AMCG00014690 (slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767)


Basic Information

Item Value
gene id AMCG00014690
gene name slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26977435 ~ 26980300 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014690
atgGCGGACCAAGCCATCTCTTTCGCTAAGGACTTCCTGGCCGGTGGAGTTGCTGCTGCCATATCTAAAACCGCAGTGGCACCCATAGAGAGAGTGAAACTGCTGCTGCAGGTCCAACATGCAAGTAAACAGATTGCAGCAGATAAACAGTACAAAGGCATCATCGACTGTGTGGTGCGCATCCCAAAGGAGCAGGGCTTCCTCTCGTACTGGCGCGGCAACTTGGCTAATGTAATCAGGTACTTCCCCACGCAGGCGCTCAACTTCGCCTTCAAGGACAAGTACAAGCAGGTGTTTCTGGGTGGCATAGACAAGCACACGCAGTTCTGGCGATACTTCGCAGGTAACTTGGCGTCTGGAGGGGCTGCCGGGGCCACCTCCCTCTGCTTTGTGTACCCTCTGGATTTTGCCCGAACCCGTCTAGCTGCCGACGTGGGCAAAGCCGGGGCCACAAGAGAATTCAAAGGGCTGGCTGACTGTCTGGTGAAAATCTCTAAGATAGATGGCATCAAGGGCTTGTACCAGGGCTTCAACGTGTCTGTGCAAGGGATCATCATCTACAGAGCGGCCTACTTTGGTATCTATGACACAGCTAAAGgtatGCTCCCAGACCCCAAGAACACCCACATCATTGTGAGCTGGATGATTGCGCAGAGTGTGACTGCAGTAGCTGGTGTGGTGTCTTACCCATTCGATACAGTGCGCCGTCGTATGATGATGCAGTCGGGACGTAAACAAGCGGATATCATGTACAGCGGAACAATTGACTGCTGGAAGAAGATCGCAAAAGACGAAGGTGGGAAAGCATTCTTCAAAGGGGCCCTGTCCAATGTCTTCCGAGGCATGGGGGGTGCTTTTGTGCTTGTCCTGTATGACGAATTCAAGAAATATGTCTAA

Function

symbol description
slc25a5 Predicted to enable ATP:ADP antiporter activity. Predicted to act upstream of or within mitochondrial ADP transmembrane transport and mitochondrial ATP transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in several structures, including bone element; eye; female organism; integument; and male organism. Orthologous to several human genes including SLC25A5 (solute carrier family 25 member 5).
slc25a6 Predicted to enable ATP:ADP antiporter activity. Predicted to act upstream of or within mitochondrial ADP transmembrane transport and mitochondrial ATP transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A6 (solute carrier family 25 member 6).

NR:

description
PREDICTED: ADP/ATP translocase 2-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K05863 SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014690 True 897 mRNA 0.52 4 26977435 26980300

Neighbor

gene id symbol gene type direction distance location
AMCG00014683 asmtl coding upstream 3053 26966745 ~ 26974382 (+)
AMCG00014685 NA coding upstream 15558 26925834 ~ 26961877 (+)
AMCG00014684 upf3a coding upstream 76621 26890732 ~ 26900814 (+)
AMCG00014680 NA coding upstream 87305 26886487 ~ 26890130 (+)
AMCG00014682 cdc16,LOC106581643,LOC107673708,LOC107597489 coding upstream 95639 26869226 ~ 26881796 (+)
AMCG00014691 ppp2r3b,LOC108426065,LOC106581654,LOC100705877 coding downstream 341314 27321614 ~ 27337656 (+)
AMCG00014701 NA coding downstream 502788 27483088 ~ 27491264 (+)
AMCG00014705 NA coding downstream 722784 27703084 ~ 27714268 (+)
AMCG00014706 NA coding downstream 863090 27843390 ~ 27861363 (+)
AMCG00014708 LOC106586788,LOC107081331 coding downstream 911551 27891851 ~ 27918923 (+)
G71963 NA non-coding upstream 24182 26952296 ~ 26953253 (+)
G71859 NA non-coding upstream 745870 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 966435 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 1017733 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 1206946 25770209 ~ 25770489 (+)
G71995 NA non-coding downstream 46475 27026775 ~ 27027272 (+)
G72072 NA non-coding downstream 494764 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 1260266 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 1317369 28297669 ~ 28300813 (+)
G72208 NA non-coding downstream 1356991 28337291 ~ 28341717 (+)
AMCG00014687 NA other upstream 66198 26904877 ~ 26911237 (+)
G71525 NA other upstream 4121789 22855342 ~ 22855646 (+)
G71004 NA other upstream 8703075 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 9490385 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 10508226 16465621 ~ 16469209 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 855203 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 888403 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 1322073 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 1816749 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 2267575 29247875 ~ 29256354 (+)

Expression


Co-expression Network