AMCG00014749


Basic Information

Item Value
gene id AMCG00014749
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29658273 ~ 29659385 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014749
ATGCTAATCAGGACTGCCCTTAACCCGTGTGTTAACCCGCACTTACGCACACTGACGAGCCTTGCCCAGGAGGGTGgccggggtctggtcttgaaatcGCTGTCCACGGATGTGTATGAGAACCTGGCTTTGGAGGACTGGATTCACGACCACGTCGACTTGCAGAGCAGGACCCTGCTTTTGCTGTGGAAAAACACGCCGGCCGTCGTGATCGGCAGACACCAGAACCCCTGGCAGGAGTGCAACCTGAGGCTGATGCGGGACAGGGGCGTAGCGTTGGCCAGGAGGCGCAGCGGCGGCGGGACGGTGTACCACGACCTGGGCAACATCAACATGACCTTCTTCACGTCCAGGAAGAAATACGACCGGGTGAGGAATCTGAGGGTGGTGACCAGCGCGCTGCAGCAGCTCCGACCCGGCCTCGACGTGCGGGCGACGGAAAGATTTGACATCCTGCTGAACGGGGGGTACAAAATCTCGGGCACCGCCGCCAAACTGGGCCGGGTCTCCGCCTACCACCACTGTACCCTGCTGTGCGGCTCCGACCGGTCCCTGCTCTCGGCCGTGCTGAGAAGCTCCTGTCAGGGAATCCAGAGCAACGCCACCCCGAGCGTGCCTTCCCCGGTGAAGAACCTGCAGGATGAAGACCCCAGCTTAGACTGCCGGGCCGTCATGGACGCGGTGGCGGCGGAGTACAGCGCGCAGTACGGCTTGGACCACCGTGTCTCGGACATCGACCCGACTGATGAGATCTCTCTGCCGGGTATACGTCGGATGGCTCAGGACTTAAAGACCTGGGAGTGGGTGTACGGGAAGACGCCGAAATTCAGCGTCAGGAGCGGTTTTGAGGTGCGCGACGGGAGCTCCAGCAGCAGCGCCGCGCTGAGGATGGGCGTGAGGAACGGCCTGATCGAGTCGTGCCGCGTCGAGCTGCCCGCGGACTGGCTGCCGGCTGCCCTGTGCGACGAGCTGGCCGCGCAGCTGATCGGCGGCAGGTTCTGTCCCGGCGAGACCGCGGTGCTGACGGCCGCCGTGCTCAGGACGTGTCCGCAGGGCAGCGAGATCCGAAACAAGTGGAATATCCTGTGCGACAGCGTGGCTGCGGTCATGTGa

Function

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K10105 LIPT1; lipoyltransferase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014749 True 1113 mRNA 0.64 1 29658273 29659385

Neighbor

gene id symbol gene type direction distance location
AMCG00014750 NA coding downstream 6964 29650438 ~ 29651309 (-)
AMCG00014748 eif5b,LOC107567794 coding downstream 14570 29615521 ~ 29643703 (-)
AMCG00014744 NA coding downstream 151212 29490065 ~ 29507061 (-)
AMCG00014742 sik1,LOC105911651 coding downstream 194397 29454042 ~ 29463876 (-)
AMCG00014735 NA coding downstream 274825 29351748 ~ 29383448 (-)
AMCG00014756 unc50,LOC107672653 coding upstream 175866 29835251 ~ 29841157 (-)
AMCG00014755 NA coding upstream 184039 29843424 ~ 29852958 (-)
AMCG00014759 NA coding upstream 255870 29915255 ~ 29940883 (-)
AMCG00014758 NA coding upstream 290646 29950031 ~ 29951305 (-)
AMCG00014762 rabl3,LOC107659889,LOC107595844 coding upstream 552753 30212138 ~ 30217061 (-)
G72530 txndc9,LOC107568936,LOC107668903,LOC106586783 non-coding downstream 8631 29647588 ~ 29649642 (-)
G72535 NA non-coding downstream 96207 29560538 ~ 29562066 (-)
G72495 NA non-coding downstream 234901 29421260 ~ 29423372 (-)
G72472 NA non-coding downstream 306619 29350078 ~ 29351654 (-)
G72438 NA non-coding downstream 440240 29217780 ~ 29218033 (-)
G72581 NA non-coding upstream 79822 29739207 ~ 29743212 (-)
G72629 NA non-coding upstream 287332 29946717 ~ 29947061 (-)
G72642 NA non-coding upstream 309270 29968655 ~ 29982575 (-)
G72646 NA non-coding upstream 394955 30054340 ~ 30055173 (-)
G72659 NA non-coding upstream 507332 30166717 ~ 30166926 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 259968 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 1325791 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 2288746 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 2353676 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 7413358 22225924 ~ 22244915 (-)
AMCG00014775 NA other upstream 1182138 30841523 ~ 30846800 (-)
G73047 NA other upstream 2603782 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 2795921 32455306 ~ 32555945 (-)
G73127 NA other upstream 2938077 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 3135620 32795005 ~ 32806295 (-)

Expression


Co-expression Network