTCCTGGTTCAAAGAGACCCTGGAGAAGTCATTATTCAAAGCTCCCTATGAATATGCAGTGGAAACGGCAAAGCAGAAAGCCCTGGAAGTGGCCAGGCGGATGCCATTTACAGTTGATGGTTACATCCTGGAGAAGCCAGTTGACAAGGAAGATGCATACAGGATGCTTTCCAGGCTGAGTGGCAAGGAGCATAGCGTATTCACAGGGGTAGCAATCGTTCATTGCAATAGTGAATTGGGTAAAGAAGTGGAGTATgatgttgttgatttttatgAGGAAACTAAGGTGAAGTTTGCAGACCTCTCAGAAGACATGCTTTGGGAATACATCCACAGTGGTGAGCCAATGGATAAAGCAGGAGGCTATGGAATCCAGGCTCTGGGAGGAATGCTGGTGGAGTATGTTCACGGAGACTTTTTGAATGTGGTGGGCTTTCCACTGAATCATTTCTGCAAGAAGCTAGGAGAAATGTACAACCCCCCTTCCAAAAACGAAGTGAAACATATTCGATATGATTCCATCCCATATGTGGAGACATTTGACAGCCCCATTTACATGGAGAATGGATGGCCAAGGTGGGCGGAAAATAGAGCAGAGGCCAAGGACAGTAGAGATGGTGAAGGTCACTCGCACCATTGGactTTATTCACAGCCTCCAAACTCAAAGTTTTTGACTTGCTAGTGTCTCCGGGAGGTCTGACGGTGGCCGAAATGGCTGTCCAAATCCCAGCCTCCGTGATTGGAACGGAGCGCCTGCTGGACAGTGTTGTCTCGCTCGGCTTGCTGGAGAAGTCTCACCTGGGTGAATCCATAGtCTATAAGAATACAGAAGAGGCAAACCAGTACCTTGTGTCCTCCAGTAATTGCTCCCTCCATGGTTACATCATTTACTGCAATGACCGAATCTGGCCGCTGTTTACGCACCTGGAAGATGCCGTTCAGGAAGGAACTAACCAATTTGAGAGGGCCTTCGGGAAGAAGTCCAGTGAACTGTCTCGGGACTCCTGCCTCAGCGATAAGGAGATGAAGCTGCAGTTCATGAATGCCATGCACAGCATCGCCACAGTGACGGGAGCAGACATCGCGGCTGCCTTTGATCTCTCTCCGTTCAAAACGGCCTGTGATCTGGGAGGCTGCACAGGAGCCATGGCGTGCCAGTTTACAAAATTATATCCTAGCTTATCTGTCACCATCTTTGACTTGCCTGCCGTCGTAGAAATGAGAAGCCACTTCTGTACCCAGAGTGAAGACTTGAGTCGAGTTACATTTGCAGCTGGTGACTTTTTTAAAGATGATCTCCCCAAAGCAGACCTGTACATCCTTGCAAGAATTCTTCATGACTTGAcagatgataaaataaacatcctgTTAAGCAGGCTGTCACAGATGTGCTCTCCAGGATGTGGGCTGCTGGTAGCTGAAATTTTCCTGGATGAAGAGCAGAGAACCCCAAGCAGAGCTCTGCTACAGGCGCTCAGCATGTCTGATGGAAGACAGAGGAGCGCCTCACAATACAGCCAGATACTGAAGAAATATGGCTTCAATGAGATCTGTGTTAAACACACAGGAAACTTCCTAGATGCAATCCTTTGTGTGAAGCAGTGAAAGGTTatgaacacttttaaaatggaaGCTGAACCAGTAGTAATGTCTGGTTACAAGTGCTCTGCTTATGTGAGGATATTTTATTTACCAAATCTAGTatgatgattttgtttttacaatttgtgtatttatgatCCTCCCTGCTCTAACACTAagctgaataaaatgtatgaatgtttaCA

Function

symbol description
asmtl Predicted to enable nucleoside-triphosphate diphosphatase activity. Predicted to act upstream of or within methylation. Orthologous to human ASMTL (acetylserotonin O-methyltransferase like).

NR:

description
PREDICTED: N-acetylserotonin O-methyltransferase-like protein isoform X2

GO:

id name namespace
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014683 True 2229 mRNA 0.46 12 26966745 26974382

Neighbor

gene id symbol gene type direction distance location
AMCG00014685 NA coding upstream 4868 26925834 ~ 26961877 (+)
AMCG00014684 upf3a coding upstream 65931 26890732 ~ 26900814 (+)
AMCG00014680 NA coding upstream 76615 26886487 ~ 26890130 (+)
AMCG00014682 cdc16,LOC106581643,LOC107673708,LOC107597489 coding upstream 84949 26869226 ~ 26881796 (+)
AMCG00014681 NA coding upstream 100505 26859733 ~ 26866240 (+)
AMCG00014690 slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767 coding downstream 3053 26977435 ~ 26980300 (+)
AMCG00014691 ppp2r3b,LOC108426065,LOC106581654,LOC100705877 coding downstream 347232 27321614 ~ 27337656 (+)
AMCG00014701 NA coding downstream 508706 27483088 ~ 27491264 (+)
AMCG00014705 NA coding downstream 728702 27703084 ~ 27714268 (+)
AMCG00014706 NA coding downstream 869008 27843390 ~ 27861363 (+)
G71963 NA non-coding upstream 13492 26952296 ~ 26953253 (+)
G71859 NA non-coding upstream 735180 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 955745 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 1007043 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 1196256 25770209 ~ 25770489 (+)
G71995 NA non-coding downstream 52393 27026775 ~ 27027272 (+)
G72072 NA non-coding downstream 500682 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 1266184 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 1323287 28297669 ~ 28300813 (+)
G72208 NA non-coding downstream 1362909 28337291 ~ 28341717 (+)
AMCG00014687 NA other upstream 55508 26904877 ~ 26911237 (+)
G71525 NA other upstream 4111099 22855342 ~ 22855646 (+)
G71004 NA other upstream 8692385 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 9479695 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 10497536 16465621 ~ 16469209 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 861121 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 894321 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 1327991 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 1822667 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 2273493 29247875 ~ 29256354 (+)

Expression


Co-expression Network