AMCG00014721 (med14,LOC106581951)


Basic Information

Item Value
gene id AMCG00014721
gene name med14,LOC106581951
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28407217 ~ 28441529 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014721
cacacacacacacacacacacacacgaccaGTCTCCCTTCACCACCACACTCGTATGCACCTTGTGAttggttgctgttgttgtaaCGCCGCTGTTTCAGTTCCGTATCCGGGTCTGCAGTTCCAGCGAATCTGTAATCACTTCCTGTCGGAGAGCAATGATGGCGGGGCTGAGATTGTGAGCTTTCGTTTTCTTTACTACAGTAATCATCAGGTATTCGCCGGGCAGATGCATGGGGCGAAGACACCTCGACCCCGCCAAGACGCACTTAAACACCAAAGGGACTGAGTGAAGCTTCCGAGGGTCTGTTCGTCTCCCCAGCCACCCGGGAAAAGTGAGAGTCGAGAGGTTTCTTCTCCTGTCTTCGCTTTCTAGCGCTAAGTGCCCGGggttttctagtttttttttttcttcaataaaatGGCTCCGGTGCAGATCGGCCCAGATGGCCAACTGGTGCCGACCGGGGGTCCCACCTCGGCACCGCAGCCCCCTCCTCCAGGGGCCCCCGCAGGGACTCCGGCGACACACGGGGTCCGGCTGAGCTTGCTGATTGAGTTTCTCCTGCAGAGGACCTACCATGAAATCACTCTACTGGCGGAGCTcCTTCCCAGGAAGACCGACATGGAGCGGAAAATCGAGATTGTGCAGTTTGCCAGCCGGACACGGCAGCTCTTCGTCCGCTTGCTGGCTCTGGTGAAGTGGGCCAGCAATGCAGGGAAGGTGGAGAAGTGTGCGATGATCTCTAGTTTCCTGGACCAGCAGGCCTTCCTGTTTGTGGACACTGCAGACCGGCTGGCGTCATTGGCAAGAGATGCCCTGGTCCACGCTCGCCTGCCCAGCTTTGCCATCCCCTTTGCCATCGATGTGCTGACCACTGGCTCCTACCCTCGTCTGCCTACCTGCATCAGGGACAAGATCATTCCTCCTGATCCCATCACCAAGGTGGAGAAGCAGTCCACCCTCAGCCAGCTCAACCAGATTCTCAGACACCGCCTGGTCACCACTGATCTGCCACCCCAGCTTGCCAACCTCACCGTAGCTAATGGGCGTGTGAAGTTCCGGGTGGAGGGCGAGTTCGAGGCCACCCTGACTGTGATGGGCGACGATCCAGACATTCCCTGGCGGCTTCTCAAACTGGAGGTCTTGGTGGAGGATAAGGAGACGGGAGATGGCCGGGCCCTGGTCCACAGCATGCAGATCAATTTCATCCACGAGCTGGTGCAGTCCAGGCTTTTTGCCGACGAGAAACCACTACAGGACATGTACAGCTGTTTGCATTCCTTCTGCCTGTCACTGCAGCTGGAGGTGCTGTACTCCCAGACCCTGATGCTGGTCCGCGAGCGCTGGGGTGACCTTGTTCAGGTGGAACGCTACACCCCTGCCAAGTGCCTCACTCTCTCCGTGTGGAATCAACAAATCTTGGGCAGGAGGACGGGCACTGCGTCGGTGCACAAGGTCCACATCAAGATTGACGAGGCTGATGGTTCCAAGCCCCTACAGATCTCCCACGAGCCCCCACTGCCAGCCTGCGACTCCAAGCTCATAGAGAGAGCCATGAAGATTGATCATCTGTCCGTGGAGAAGCTGTTGATAGACAGTGTTCACGCCCGCTCCCATCAGAAGCTGCAGGAGCTCAAAGCCATTCTGAAGAGTTACAACCCCGGTGATAACTCCTTCATTGAAACCGCTCTTCCCACTCTGGTCATTCCAATTCTGGAGCCCTGTGGGCGTTCTGAGTGTCTTCACATATTTGTTGACTTGCATTCAGGAATGTTCCAGCCAATGCTCTATGGAATCGAGCAGTCAACCTTGGACGACATTGAGAAATCCATCAACGACGACATGAAACGCATCATCTCCTGGCTGCAGCAGCTCAAGTTCTGGCTGGGCGAGCAGCGCTGCCGGCAGTCTGTGAAGCACCTCCCCACGGTGTGCTGTGACACCCTGCACCTCTCCAACGCAGCCTCTCACCCCACCGGCAGCCTTTCCAAACACCGCCTCTTCATCAGGCTAACACGCCTCCCGCAGTACTACATTGTGGTGGAGATGTTCGATGTCCCCAGCTGCCCCACGGAACTGGAGTACAAGTACTACTTCCTGTCGGTGAGCCTGCTGGAGGGCGAGGATGGCCCCCCCAGCGCCCAGCTCCTGCAGCAGTTTAAACCCAACCTGGAGGAGCTGGTCCTAAACACCACACCTGGCCGTGCAGCCAAACCAGGGGCCAAGAGGAAGTTATCTGGGGACCAGGGAGCCATAGAGCCCAAGAAACCCAAGCGCACAGGAGAGATGTGTGCCTTCAACAAGGTCCTGGCCCATCTTGTAGCCATGTGTGATACCAACATGCCCTTCATTGGCCTGCGATCTGAGCTGTCCAACATGGAGATTCCCCATCAGGGCGTGCAGGTGGAAGGTGATAGCTGCAGCCACGCAATTCGCATTCTCAAgatTCCCCCTGGAAAAGGCATCAGCGAGGAGACACGGAAGGTTCTGGAACGCTCCCTCCTAGACTGCACCTTCCGCCTCCAGGGCCGCAACAACCGCACTTGGGTGGCCGAGCTGGTTTTTGCCAACTGCCCCCTCACCAGTACCTCCAGCAAGGAGCAAGcCTCCACACGGCACGTTTACCTGACTTACGAGAACCCCCTGTCGGAGCCAGTGGGGGGGCGTAAGGTGGTGGAGACGTTCCTGAACGACTGGAACAGCATCGCCCAGCTTTACGAATGCGTCCTGGAGTTCGCACGCTCGCTGCCAGACATGCCCTCCTATTTAAGCCTCTTCTCCGAAATCCGCCTCTATAACTACCGCAAGCTAGTCCTGTGCTATGGCAGCACCAAGGGAAGCTCGATCACCATTCAGTGGAATTCAGTGACCCAGAGGTTCCACATCTCCCTGGGCACAGTGGGGCCCAACTCAGGCTGCAGTAACTGTCACAACATCATTTTGCACCAGCTGCAAGAGATGTTCAACAAGATACCTAACGtggtccagctcctccagGTGCTGTACGACACCCAAGCCCCACTCACCGCCATCAATAAACTGCCCACCGTGCCTATGTTGGGTCTGACCCAGAGGACCAACACGGCATACCAGTGCTTCTCCATCCTGCCCCAGTCGCCCACACACATCCGTCTGGCCTTCCGCAACATGTACTGCATCGACATCTACTGCCGCAGTCGGGGGGTGGTGGCCATCAGGGATGGGGCCTACAGCCTATTTGACAACACCAAGATTGTGGAGGGCTTCTACCCAGCACCAGGCCTCAAGACATTCCTCAACATGTTTGTGGACAGTAACCAGGACCCACGCCGGCGTTCTGTGAATGAAGACGACAACCCCCCCTCGCCTGTGGGGGTGGATGTGATGGATGCGCTGATGACCCAGCTGCAGACCCAGGCCTCTCAGGGGCAGCCGCAGCCGTTCGGGAAGCAGCCGGGAGGGGCTGGAGGCTATCCCATCACATCGCCGCCCGCCTCCTACCACGCAGGGGTGGCCCCTTCGCCTTCCATGATGCCCACACAGTCGCCAGGGAACATCCACGCAGCCAGCTCCCCTAGCGGTGCACTGCGGGCCCCCTCGCCGGCCTCGTTCGGCCCCACCCcgtctccctcctctctggggATTTCAATGGGGCAGACTTCCAACTTTGCCAGTCCGCACGgCACTCTGGACCCCAGCTCTCCCTACGCCATGATGTCTCCCAGCCAGCGCACGGGAACGTGGCCGGGCTCCCCACAGGTGTCCGGCCCCTCGCCTGCAGCACGCATGCCTGGGATGTCTCCAGCCAACCCCTCCCTGCACTCGCCCATTCCCGATGCCTCTCATTCTCCCCGTGCTGGAACCAgtTCCCAGACGATGCCCACGAACATGCCTCCGCCTCGAAAACTACCTCAGCGCTCCTGGGCGGCCTCCATCCCCACCATCCTAACCAACAGTGCCTTGCACGTCCTACTGCTGCCCTCACCCACGCCCTGCCTGGTTCCTGGCCTGGCGGGCAGCTACCTGTGCTCCCCGCTGGAGAGGTTCCTGGGCTCGCTCCAGATCTTGAACTCCAGCGAGCCGGGGGTCATTACATTCAAGACAGAGGTGCTGAAGTGCCGAGTGGCGCTTAACCCCAAGACCTACCAGACCCTGCAGCTGAAGGTGACCCCGGAGAACACTGGGCCCTGGTCCCAGGAGGAGCTGCAGGTCCTGGAGAAGTTCTTTGAGACGCGGGTTGCAGGCCCACCCTTTAAGTACAATACACTAAATGCCTTCACCAAGCTACTGGGGGCTCCCACCCACATCCTCAGGGACTGTGTGCGCATCATGAAGCTTGAGCTGTTCCCAGACCAGGCCAACCAGCTGAAGTGGAATGTGCAGTTCTGTCTGACCATCCCACCCAGCGCGCCTCCGATCGCTCCTCCTGGGACCATCGCCGTAGTGCTCAAATCCAAAATGCTGTTCTTCCTCCAGCTGACCCAGAGGCTGCCCGTACCCCAGGAGCCCATCAGCATCATCGTGCCCATCGTGTACGACATGGCCACAGGCCTCACGCAGCAGGCCGACATCCCGCGCCAGCAGAGCTCCTCGGGGGCGGCCGCGCTCATGGTCAGCAGCATCCTCAAGAGGTTCAACGAGATGCACCCCCCGCGCCCGAGTGAATGCACAATATTTGCATCAGTTCATGAACTCATGGCAAATCTCTCACTGCCCCCCGGTGGACGGCCATAGCAGCGCATCTCTGGGTCTTCAAAACCACATGGAGGGTGTAATTCTGCAGTGAACCGTGGAATCCAGCACACTGGCAGACTAAATCCAGTCTGACATTTCTCCTCAAACCACAGTTTTTGGACTTAGCTGACTCTGGTGGACATGTTTCcactgaagaaaaaattaaaaagggagTGCTAAAGAGTGAccatcaaacactttttttaaatgaagaaagaaaaacaaacactcaatCTATGGACTACAGGCAGACACATTCCCTTGGGGGAATCCAatcataaattattttaaagagctAAACAAAAactatggatttattttttcagagatGCACTTcttaaataataactaaaataaaatgtaataaaagatgAGAGGTTTGTTTACCTGCAgttgtacattgttttataaGCAGAATTTTGAGGCAAATGGCAGAAACTCTTTGCAAGAAACTTTATTCaactttcttcttctcttttgttttataCTGCAAGAAACCAATTTTATTGAGGTATTGAAGATGCATACTTTGTTAGTActtgtaaatgtgtatttttattttctctttttgatGTCTTGGCTTAAATTCAACTCTTTTCAGTTAAGCCCGTCACTTTGAATACTGTAAAACTGTGACAAACTTTATAATTAAGCCGTATTTTATTATGACTGCTTTGGAGTCTTTCCAGAAGAATCTGAGACATGTTGTCTAGGTCTCTGATAAATACTat

Function

symbol description
med14 Predicted to enable transcription coregulator activity. Acts upstream of or within animal organ development; blood vessel morphogenesis; and stem cell population maintenance. Predicted to be located in nucleus. Predicted to be part of core mediator complex and mediator complex. Is expressed in head and trunk. Orthologous to human MED14 (mediator complex subunit 14).

NR:

description
PREDICTED: mediator of RNA polymerase II transcription subunit 14 isoform X1

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0016592 mediator complex cellular_component

KEGG:

id description
K15156 MED14, RGR1; mediator of RNA polymerase II transcription subunit 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014721 True 5447 mRNA 0.55 31 28407217 28441529

Neighbor

gene id symbol gene type direction distance location
AMCG00014714 rpl8,LOC107595836,LOC107748161 coding upstream 74749 28329797 ~ 28332468 (+)
AMCG00014710 cask coding upstream 126493 28250926 ~ 28280724 (+)
AMCG00014709 cask coding upstream 171302 28222661 ~ 28235915 (+)
AMCG00014711 NA coding upstream 222687 28167033 ~ 28184530 (+)
AMCG00014708 LOC106586788,LOC107081331 coding upstream 488294 27891851 ~ 27918923 (+)
AMCG00014722 NA coding downstream 3447 28444976 ~ 28450107 (+)
AMCG00014720 NA coding downstream 14666 28456195 ~ 28483850 (+)
AMCG00014724 NA coding downstream 141940 28583469 ~ 28590960 (+)
AMCG00014723 NA coding downstream 149549 28591078 ~ 28609187 (+)
AMCG00014726 LOC103028151 coding downstream 254282 28695811 ~ 28766090 (+)
G72208 NA non-coding upstream 65500 28337291 ~ 28341717 (+)
G72173 NA non-coding upstream 106404 28297669 ~ 28300813 (+)
G72169 NA non-coding upstream 109733 28240566 ~ 28297484 (+)
G72072 NA non-coding upstream 927773 27475064 ~ 27479444 (+)
G71995 NA non-coding upstream 1379945 27026775 ~ 27027272 (+)
G72273 NA non-coding downstream 85259 28526788 ~ 28578733 (+)
G72329 NA non-coding downstream 390227 28831756 ~ 28831975 (+)
G72341 NA non-coding downstream 477447 28918976 ~ 28921290 (+)
G72353 NA non-coding downstream 539593 28981122 ~ 28985576 (+)
G72354 NA non-coding downstream 548078 28989607 ~ 28991299 (+)
G72175 LOC102776245 other upstream 103144 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 527417 27868703 ~ 27879800 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other upstream 565346 27835503 ~ 27841871 (+)
AMCG00014687 NA other upstream 1495980 26904877 ~ 26911237 (+)
G71525 NA other upstream 5551571 22855342 ~ 22855646 (+)
AMCG00014729 NA other downstream 355520 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 806346 29247875 ~ 29256354 (+)
AMCG00014738 NA other downstream 826800 29268329 ~ 29279149 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 1401938 29843467 ~ 29846586 (+)
G72605 NA other downstream 1409921 29851450 ~ 29851821 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_03313112_03329470 MED14 coding CI01000009 null 3313112 ~ 3329510 (+)