AMCG00014750


Basic Information

Item Value
gene id AMCG00014750
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29650438 ~ 29651309 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014750
ATGCTTGTTGCTTTGCCTCCTGAGGTGTATGAAGAACGGGCTAAAGAGCACGACAAGTATGGTGGGGACCCTGAGCAGCCACACAAATTGCACCTCATCACCAGGATAAAGAGCACCATGCGACGGCCCTACTGGGAAAAGAAAGTTGTGCAGGATCTGGGACTAGGCAAGgCACATCAGCCCCGTGTGCACAAAAACATTCCTTCTGTCAACAACAAGCTAAAAATCATAAAGCACCTTGTGAGGATCCAGCCCCTGAAGCTGCCCCACGGACTGCCAGCAGAGGAGGAGCTGGCAGACACCTTTGTGAAGAGCACCGGGGAGTTGGTTGTAAGACGTCGCCTGCAGCCCCTGGAACAAAAAGCCATCGAATCGTAG

Function

GO:

id name namespace
GO:0006412 translation biological_process
GO:0015934 large ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02907 RP-L30, MRPL30, rpmD; large subunit ribosomal protein L30

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014750 True 378 mRNA 0.53 3 29650438 29651309

Neighbor

gene id symbol gene type direction distance location
AMCG00014748 eif5b,LOC107567794 coding downstream 6735 29615521 ~ 29643703 (-)
AMCG00014744 NA coding downstream 143377 29490065 ~ 29507061 (-)
AMCG00014742 sik1,LOC105911651 coding downstream 186562 29454042 ~ 29463876 (-)
AMCG00014735 NA coding downstream 266990 29351748 ~ 29383448 (-)
AMCG00014732 NA coding downstream 618530 29023778 ~ 29031908 (-)
AMCG00014749 NA coding upstream 6964 29658273 ~ 29659385 (-)
AMCG00014756 unc50,LOC107672653 coding upstream 183942 29835251 ~ 29841157 (-)
AMCG00014755 NA coding upstream 192115 29843424 ~ 29852958 (-)
AMCG00014759 NA coding upstream 263946 29915255 ~ 29940883 (-)
AMCG00014758 NA coding upstream 298722 29950031 ~ 29951305 (-)
G72530 txndc9,LOC107568936,LOC107668903,LOC106586783 non-coding downstream 796 29647588 ~ 29649642 (-)
G72535 NA non-coding downstream 88372 29560538 ~ 29562066 (-)
G72495 NA non-coding downstream 227066 29421260 ~ 29423372 (-)
G72472 NA non-coding downstream 298784 29350078 ~ 29351654 (-)
G72438 NA non-coding downstream 432405 29217780 ~ 29218033 (-)
G72581 NA non-coding upstream 87898 29739207 ~ 29743212 (-)
G72629 NA non-coding upstream 295408 29946717 ~ 29947061 (-)
G72642 NA non-coding upstream 317346 29968655 ~ 29982575 (-)
G72646 NA non-coding upstream 403031 30054340 ~ 30055173 (-)
G72659 NA non-coding upstream 515408 30166717 ~ 30166926 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 252133 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 1317956 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 2280911 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 2345841 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 7405523 22225924 ~ 22244915 (-)
AMCG00014775 NA other upstream 1190214 30841523 ~ 30846800 (-)
G73047 NA other upstream 2611858 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 2803997 32455306 ~ 32555945 (-)
G73127 NA other upstream 2946153 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 3143696 32795005 ~ 32806295 (-)

Expression


Co-expression Network