AMCG00014720


Basic Information

Item Value
gene id AMCG00014720
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28456195 ~ 28483850 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014720
CTCTTCAGCAGAAGTCAagtctgtgtttatttccCGTCCTCCGTCTCTCAGCTGCTGTCCCCCACCCATCGGGATCATGTGAGCAGCCGGCTCTGTGACTCAGCCTCTCAGGCTGTTTGTGCGCAATCCTGAGGCCGCCGACTTCAGCTGCTGAGCGGCTACTGCTGGAGTGGATGTCGAAACAGTTTGATGTATTTAgggttttaaaaaacacatttgtgtcaCGTTTTCTGTCATGGCTTGTTTGACGCAGCACCGGTTTGAAAATGGCAAATACAAAAACTGGTTGAAGACCACCATGAGCCTGCAGTTACTGAGGAGCAGCCTCGAAGACTTCTTGGAAAACGAAACGGAAACCTTTCACTCCCGGCTGCGGAGTAAACTGGAGGAGCGGGTCTGTGAGAGCCGGCCGCCCTGCGACTCCAGAGGCTGCGGACCCCAGCGCACCAAGGCTCCCCAGATGTGTGCTGCTTGTACAGATTGGAAAAATGAAATCCTTTCAAACCACAGTAGTGGTAAGGGGATTATCTACTGGAATAACTGTAAGCCACATCTTTGGTCGTCACAGAAATGGGAAGTTGCAAAGGTTTACATGCCCAGAGGAAACAAGAATCACAATAACGTGAAGCAGTTTGATATCTCTGCAATCCTGAACTTCATGAAATTCTGCTCACACTTCAAGCCGATGgTCACCAATGTGAGAAACCAGATGATGCACTCTGTCGACATGAAGGTGCCGACCGAGGACATGCTGGAACATCAGAACAAGATCTTGGAGCTGATTCAGCAGCTGCAGGCCCACGTGCAGCTTCCTGAGCTGGCCATGGTGGAGAAGGAGATTAAGGAGCTGCAGGAAATGGAATTCAACATTGTCTTCGGGGAGTTGGAACTGAGCTCTGGTATTCGTTCAGAAGGCAATGTCTGTGGTCCAGAATTCCTTCATACTTTACTGAATGCACAGAAGGTCCAGGACCTGGAGCAGCAGGTCCTGAAAGAGAAGATTGAATTCCTGGCTTCTCGTCTTGAGGAAGATGGAGATCTGCTTGCAAGCCATGAGGAGTTGTGTGCGATGAAGGCCTTCTTGGATCAGAACAAGGACCTGCTGGAGCAGCTGAGACCTCAGGTGGCCAAACTGGACTTTATTGAGAAGAAGGTGGAGCAGCACGACCAGCAGCTGAGCATCCTGGCCGTCAAATTGGATAGCCTGGAGAAAAAGACAGACGAAACCCAATACAGTGCTGAAACAGTCCGGTTCAAGAACCATCTTTTAGAACTGGCACAGAAGAATAGGTGGCCCACTCCCATTTTTCACGAAATCCGGGAACCAAAAGGTTTCAAGGGCGTAGTAGTGGTGAATGGACAGAGGTTCACCGGGGTGCTAGTCCACTCAAAAACCAAGTCTGCTCATCAGGAGGTGGCCAGGCTGGCGCTCGAATCTCTCCCTCAGCAGCCCTGCCCCGAGGACCAATCATCGGGACCCACACCCATGGACCTTGTCCAATCAGAGACCACATCTTCCACCACAGCCCCGGTGTTCTTCAGCAGTGTGACTGTGGTTCTGAACACAGAGGTTACTCTCTCAGAGGAGGATTGTGGGCAAGGGAATGCGGTGGAGGCAATTTACAAGAAATTAGCTGTCATGTTCGGCCTGGAAGTCTCTGCTGCAGggGGATCCTTTAAGCAGAAAGTCCAGGAATATTTCACTCAGGCTGGTTTCACACAACCGGAAGAAATACTCCAGACAAGCCCTGATGGAAAGATTAACTGCAAGCTAAAAATCTTTGGACCTTTCACCTTTCAATGCCAAGATGCTGCTACCAAAAAGAAGTTGGCTGAGCAACAGGCAGCTAAAGTTGCCCTCACCCAGCTTGCAGGGGTCCTAGGCTGGGATTGTGCCACAGAGGACAACTACAAAGGTACACTACAAGAACTGCTGGAGAGGAATGGCATGGACAAGCCCTCTTATAATGGGCTACCCAAGGACTCGGGCACACCTGGAGACACAACTGCCATTGCTCCTGTACTGCCCAGTGCAGCATCCCCTCAGCGCTCACACATTGATTCTCTGCAGCAGAAGCTGAAGGAGGAGCCAGTGACCCAACCTGTGAGCCAGCCGCCCGCCATGTCCTCTGcaaGCAGGCTATTCTTTGTAAGAGCAACGGTGAGTCTGAAGAAAGTGTTCGATCCCTACGAGACCCACAGCAAGAAGGAGCAGGCAGTCAAGGGAGCGTACAAGAAGCTGTCAGTGGCCTTTGGTCTGGCAGACCCCACCTCAGctGCTTCTTGTACCAGTGCCAAGAAGGTAGTACATGAATTCTTCACTAAGGCTGATTGGCAGCTCCCTGAGGAAATGTGTGAAGGCCCTGTAGATGGCAGCTTTACTTGCAAGCTGGACATCTCTGGAGactttacatttcacaatcaaGAGGGTGCCTCCAAAAAGCAACAGGCAGAACAGGGAGCAGCTAAAGAAGCTCTGTGTAGGCTGGCAGGGGTCCTTGAGTGGGACCCTGTTTGTATGGATGGCAACTATAAGGGGAGGCTTCAGGAGCTGCTAATGAAACAGGGGCAGCAGATACCTGTGTACCAGCAAGTCTCTGAGCATTGCGCTGCCACCCCTGTACCAGGCTGCCAAGTGTCTCCTGCTCTCGCCGCAGCCTCAGAGAACAGCAGGGCGGGAGGAGATGTGAGTCAGCCAGAGTCAGCCCTGGATTATGTTCCCATTGCAACACAGATTGCCCAGCCCAGCGAACTGCCTCCTCACAACAAAATGCCCAGAATCGAGTCTCCAGAGCTTCAGAAGCTTCTTGAGGTGTTGGGTCTGCGTCCACCCCAGGTGAACAGTCATGTGAGTGTGGAGAAGATGTTTGAGTACACAGTGAGTGTCCCCCTAGCAGGCCTTCTAGTCACAGCACAGGAAGCCAGTGGCTCAAAGAAGGAAGCTATCCGCAAGTCCTACCTGAAGCTTGGCCAGGGCCTGGGTCTCTGCGAAGCAGAAGAAACCAAGGCTACAATGATTGTGAAAGAGCATTTGAAGCAGCTTTCGTACAGCCTCCCCACTGAAGAGTTCTCCGAGACCGCAGGGAAGATGTTTTTTTGCCATCTGGGCGTGGCCTGCTATACTCTGACGAGTGCTGGGAAAGGACCTTGTGAGGATTCGGCCAAACATGAGGCTTCCAAGAAAGCCCTGGCCCAGCTTGCCCACCTTTTCGACTGGGATCTGGTTGCCAAAGTGGCAGATGGGGATGACGCAGTGGGGAGGATCACTACGCTGTTGCAGGGGGCGCAGCAGAAGCAGCCCACGTTCCTTCCCACCTCCACCCTGCACAAAGCCTCCGCTGAGCTGCACTTCAACACCTTCTCCCTGGAGAGCAAGGGGAGGGCAAATGTATCCAAGAAGTCAACACGCAACGCCATCAGCGCACGCATGCTCGGACTGCTGGGAGAGAGGGCAGAGTTAGATACAAGCAACAGCTACAGGAACATGGTCCAGGAGTGGTTTGATCAGAGAGGGTTGGAGCGGCCCCGGTACGAAGACACGCAAGAACAATTTGGGGCAAAGGTCACATTCTCAGCCACCTTGGAATGCTCCCCCTCAGATTGGCAGCCCAGCTGGGAGGAAGCTGATAAGAGGCTGGCTGAGGAGGTGCAGGCTCGTCTCAAGTACCTGGTTGAAGAGGGGAATGAAAAGtctctgtaatatttttaatggaataGCACAGAAGGAAAACTGGGCTGGTGTTAAGCCTGTTGCCCATGAGtcgcaaaatgttttttatgataTGGCAACAGGGGTATTGTGCAATGTAATCATGAATACATAAAAGTGATTTTCAACAGCTATACTTAAATcttacaaaacaacaattgtTTGGTAAATGTGTACTCTTTTAATGGATCAGATGTGCTTTCTCTGTCCTTAGAcaaggggttcccaatgtctggtgatggtgggccaatttccagaggttgcatgggatgggcgcagtagaaaatgaaccactggagaaaatgaaatatgtcccaaatcatacctttttatttcctatacatttatgttagggaacatttatgaactttaactgttgttttattatttccccccaaattacatgtgcaatttgtaacaaaatgttcagaaactgtaacaatatagtaaaggttcagaagaGGAGTGGGTTGAAGGTTGACTTTGGAGGGCCGCAacaaacatccttgagggccacatttggcccccggacagcactttgggaacccctgccttAGACATTCAATGTAATATCAGgatactatttattttctgttttttcatcaGTCAGTGGTTTAAGTCATATATGAAGAGAACGCAAATGTactcataaaataaaacctaagtTATGAACTTCTCACTTTTATCAGTGAATGTGATGTTTTGTAGCTTTATTCATGTACATGTATGGTTAAGTCATACTGTACCAGCATTAAGTAAATATGTGTTGAATCTCTTCACAGTGTGAAACAGTTCATACAGAAGACTGTCATATTAATAACTGAACATCAGCCTATGGACTGCCAGTGAAGTTAAGCTAGTGGCCAGTACATTTTAAGGCATTCATTTAtctataaaatgaataaataaaatacactgaaatcaGATGAATAACTGCAGTAAATAAGATACTGTACAATAGTAATTGTAGTCTATAGACTTTGTTTCAAGCTGTAAAAACTGGATTTCCcaagaaaagtaaaacataacCATGAAATTGACAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014720 True 4756 mRNA 0.49 22 28456195 28483850

Neighbor

gene id symbol gene type direction distance location
AMCG00014722 NA coding upstream 6088 28444976 ~ 28450107 (+)
AMCG00014721 med14,LOC106581951 coding upstream 14666 28407217 ~ 28441529 (+)
AMCG00014714 rpl8,LOC107595836,LOC107748161 coding upstream 123727 28329797 ~ 28332468 (+)
AMCG00014710 cask coding upstream 175471 28250926 ~ 28280724 (+)
AMCG00014709 cask coding upstream 220280 28222661 ~ 28235915 (+)
AMCG00014724 NA coding downstream 99619 28583469 ~ 28590960 (+)
AMCG00014723 NA coding downstream 107228 28591078 ~ 28609187 (+)
AMCG00014726 LOC103028151 coding downstream 211961 28695811 ~ 28766090 (+)
AMCG00014725 lrrc58,LOC106574305 coding downstream 283585 28767435 ~ 28779290 (+)
AMCG00014727 gsk3b,LOC107703010 coding downstream 398067 28881917 ~ 28890968 (+)
G72208 NA non-coding upstream 114478 28337291 ~ 28341717 (+)
G72173 NA non-coding upstream 155382 28297669 ~ 28300813 (+)
G72169 NA non-coding upstream 158711 28240566 ~ 28297484 (+)
G72072 NA non-coding upstream 976751 27475064 ~ 27479444 (+)
G71995 NA non-coding upstream 1428923 27026775 ~ 27027272 (+)
G72273 NA non-coding downstream 42938 28526788 ~ 28578733 (+)
G72329 NA non-coding downstream 347906 28831756 ~ 28831975 (+)
G72341 NA non-coding downstream 435126 28918976 ~ 28921290 (+)
G72353 NA non-coding downstream 497272 28981122 ~ 28985576 (+)
G72354 NA non-coding downstream 505757 28989607 ~ 28991299 (+)
G72175 LOC102776245 other upstream 152122 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 576395 27868703 ~ 27879800 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other upstream 614324 27835503 ~ 27841871 (+)
AMCG00014687 NA other upstream 1544958 26904877 ~ 26911237 (+)
G71525 NA other upstream 5600549 22855342 ~ 22855646 (+)
AMCG00014729 NA other downstream 313199 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 764025 29247875 ~ 29256354 (+)
AMCG00014738 NA other downstream 784479 29268329 ~ 29279149 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 1359617 29843467 ~ 29846586 (+)
G72605 NA other downstream 1367600 29851450 ~ 29851821 (+)

Expression


Co-expression Network