AMCG00014705


Basic Information

Item Value
gene id AMCG00014705
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27703084 ~ 27714268 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014705
GTCAGCGGGCCAGGATATCCCACCTTTGTGCTGGCTCTTATCTCGCTGATGTAGTAGGGGTGGGGCGCACAATGTTGGTCACAGACATCTGCAGGGTAAGGAAGCGTTACCACAGTAACTAAGTTATCTGTATCCTCCATGTATTTCCTAGCAGCTGAAGCAGAGAAATCTGGGCTGTAGTGGACTTGGGGAGGGGTTTGTCGGTTTGCCATTTTGGTGTGGGTGAAGCGCACCACACCGGAGTTTTGCCACAGTGGAAGCCTGCGTGAAGTTTGGGCTCCTGTGTTTGGATGCTGCTCTGTGGAGGCTGTGTCAGCGGGGCCATGCATCTGACTGTGGTTTGCGAAGTGAAAAGACTCTGCGGTGCCATGTGGCTACTATGGGTCTTAGGGATGTTCAGCTGGAGCTCACTGGCTGCTACACCTTCTCACACGACTGCCCCCCCAGCCCAAAAACGGCAACAGTACAGCTTCGGGAGGAGCTTTCTGGGGCTGGATAAATGCAACGCTTGTATCGGCACGTCCAGCTGTAAGAAATTCTTTAAAGAAGAAATCAGGTTTGAGAGATGGCTGTCTCCAAGACTGCAGTTACCACCCACCTTTAAGAAGAGCTACCCGGGGAACTACACAGACGACTCTGAAAGCTGGAGGCCGGTGATCATCTCCCGCCTCCTCTCCCACCACAAACATGAAGTCTCGGACAAGAGGATCTGCAGCTCAGCCACCCAGCGTCACCCCTGTAGCATCGAGGGCGTGCTGAGGAAGACCGAGAGGTTCCAGAGCCTGGCACACTCCAGCCTGCTCACCCCTCCCATGGTCCAGGGCTTGTCCAGTCCACTGCTGCGCTGCCCTTCACAGCGGCTCCTGGACCGGATTGTGAGGCGCTATGCAGAGGTCACAGATGCCGGGAGTGTTCAGATGAAGCACTTTGCGGAGCGTGATAAACTCAGACTGCTCTACACCCTCTCTGTCAATCAGCAGCCCATCATGTTACAGATATTCCCAGGAGCAGAAGGGTGGCCCTTTCCAAAGTACTATGGCTCCTGTGGAAGACTGATGGTGTCCGCCAGCACAAAGCCCATAAAGGAATTCTACGGCTCTTCTTTGGAGACTAGGGCTGACATTGCTTTCCAGCTCCTGCAAATCACGCAGTCTCTGAGGACCAACAGCCTTCACTTCTTCCTCTACTACACCACCGTCAGTGGTAGCATGTTTGGCACTTTTGAGGACGGAAGACTGTTCGTCACAGATGCCAGCACCATAGGAGTCATTGATAAGCAGGAAGGCATTCCTGCAGACGACAAGCAAAAGCCGGACCTCACCGATGTCTTCTCGTGTTTGAGTTTGAGCTGCAGGAGGCCGCCTCCTTGTTGGACGGTCAGGGAGTCACAGAGTTTAAACCTTATATGCAGGGACATCCTCCCCCAGCTGTTGATGCCAGCCAGGGATGAGGCTGTAGAGAAAGCCATAGGCAGGCAGTTACAGGTTTGCGGAGATGGGATGCTTCCAGACAACCGCATCATAGACGCTGCCAATGCACTAATGAGCCTCCTCAAACCAATGCGGCCTTGCAACCAGCACTTTAACTACAGATACCCGGAGTGCAGATACAGCCAGGAATTCTGATTGGCTCCACTGCGAAAATCTTCTGCAACGTTATTCGTAACGTGTCGAGGTTCAATTCACAGCCTGCTGCGTGCACATCCAGACACAGAGGAGAAAGATCTCTACAGTTAGGACTGTCATTCGAATGAAGGCACCATTGGCACACAGCCTTCTGGCCAGCAGGAGTCTCCGTTATGTATCTCAGTAAGTGATTTGCTGGAATTGCCCTTGGCCATGAGGGAGACCGGTGTGAATCTGAGGCAGAAGTCCACAGTGCAACAACCTACAGggcataaaaataaagacaatacattgaaaaatgcacaaaaccaccacaggaaacaaacaaatccataaaGAGACCGGATTTTGCCCATTTGTCTATGTCTAATTGAGAATGCATTGTGCCATTTTGACATGGTGGGGTATGGGCAGTGTAGCATTCTTCAAATCCAATCTCAGAGGGTCCAGGGaatcttctgcttttcattccaccCGAGCTGCATATTTAGCTGAAGTGACTATTCAATTCTCTGAAAAAGCCCTTCAGGTGAAGCTCTTCCTCATGTCTGATGCAGGTGCTGAGTTCAAGAGACCCAGAAGACCTGTTGTAATGGTAGCTTCCAATATGAACCAGGGGTAGTTTTTTTTGGTCCGGTCACCGTTTCACTTTAAAATTAGCTCGTCTGGTCACTGCTTGAAAAGGGACataagcttttaaataaattggcATTTCTGAACTAACCCgtttaaaaaaaacgaaaaaaaaaaaccttgggGAATTTTTCTAGCAAAATCAGTCGGACAATGGCTGTGGTTGAGTTCCTATGACATTTGTAAGACTCATGGCACTGTATTTTTGGCATTAACAATTAATATGCCCTTTGATCCCTTCCAACAgggagattaaaataaataaaaactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014705 True 2529 mRNA 0.50 6 27703084 27714268

Neighbor

gene id symbol gene type direction distance location
AMCG00014701 NA coding upstream 211820 27483088 ~ 27491264 (+)
AMCG00014691 ppp2r3b,LOC108426065,LOC106581654,LOC100705877 coding upstream 365428 27321614 ~ 27337656 (+)
AMCG00014690 slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767 coding upstream 722784 26977435 ~ 26980300 (+)
AMCG00014683 asmtl coding upstream 728702 26966745 ~ 26974382 (+)
AMCG00014685 NA coding upstream 741207 26925834 ~ 26961877 (+)
AMCG00014706 NA coding downstream 129122 27843390 ~ 27861363 (+)
AMCG00014708 LOC106586788,LOC107081331 coding downstream 177583 27891851 ~ 27918923 (+)
AMCG00014711 NA coding downstream 452765 28167033 ~ 28184530 (+)
AMCG00014709 cask coding downstream 508393 28222661 ~ 28235915 (+)
AMCG00014710 cask coding downstream 536658 28250926 ~ 28280724 (+)
G72072 NA non-coding upstream 223640 27475064 ~ 27479444 (+)
G71995 NA non-coding upstream 675812 27026775 ~ 27027272 (+)
G71963 NA non-coding upstream 749831 26952296 ~ 26953253 (+)
G71859 NA non-coding upstream 1471519 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 1692084 26010799 ~ 26011000 (+)
G72169 NA non-coding downstream 526298 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 583401 28297669 ~ 28300813 (+)
G72208 NA non-coding downstream 623023 28337291 ~ 28341717 (+)
G72273 NA non-coding downstream 812520 28526788 ~ 28578733 (+)
G72329 NA non-coding downstream 1117488 28831756 ~ 28831975 (+)
AMCG00014687 NA other upstream 791847 26904877 ~ 26911237 (+)
G71525 NA other upstream 4847438 22855342 ~ 22855646 (+)
G71004 NA other upstream 9428724 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 10216034 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 11233875 16465621 ~ 16469209 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 121235 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 154435 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 588105 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 1082781 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 1533607 29247875 ~ 29256354 (+)

Expression


Co-expression Network