AMCG00014735


Basic Information

Item Value
gene id AMCG00014735
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29351748 ~ 29383448 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014735
ATGGACGCCAAGTACTCCGCCATCTTCGACTCCAGCAGCAACCACAGCCGACTTGCGTTCTACGTCATCAACGAAAGAGTCCCGCGCAAGTGCGTTGTTCGAAAGGAGGCCGAGAAGGTTGAATTCGTCATCGTTTTTGGAGAGAAGGAACATCTACCGTCGACACAAGAGGTCGTTATTACAGCAGTTGTGACCGCTATATTCCCAACGAACAGACAGAAACCAAAGGAGCTCAAGTGCTACTCAGTGTAATCAAACAGAAGCAATGAGAGCCCCAGCAATAAAAGCACTACCACAGgtgTTTCTTTAAATGACAAAGTTGAAATACAATGGATAATCTATTTTTACATATGTGCTGCAGTCGTGACTTTCATCGTAATTGTGGTGATCATATCATTTTACTGCTTGCATGCAAACAAAGCATCCCCAGGGCAGAAGGATGCAGTTCAACAAAAGAAGCAGCTAAGGACAACAGTGTCCAGCACTGCTCCTGGAGGCCTCTCAATGTGTGCAGCACCAAAATCGCCTTGCATCAGCACAAGGCCACCGAGTGTCCCTGAGCGGACAAGAAGCATTCGATCTCAACCAGCAGGCCGTCACAGCGAGCCTAGCACAGTGTACGACAACGACAACCTCCGAAGGAAATCCCGGAGGAAACAGACTGCTTCCAATGGGGCTCCAAAAGCTGGCCGGAATGAGCCCAACCAGGTGTCCATTGTGATACAGACCTCTGATATCTACGACAACGTGGAGCAGGAGACGGAGGGGGATTCTTTCACCCTCGTGTACGCCGCCTTGAACCACAACAGCGAGGACTGCCCAGTGCGGACTTCGGCCCCCATGGATGACTACACAGAGTATGCTGCCATACGCGTCTGTCCGTGAGGCGTCCTCTTGTCCAGAGCTGAGACATCATACCATTTCCAAGGTGCAAAATGAAGAAGAACTGGAGTCACAGATCTACTGCTAGCTGTTCTCATGAAGGCACCATTTTGTACGCTTTCCCACTATTGTACGCATCAATGGTGCTGACTGCAAGACACTTCGTGCTGGGCCATTGCAAATAACCTCTGCTATTTTTGTGGCCCATTTATTACTTGTTTCTTGAGTTGTGAATGGGCTGAGACACTTCTAGGATTCAGCATTTGTTCCTCATAAGTTGCAGAAAGCAAGACTTAAAAGCTTGTTAGTAGAGACAAACAGTTGACATGGCCTATGGAGAATTGTTGCTGGGTTACATTGATTCTGCTTCGACCTGTATTGGTTAGATATGGCCACCTGTAGGGCAGTTGGCCATTGGAGATATGTCCATCAGAAAGCCTCAGAATACAGCAGAACTAATGATCAGAAATGGGTATGGAAAGCATGTGCATAAAGCCTTAATCAAGGAAGAGCACAACACAGGACAAAAGAAACACACTGTCCCAAATGATGTCTCCAGTTAGTGCCTTTACAATCatgtcacatttttatataatgaaaactgttatttttattactgtagTCTCTTGAATTTAAATGGTCCTGGTCAGGCGTCATTGTTTATAAACTTGTTACTGCTTAGAAACCTGATAAACCTGTCAGTACTAACTAATAAGTATATTTTGCTTTCTTAGAATTGCACATTACAAGCCAGATGGCAGGAAATGAGCAGGTGAGGTTGGTGATGTGTTGTGTGACTCTTTTAGCTCCTGACACTTTTAAACATCTGTGACTGCAGGAGAAAGGGATCTATGAATGTGGGCctatgaaaaaacacacaatttcctTTTGGCTCTTGTTCTATAGAAACTGAGgttcttttattttatgatttaaaagtcaaagtcagcagtgcaattttattttatttatttgtttttttccaatgtaaAGCTTTGTGGAATGCGGCTTAAGACGTTCCTGAGCAGTGGTCTGAGGAAACAAtatcacaaaagaaaagaaaaaaacaatgcagttaACTATGATTTTCATTGTCAGACCTTGCACACTTTGTTCTTGAAAGAGGAGGCTTAGGGAGGAAggtggttatttttttttcttgtctcaCATAAACAGATGTAGAAGAAAAAGTGAACCCGTAGGCCTACAGCAAACAcatattcacaaaataaaaggcatCTGTTGTATTGTCTCATTTGAGgtgaaccaaaataaaattTCAGTCACTTCAAAGAGACAGGGTGTCGGCCGTTAATTTAACCACTGACCAGAGGTGACACCAGAGAAGATGCATTCGTGTTTGTTGCTAAGCAGTATCTTGCATAACACcttaacattaacaacacaatcTTTTCACAATAAGGCAGaacatgtttcctttttttaagcaactgaaaacaaacagtcCACAGTCCTGTTTTGTAGAGTGTTTACAttattgttgtagttttttcGACATTgcttgaatgtttattttatgcctGTGTTATACAGGCTTTTGCTATAATCCTACTAAACCTGGCTAAGGTTCTATTTTATCAAAAGTTCTATCGTAAGCGAGATAGAAAGGTAAATTGCTGTTGTCAGGGCAACAagcattataataaaaacataatgattGTGGATTAGTTTCATGGTAtgttatagtatatatatatatatatatatatata

Function

GO: NA

KEGG:

id description
ko04660 T cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014735 True 2615 mRNA 0.42 6 29351748 29383448

Neighbor

gene id symbol gene type direction distance location
AMCG00014732 NA coding downstream 319840 29023778 ~ 29031908 (-)
AMCG00014731 NA coding downstream 338693 28995936 ~ 29013055 (-)
AMCG00014730 NA coding downstream 400396 28930365 ~ 28951352 (-)
AMCG00014718 NA coding downstream 856722 28494507 ~ 28495026 (-)
AMCG00014719 NA coding downstream 857262 28494106 ~ 28494486 (-)
AMCG00014742 sik1,LOC105911651 coding upstream 70594 29454042 ~ 29463876 (-)
AMCG00014744 NA coding upstream 106617 29490065 ~ 29507061 (-)
AMCG00014748 eif5b,LOC107567794 coding upstream 232073 29615521 ~ 29643703 (-)
AMCG00014750 NA coding upstream 266990 29650438 ~ 29651309 (-)
AMCG00014749 NA coding upstream 274825 29658273 ~ 29659385 (-)
G72472 NA non-coding downstream 94 29350078 ~ 29351654 (-)
G72438 NA non-coding downstream 133715 29217780 ~ 29218033 (-)
G72423 NA non-coding downstream 162704 29188690 ~ 29189044 (-)
G72414 NA non-coding downstream 204580 29146843 ~ 29147168 (-)
G72370 NA non-coding downstream 357398 28925630 ~ 28994350 (-)
G72495 NA non-coding upstream 37812 29421260 ~ 29423372 (-)
G72535 NA non-coding upstream 177090 29560538 ~ 29562066 (-)
G72530 txndc9,LOC107568936,LOC107668903,LOC106586783 non-coding upstream 264140 29647588 ~ 29649642 (-)
G72581 NA non-coding upstream 355759 29739207 ~ 29743212 (-)
G72629 NA non-coding upstream 563269 29946717 ~ 29947061 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 1019266 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 1982221 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 2047151 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 7106833 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 10126518 19217722 ~ 19225230 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 5842 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 1458075 30841523 ~ 30846800 (-)
G73047 NA other upstream 2879719 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 3071858 32455306 ~ 32555945 (-)
G73127 NA other upstream 3214014 32597462 ~ 32619149 (-)

Expression


Co-expression Network