AMCG00014746 (rev1)


Basic Information

Item Value
gene id AMCG00014746
gene name rev1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29588801 ~ 29614037 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014746
CAGATATTTCAGTATGAGTCGAGGTGGATGGAGGAAGAGAGCTAGTGACGATGACGGTTGGGGAAGCATgGGTGGGTATATGGCCGCCAAGGTCTGCAAACTAGAGGAGCAATTCAAACTCGATGCCCCTCGGCAGCAGCAGAAGGAAGGGACCTGCTCCAATATCTTCAGCGGCGTGGCGATTTACGTCAACGGTTACACTGACCCCACAGCGGATGAACTGCGCAGGCTGATGATGCTCCACGGAGGCCAGTTCCACATGTACTACTCCCGCTCCAAAACCACGCACATCATCGCCACCAACCTGCCCAACACCAAGATCAAGGAGCTCAAGGGGGAGAAGGTAGTACGGCCTGAGTGGATCACAGACAGCATAAAGGCTGGACACCTTCTCTCATACCTCCAGTATCAGCTGTATGCCAAGCAGAAGGGCCTAAGCTTCAGCAAGGCCTGCTTATTTGGGGAGCCCTCGGCGGGGCCCAGCCATTCTCACAAGGAGCTGGAGGGCCGGGTGAACGGGTTGAGGAATATTCCTGATCTGGTGCGCGACCTGCAGGTTAACGGGCTGGTGGGCGAGGAGTCCCATGAACTGGGCCACCCCGGGCCACCTTCCCCATCCCTGGACCGAAAACCCAGGGAGCCGCCTCCTACCCTCACCAACGGCCATGCACACCCCCCGAACGGTGCCTTAAAACCCCAGGAACTCTCTCCATGCCCGGGCAGGGCTCAGGCCCACTCGCAGGCCGCCCCTCGGCTGCCTGTTACGGACTCCGATGTGGACTTCAGAGACGGGTGCGGGGGGGCGATGCTAAGGCCACCCGGCCCGTTACCTTTGCGCAGTCCCGTCAGACTCAACGGCTCTTGCCATCCTGGCATTCAGGGCCCTTTGCACGCTAAAAGCCCTTCAGAACTTCCTTCCTCCAGGAAACCAGCGTCCCCAGGGGGGCTGCCCAAGCCCACCGAGCCCAACTTCATATCAGACTTCTACTCGCACTCCCGACTGCACCACATATCCACCTGGAAGTGTGAGTTCACAGACTTTGTCAACATGCTGCAGCGGAGGAACAGCGGCATCTTCCCTGGGAAGGAGAAACTGAGACGCCAGAGGCCAACCAGGACCTCCGACCCAGGAAACTCGAGTACAGGCAAGGGCAGCGGGTTTGGACACACCTGTCGTGCCCCCAGCCCAGCGGCCCCTCTCCGCCGTCAGAGCTGCATTTTGCACGTAGACATGGACTGCTTCTTCGTCTCGGTAGGAATCCGACATAGACCTGACCTGAAAGGGAAGCCAGTGGCGGTCACCAGTAACAGGGGAGCAGGCAGGGTCCCACAGCGGCCTGGCGCCAACCCTGAGCTGGAGATGCAGTATTACAGGCGGAGACAAATGAGGAGTAAAGGAGATGAGAAGCGAGTGTCGGAGCTGGGGGACTCCTCCTCGCCCGAGAGTCCCGACCCCTCCCACGTCAATGGAGTGGACACGGACCTGGCTGCTCTCTCCATGGCCGAAATTGCCTCCTGTAGCTATGAAGCCAGGCAGGCGGGGGTAAAGAACGGGATGTTTTTCGGCCAGGCCAAGCAGCTGTGCCCTCATCTCCAGTCTGTGCCCTACGACTTCCATTCCTACAAAGAGGTGGCACTGGCCATGTACGAGACGCTGGCAAGCTACACTCATGACATCGAGGCGGTCAGCTGCGACGAGGCGCTGATGGACGCGACGGAGCTGCTGAGCGAGCTGGGGGTGTCACCCGATGACCTGGCCAGTGCCATCCGAACCGAGATCCAAGAAAAAACCAAATGCACTGCCTCTGTGGGCATGGGTTCAAACATTCTGCTGGCCAGAATGGCAACTCGCAAGGCCAAGCCAGACGGGCAGTATTACCTCAAGCCAGAGGAAGTGGATGACTTCATCAGAGATCAGCTAGTCACCAGTCTGCCAGGGGTCGGCAGGTCGATGGGCTACAAGCTGGCCTCGCTGGGCGTAAGGACGTGTGGCGACCTGCAACAGGTGTCCATGGCCAAGCTGCAGAAGGAATTCGGGCCCAAAACCGGTCAGACGCTGTTCCGTTTCTCCAGGGGGCTGGACGACCGGCCCGTGAggagcgagagggagaggaagtCCGTGTCGGCAGAGATGAACTACGGCATCCGCTTCACACAGCCGTCGGAAGCCGAGTCGTTCCTGATGAACCTGGCAGTGGAGATCCAGCGGCGGCTGCAGTCGGCTGGGATGAGGGGCCGGCGACTCACCCTCAAGGTCATGGTGCGCAAGCCCGGTGCCCCCCTGGAGCCAGCCAAGTATGGGGGCCACGGCATCTGTGACACCCTCGCCAGGACAGTAAGCATGGACCAGGCCACAGACAATGCCAAGGTCATAGGCACAGAGGCAATCAAACTGTTCCACTCCATGAAGCTCAACGTGTCCGATATGCGAGGGGTGGGAATGCAGATGCAGCAGCTGTCCTCAGCATCCTCGACATCGCCGTGGAACTCATCGGGCCAGACTGCGCCGCGCTCGCGCTCCATCAGAGACATGCTCTTCACACATCGCCGGACCAGCCACCCCACCAGCCTGGGCCCCGCAGCCTCGCCAGATGTTCTACCTGGTGCCCCAGCGCAGGACGCAGGCCCCAGTAGGGACAGGACCTCCCCCGTCTCAATGCTCCTGCCTCCccctccatcctcctcctcGACGCCGGAGCCCGTGCCAGGGACGAGCAAGGGGGAGCCTGCCCTCCGATACAATGGGGGGCTCCATCCCCACGCCAGGACGCGACTGAACCTCAGCATCGAAGTGCCGTCCCAGATCGACCCCTCAGTGCTGGAGGCCCTCCCGCCAGACATCCGGGAGCAGGTGGAGCAGACTTGCCACAGCCGAGCCGAGGACACGTCCACCCGCACCGCCCCCGAGCCCCAGCACCTGGGCACCCTGGTCCTGCAGATCCCCGATCAGCTGACACAGGGTGGCATTATCCTAGCCCTGCCCGACCTCTCCCAGGTTGACCCGGACGTGTTTGCTGCGCTGCCCCCAGAACTGCAGGAAGAGCTGCGGTCGGCCTACGGACAGAGACAGACCCCCAACCAGCCTGTCACAGTGGCAGTGGCCAGGAACACCCTGCTGCATCTGAAGCCGCCGCCGGCCGCAAAGACCAAGAGGCGCAACAAGAAGAAGAACCTGGCCAGCCCTGTCAAGAAGGGCCAGAGCCCCCTGAAGAGCCGGCTCCTCACCAGCCCTGCCAAGAGCAGCCCCCACAAGCTGCTCCCAGACCTGCTGAAGCACGGGGGCCCGGCCACCGACGCCCTGAAGCTGGAGCCGAGGCCGTCCACGTCGGGCCTGAAGCCGGACCCCCAGGAGGAGGTGTTGAAGCCTGCCGTCCACCGAGGACCGAGCCTGGCTGGGGCCTTCGAACTGCAAGACATCAAGGGGCTGCTGAAGGAATGGGTCACCACCATCTCGGaTCCAATGGAGGAGGACATCCTGCAGGTAGTCAAGTACTGCACTGACCTCATCGAGGACAAAGACCTGGAGAAACTCGACCTCGTCATCAAGTACATGAAAAGGCTCATGCAGCAGTCGGTGGACTCTGTGTGGACGATGGCGTTCGACTTCATCCTGGACAACGTTCAAGTGAAGTGTCAATGGAGGTCTGGAAGCGATGGCTCTCATGGAGCGATCTCGCTGAACGTTCGAAACCCCAGGTCGGTGGCAGGCTGGAGCCGGGCTGAGAGCAGCACGCACAGGGCCAGCAGGATTCACGTTTCGGGAGAAGGACTAAGCATTCTGGGAGCCTGGCGCTCTCTGCTCGCTGTGCCATAA

Function

symbol description
rev1 Predicted to enable DNA-directed DNA polymerase activity and deoxycytidyl transferase activity. Predicted to be involved in error-free translesion synthesis and error-prone translesion synthesis. Predicted to act upstream of or within DNA biosynthetic process and DNA repair. Predicted to be located in nucleus. Orthologous to human REV1 (REV1 DNA directed polymerase).

NR:

description
PREDICTED: DNA repair protein REV1

GO: NA

KEGG:

id description
K03515 REV1; DNA repair protein REV1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014746 True 3814 mRNA 0.61 23 29588801 29614037

Neighbor

gene id symbol gene type direction distance location
AMCG00014743 NA coding upstream 30100 29540531 ~ 29558701 (+)
AMCG00014736 cryaa coding upstream 151694 29431521 ~ 29437107 (+)
AMCG00014740 LOC107557921 coding upstream 167422 29400632 ~ 29421379 (+)
AMCG00014741 LOC106586690,LOC106582147,LOC106575755 coding upstream 190580 29383488 ~ 29398221 (+)
AMCG00014737 NA coding upstream 267209 29307940 ~ 29321592 (+)
AMCG00014745 txndc9,LOC107568936,LOC107668903,LOC106586783 coding downstream 29739 29643776 ~ 29649810 (+)
AMCG00014747 NA coding downstream 39156 29653193 ~ 29657089 (+)
AMCG00014753 NA coding downstream 45507 29659544 ~ 29684659 (+)
AMCG00014752 NA coding downstream 94368 29708405 ~ 29733622 (+)
AMCG00014751 NA coding downstream 121854 29735891 ~ 29739643 (+)
G72426 NA non-coding upstream 396523 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 428376 29157025 ~ 29160425 (+)
G72409 NA non-coding upstream 451448 29137129 ~ 29137353 (+)
G72354 NA non-coding upstream 597502 28989607 ~ 28991299 (+)
G72353 NA non-coding upstream 603225 28981122 ~ 28985576 (+)
G72767 NA non-coding downstream 1222799 30836836 ~ 30837169 (+)
G72768 NA non-coding downstream 1227523 30841560 ~ 30844670 (+)
G72769 NA non-coding downstream 1232125 30846162 ~ 30846421 (+)
G72783 NA non-coding downstream 1341868 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 1389335 31003372 ~ 31003788 (+)
AMCG00014738 NA other upstream 309652 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 332447 29247875 ~ 29256354 (+)
AMCG00014729 NA other upstream 750891 28797049 ~ 28837910 (+)
G72175 LOC102776245 other upstream 1284728 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 1709001 27868703 ~ 27879800 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 229430 29843467 ~ 29846586 (+)
G72605 NA other downstream 237413 29851450 ~ 29851821 (+)
AMCG00014777 NA other downstream 1150314 30764351 ~ 30812287 (+)
G72785 fam160a2 other downstream 1364179 30978216 ~ 30978825 (+)
G72786 NA other downstream 1365533 30979570 ~ 30980252 (+)

Expression


Co-expression Network