AMCG00014726 (LOC103028151)


Basic Information

Item Value
gene id AMCG00014726
gene name LOC103028151
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28695811 ~ 28766090 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014726
GGACCAGATGGCAGCGCCAGGAAGCTAAAACCTCCAGTGCACAGTGTCTCCAGCAGGCCGGGCTTCACCGCACATACTTTGTTCAGTCAGCATCTTCAACTGACTGTGAGCGGAAGCGACATGAGACGGGCCTCCGAGAACAGAACGAATGGCATGAAAAATGACAGCAAGCCGACCCCCTGGGAGAAAtatccctccccccctccaGCACGCGGTTCAGGGGATCGCAATGCAGTGGGCCTGAATTTGATCAAGGATATGTGGGAGAGAACGGCAGAGATAGGTGGTGAGAGGACCTCTCCCAAGGTCCGTCACGCCATGAAGAGGAGCCAGCTGGAAACCTGCACGAGATCCTACATCACAAGGGGTGTGCCACCCGGAGGAATGTTGAAAAGTAtccctgtgtgtgtcctgcTGGCCATCGCCTGCTGTCATGCTGAGAAGAAGGAGGCTCTCACAGAACACATCCGCTCTGAAAGTACAGAGGATAGATCGCCTGGCTATGTTCCCGAAGAGGCCCTAGGAGTGTTGCACAGCAAGAGACGTGCAATGTGCAAcTTTAATGAGCTTCTGACAGTGCTATCTAATGATGATGTTCAAAGAGATGAGGGCCACATGGGCAGCAGAGGAGCCACAGGAACTATACACTTCTCAGAAGGCATGTTCGCTCTTTCTGCGGCCAAGAGCCCAGCAGAATCAACACCAATTTACACCAATCTAATCGGAGTCATCAAAATCTCCCAAGTCATCGAGATTCGTTCTCAGATCAATCCGGGAGCCATGCTGAGGAATATAGAGATAGTGAATCAGAATGACCCAGCATCGTTTGGAGAGCAGCAATTAAACCGAAAGGAACAGCTGCTGTGTCTTGAAAAAGAGACTGATTTGATGCAGGAGGTGAAGAGCAAGTCCAAGATCTGTGCCAATGTGTTCTGTGGGGCCGGCAGGGAGTGTGCCGTGACTGAGAAGGGAGAACCTACCTGCCTGTGCATTGAGACCTACCGCAACCACTGTGAGCTTCACCGTGATGCCTGTCTGACTGGGCTGAAGATCCAGGTTGCCCATGATGGTCATTGTGAAGagAAGAAGACTGAGAAAATAGCTGCAAGCCCAATTGTGTGCTACCTCGCCGATCGCAACGAGCTGCGCAGCCGTGTCATCGAGTGGCTGCAGACCGAAGTGGTTCCTGATGGTTGGTTCTCCCAGGGCTCCAACTACTCCGACATCCTTTACAGATATTTCAAGAGCTACGACAATGGTGACAACTACCTGGACTCAGCCGAACTCCTGAAATTCATTCAGCACAACGAGACCGTTGTTAACATCTCCTCCTACATGGACGAGGAAAATAACCGCCTGCTCCGgaGCCTGTGTGTGGATGCCCTCATTGAGCTTTCAGATGAAAACGCTGACTGGAAACTGAGCTTTAACGAGTTCCTCAACTGCCTCAAGCCTGGGTTCAACCCTCCAGAGAAGAAGTGTGCCCTTGAGGACGAGACCTATGACGATGGCGCGGAGACACAGGTGGAGTGTAACAGCTGTGTGTGCGCCTGTGGAAACTGGGTGTGCACTGCCATGACGTGCAGTGGTAAAGATAAGCAGGCCGCCCCCGTGGTGGACGATGAGCAGGACGAGATGACCGAGGAGGAATGGACCAGGCATGTGTCAGAGCTCAACAAACACCAGGAAACCGTGGAGAAGACCAAGAAAGCAACTACAAAGGACATATAAGAAGGCTTgcaaaggaagaagaaaaagtaaaatgaaaaaactcCAATCATACCTTCCTTTCCTCAAGAAGTGCAGGCCGGCGCTTGAATCTCGTACTGTTGCTAAAAGAATTACctagtactttttttttttttttttatcattattattgtattatgttggtttgttcgtttttttcaTTCGTTATCAATGGGGTAATAATCCACAACTTGTGTTCTGTGTAAAGTGTTGTATTCTTTTTGATGGAATCACTTGGTGCTGAGGTGTGAGATCCATCGACCAGATGacagttgtttgttgttgttgtttttttaaactgccgTAAATTTAAACACTACAAGTGAGGTGGGGAGATGGAGGACCATCGCACAATTAGGAATGCCATCTTAGTTTCCTGCTGCTTTGCATGATCGGATACCGATTTTCTACTGCACCATACATTTCCTACTAAGTAATAGCGCATGTTGTGTATAGTGACTTATACAGTATGTTTGCCATGAAAAGCAACAGTCTCCTACATATTAGAAGAAAGCTAATATAATTTCTGTCAAagaatttagttttaaacattataactTCCCATAAATCAGTCAATCGTGCACGTCAAGAACAGGTCTGTTGTTAGGCTAGAGgcataaatatactttttaaaagaatgaCCTGGTAGCCGATAAAATCAAGGTGATCTGAATTGCGGACACAGTCAACTGAGTAACCACCTACTTTACATTCCTTATTCAGATGTATCCTAACCagcaaaattaatcaaaataatgtagAATCTAGAATAATCTAAAATTGTGTATCTACATATAAAaggaaattgtattaaaatgcttaGGCTTAAATGCTCAATACTGTAAATTAGCCAGTACTGTACCAGTTACCATGTCTAAATACACTGTATGTCAATTGAAGACTAAAGACATTAGGTTGACGTGGACTTGGCAGGATGGAAGACGCAGCAAAACCAAATATTAAGCATTTGCAGAGAAAATGTATGGAGAAGCAAGCAGACACGTTCTGCCTGGGTTTGTTGCCTTCAGGGAGCAGATCTGTAGGATTAGATTGAAGCATTGACAGATTGGGAGAGATCTAAAACGTCTCTGTTCACACATCTTCAGGGCCGGTGGTTATGCTCTGGCTGACTCCCATGACAGATGCAAGTTCAAGTACTACTAAAACCTACGCTGACATCCATTGCTCTGTCGGTTATATAGTTCATGCAGAGTTATTCGCAGTTCTTCCCTGTCACTTACAATGGCACATGTTTCACGAAGGTGcgatttctttttttcttacactttgatagtatttttgcatttatttttataattttgtagtAGTCTtcgtattttatttaaattggattGTAACTCAGATGGCAATCTTAAGCAAGTACAGTACAAATGCCTACTGTTTTACACCACAAAAGGGGGCATAGTTACAAAGAATGAAAACTGCCACAGTTATGCTTTATGAACCTACCTGCTAGGGTTGTCTGGCtgtattgctttgtatttcaaaCACTTTCCACTTGTTTTATCCACATACAGTGTTACAAGGTGTTGATTGATTTAGGCTCATAGCTACCATTACTTTTTGTCAGCTTTTGCGTCATTCTTTGTGTTCAGTCAAGGCTGTTTAGTCATTTGTCACATCACACAGATGTCAGTGTATTGGGATCACATACTACACAAATGAATGGTTTTCGGTACCTGCTTTTTAAAACCCTTCATCTGCTGTATGTTGCTTCCCGAGTatgacagaaaagaaagaatgtgGGTAAAGAAAAGGGAAACGGACAGAGAGAATCCAAGTGTGAGTTTGGGGATATTTCCTGTGAGTTTGCAAGTACTGAATTGTCTGTCTTGGGGGGTCAAGAGATGGGCACCAAAGAGCTGAACCAGTGTAGGAATGGAAAAAGAGTTGAGACATTGAAACCAAAGCCTGCCATGAGAAGCTGATTGATGTTGTGTAACTCCTCCGGGTAATGCATTACTCTGGACCCAGCAACTacaaaataccttttatttcaatatatatcagTGGATTAGAATCAGTATCAACTCTATAGCATAGATATTTTACGTTGTTAAACTTTACGTTGGATGATTCTACTAATGCATTGTGTATACCATGTGCAGTATCAGTGCcttaaaagaataaagaaaaatcaaaggCTGTTTTAAAGTTCATGACTGAAAAACACCTTAAAATACAACATCTACATCTACAGCTACATGCACGATGGATGTTGGTCCATCTAGCGTTTGAATACAACTTCGGATTGAAAACAGCACAGATATATTTGGCAGTATTACCTTGTACTAGTTGAACTTgactttgatttgtttgtttgattgtttttgtcatgtgaccagcatttaaaccattttgtatTCTTGTAAAGGTTATCACTAGTTTGTTTACTCacttttttgtattcctactgTGTCTTACAGGTATCTGGGGTATACAtgccaataaaaaaatctacaaaaccCATAA

Function

NR:

description
follistatin-related protein 1-like

GO:

id name namespace
GO:0030510 regulation of BMP signaling pathway biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0060034 notochord cell differentiation biological_process
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K23912 FSTL1; follistatin-related protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014726 True 4242 mRNA 0.43 21 28695811 28766090

Neighbor

gene id symbol gene type direction distance location
AMCG00014723 NA coding upstream 86624 28591078 ~ 28609187 (+)
AMCG00014724 NA coding upstream 104851 28583469 ~ 28590960 (+)
AMCG00014720 NA coding upstream 211961 28456195 ~ 28483850 (+)
AMCG00014722 NA coding upstream 245704 28444976 ~ 28450107 (+)
AMCG00014721 med14,LOC106581951 coding upstream 254282 28407217 ~ 28441529 (+)
AMCG00014725 lrrc58,LOC106574305 coding downstream 1345 28767435 ~ 28779290 (+)
AMCG00014727 gsk3b,LOC107703010 coding downstream 115827 28881917 ~ 28890968 (+)
AMCG00014728 gsk3b,LOC107559500,LOC107721573,LOC107551994,LOC107715908 coding downstream 139811 28905901 ~ 28916634 (+)
AMCG00014734 NA coding downstream 330039 29096129 ~ 29110638 (+)
AMCG00014733 NA coding downstream 354861 29120951 ~ 29129042 (+)
G72273 NA non-coding upstream 117078 28526788 ~ 28578733 (+)
G72208 NA non-coding upstream 354094 28337291 ~ 28341717 (+)
G72173 NA non-coding upstream 394998 28297669 ~ 28300813 (+)
G72169 NA non-coding upstream 398327 28240566 ~ 28297484 (+)
G72072 NA non-coding upstream 1216367 27475064 ~ 27479444 (+)
G72329 NA non-coding downstream 65666 28831756 ~ 28831975 (+)
G72341 NA non-coding downstream 152886 28918976 ~ 28921290 (+)
G72353 NA non-coding downstream 215032 28981122 ~ 28985576 (+)
G72354 NA non-coding downstream 223517 28989607 ~ 28991299 (+)
G72409 NA non-coding downstream 371039 29137129 ~ 29137353 (+)
G72175 LOC102776245 other upstream 391738 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 816011 27868703 ~ 27879800 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other upstream 853940 27835503 ~ 27841871 (+)
AMCG00014687 NA other upstream 1784574 26904877 ~ 26911237 (+)
G71525 NA other upstream 5840165 22855342 ~ 22855646 (+)
AMCG00014729 NA other downstream 30959 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 481785 29247875 ~ 29256354 (+)
AMCG00014738 NA other downstream 502239 29268329 ~ 29279149 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 1077377 29843467 ~ 29846586 (+)
G72605 NA other downstream 1085360 29851450 ~ 29851821 (+)

Expression


Co-expression Network