AMCG00014706


Basic Information

Item Value
gene id AMCG00014706
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27843390 ~ 27861363 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014706
CTGCCCGCATGGCGCTGCCTCTGCTGCCGGGGAACTCCTTCAACAGAAATCTGGGAAAGGAGAAGTTCCACAAGTCCCAGCACTTTGATTATTCCAATGGCGTACCAATGTTGGTGGGTGCCAAGAAGCCTGGCATAGGGGGGGAGCTGCTGCTGGGTCAGAGTCTTCGCCCCGATTTCTCAGTGTATCCCAAGGGAGAGGGCAGTGCCAGCCCCGCCTATGTCGCCTTTGACAAACAGGTGCTGTGCTTTGACGCCTACTTCCAGGAGGATGTGCATGAGAAGCCAGAGGAGCCATACAGAATCAGGGAGTGCAAGATCTACTTCTACCTGGAGGATGACACCATAAAAGTGGTGGAACCAGAGGTTAAAAACAggACTCTGCTTCGGCGCCACCGCATCCCTCTCCCTCCGCCCAACGAGGACCAGTACTACACCGTCTATCACTTCAACATCAACCAGCAGATGGCGCTGTACTCCCGCATCTTCTCCATCACCGACTGCGACCTGTTCACCCGGAATTTCCTGAGGAAATTGGGGATGCGACTGAAGTCTCCTGCACCCACCCCAGAAGATCCCTACAGCATCCTACGCAGTAAGatGGAGGAAAGCATGAAGCCCCTGCGCCCATACGAGCGCGCTGACATAATGAAGCAGTTCATGGACCATGACCGGGAGGTCCTGCGCTTCTTCTGCCACTGGGATGACTCGGAGGCCATGTTTGGTGACGGTCACAAGCTCGTGCTGCACTACTTCCTGGCTGACGACACCATTGAGATCCTGGAGGTCCTTTCTGCTAATGCTGGGCGGGATGCTGCGCCCAAATTCCTCCACCGCAGCAAACTGCCCAAGCATGCACCCTCCACCAAGCGCCAGCCTGGTGAGACAACGGACCGCACCGTGCTCAATGTGTTTGGACCGATGGGACAGGGGGGCCGCTACATTCTGGATAGCCGGAAAACCGGCGCTGTTTATGAAGAGTTCTACAAGGACTGTGACCTGACCATAGGAGCGGTCATTAACGTGTGGGGGCGGAAAGTGGTCATCTGTGACTGTGACGGCTTCACCAAGGAGTATTACCGCACTAAATACGGCATCGAGGACTTTACACCAGTGAAGTACAAAGCCCCTCCCGTTCCTAAGAGAACGAGGCAGGTCCCGCCTTACAGTGGCTTCGGCTCTGAGGAGGACTCACTCTGCCTGGAGAGTAATGTGCTGCGATTTGTTGCCAAAATGGTCACCGACAATCCCATTGACAGCGAGAGGAAGTTCATCATCTCCTTTTTCCTTTGTGATGACACCATTTCTGTTTTCGAACCCCCCCAGAGGAACTCAGGCATGGTTGGGGGCAAGTTTCTGGAAAGGGGAAGGATTAAGAAGCCGGGGCAGGAGCAGTTTCAGAGCGATCTGTCGCAGTACTTCAAGGCGCAGGACCTGTATGTGGGAGCCAGAGTGATCTTCAACACACAGGAGTTCCAGCTGGTGGATGCTGATGAATATGCCTTTCACTACATGGAGCAGCATGCGGAGGAGTTCCCCAAGGCAAACATTGGGACCATTGTTAGCAAGCTAAAATCCTTATGCGAGTCCAGAATGAAGGAGATCAAGCAGGCCTTCAGGATGAATGACCCAGGGAACACTGGTGTGATTGCGTATGAACCATTCAGGAACCTGCTGGCTGAGGTTGCAGGTGACCAGCTGTCTGAGCATGAGATCATGGTGGTTGGGCGCCACTATGGTTCCCCAGAGACACCTGGGTCGGATCTGGGCTACCTGCTGTCCCTGGCCCAGGAGCAGCTGAGGAAGAAGCAGTTTGAAAGCTTCCAGCAAATGGTCGACTCCTTCGTGCACGATGACCAAGACAGGACTGGACTGTTGTCTGCTCAGAAATCCAGGACTATTTGCAAGGCCTTCAAACTTCCATTGGCTGATGATCTTCTGAGAGCCACCCTAGCAAAGTTTGCAAACGATAAAGAAGAAGTAGATTACGGTGCTTTCCTGTCAGCGATAAACTGGAGAGACAATCCAGCAccaacccctctctctcagtctcccAACAAGTATGACGTAGACTGGAGCGAAGAACCCACAGGCCCGGCAGTGAAAGGTATCAGCTATCCCATCTTAGTTGAAGATGTCTTTGGCAAACAGGATTAAAGGAGTCTGTCAAAGGACTGTCTCCTGCTGTTAACATTTTAGATGTACGCTTGTGAACTTGCTTTTCTGTGTCTTCAAGCTATGAGTGTCCCTAAATCCCCAAATAAAGATGAATAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014706 True 2276 mRNA 0.53 15 27843390 27861363

Neighbor

gene id symbol gene type direction distance location
AMCG00014705 NA coding upstream 129122 27703084 ~ 27714268 (+)
AMCG00014701 NA coding upstream 352126 27483088 ~ 27491264 (+)
AMCG00014691 ppp2r3b,LOC108426065,LOC106581654,LOC100705877 coding upstream 505734 27321614 ~ 27337656 (+)
AMCG00014690 slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767 coding upstream 863090 26977435 ~ 26980300 (+)
AMCG00014683 asmtl coding upstream 869008 26966745 ~ 26974382 (+)
AMCG00014708 LOC106586788,LOC107081331 coding downstream 30488 27891851 ~ 27918923 (+)
AMCG00014711 NA coding downstream 305670 28167033 ~ 28184530 (+)
AMCG00014709 cask coding downstream 361298 28222661 ~ 28235915 (+)
AMCG00014710 cask coding downstream 389563 28250926 ~ 28280724 (+)
AMCG00014714 rpl8,LOC107595836,LOC107748161 coding downstream 468434 28329797 ~ 28332468 (+)
G72072 NA non-coding upstream 363946 27475064 ~ 27479444 (+)
G71995 NA non-coding upstream 816118 27026775 ~ 27027272 (+)
G71963 NA non-coding upstream 890137 26952296 ~ 26953253 (+)
G71859 NA non-coding upstream 1611825 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 1832390 26010799 ~ 26011000 (+)
G72169 NA non-coding downstream 379203 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 436306 28297669 ~ 28300813 (+)
G72208 NA non-coding downstream 475928 28337291 ~ 28341717 (+)
G72273 NA non-coding downstream 665425 28526788 ~ 28578733 (+)
G72329 NA non-coding downstream 970393 28831756 ~ 28831975 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other upstream 1519 27835503 ~ 27841871 (+)
AMCG00014687 NA other upstream 932153 26904877 ~ 26911237 (+)
G71525 NA other upstream 4987744 22855342 ~ 22855646 (+)
G71004 NA other upstream 9569030 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 10356340 17364798 ~ 17487050 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 7340 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 441010 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 935686 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 1386512 29247875 ~ 29256354 (+)
AMCG00014738 NA other downstream 1406966 29268329 ~ 29279149 (+)

Expression


Co-expression Network