AMCG00014752


Basic Information

Item Value
gene id AMCG00014752
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29708405 ~ 29733622 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014752
TAATCACCGCGTTGTGGCCGCGGAGCTGATGGAGCCAAAAATGGAGGAAGCCGAGGGAGGCAGTGAAGATATCACTGgGAAGAAGAAGTCAAGGTTCAAGTCGTTTAAGATCCGGCTGTttgggaagaggaagaggaaggagggTGGGACCTCAGCCTCCAAGAGCAGCTTGAAGCAGAGCCAGTCCTCCAGTGATGTCACTGCCCCTGAATCCTTGAGAGCAAATTATGACTCGGAAGAGGAATTTGGGTATCCTCAAGGTGTCCTGGCCTCTCGGGCACTGTCCCATGACAGCATCTTCATTGCAGAGAGCTCCCAGACTTCCCCAGGACCAGCCCGGGTCCTGTCGCAGGAGAACTTGAAGCTGCAGCAGAACATCCGCCTGGGCCCCCCGCCGCTGGTGATCCCCAGCAAGAGGAGCGAGGATGCAGGGGCCAGCTCTGAAGATGATGGACTGCCCCGGAGCCCCCCCGAGATCTCGCCCCTGCACGACAGCCTGGTGCGGGTCTCGACCTCCCGGGTAAACCCCGTCTCCCACCCCAGCCTGGTTTCCACTGCCCTGGGACACACTGCAGCCTGTTCACGCACTCTGCTTAGCAGGGGGGCGATGAGGCACCATAGCTCTTTGAGTTTAGCTGGGACAGGCAGCGAAGAGGAGGAGCAGGACTCCTCCCAGCCACCGTCCCGCCCCCTCTCCCCAGTGTACAGACCTTCGCCCAAGTCCGCCAGTCCCCTGTCCCCCAGTGCTGACTTCAGCTCCCCGCCTCAGCTCACCACATGCCTGGACAACTCGGCTGCCCGTCACCGGCTGTCTGTCAAACCCAGAAAACAGAGAGCCAGTGCCAGAGGGAGGAGGCCCACCCCGAGCACACGTCGACCACGCTCTGAAAGCTTGAACGATTTGGACTTCACACTCCTGGAgaatgaagaggaggaggagcaggaggtcCCCCAGGAGATAATAAGATGCTACTCCTACTCCAGTCAGGTGTCAGTCTCTGGGCCAGAGAGTGCTCAGGTCACCAAGAGCTCAGAAAACACGCCAACTCAGAATTTTCAGACTTCAGATAATACTGCTGCAAAAGAACCTGTGGCGAAATCTGAAGTTTCAGAAGCTAACTCCTCCAACAGCAGTCTAGCCAAGAGCTCGCTCAATCTCAGCCATGGAGCACAAAGTGAGCCCTGTTCCAAAGAACAGCCTTCCAGTGCTCCTAGGCTGGTAAAAACCCTGCCTTCTGTTGACAGGGTGAGAACGGCTAGAGATTCTTCTCTGACAAAAAGTTCGGTAGCCATTCAGGGAGTTGCACAGGACAGCATATCTCCAGATCTTGCCCAAGTAACAGCATCAACGCCGGCAGAGGAGGAAGCAGTGCCTGCAGCCAAGGTCAACCTCAGGCATAATCCGTCATTCAAGAAAACCAATGGTGGATCGTTCCGCTTCTCCATTTCCTCTGCTTGGGACAGGCCGAGAGCCAGCAGCTTTGTGGCAGCCGAGCCTACCGAAGTAAAGACTGAAGAGGGGGTCCTGCCCAAGACCTCTTCATACCCTAAACTCAGCCCTGTGGCTAGAACAGAAGAAACCAAGCCAGAGCTTCAGCGCACACTGGTGGCCAATCAGCAAGAAAGAAGAAACACCCTGAGGAAACAGGACGAGACCCCCTCCAAAGCAGCCAAGGAGCTTTGTGAGAAGCTGGCGCCGGCCACCAGGCTCGGAGACCCCACTGGGTGTGAGCCGGTGGGCTTGGAGGATGACGTGGGTGAGAGGTCGCCATTCGGGGTGAAGTTGCGCTCTACTTCCCTGTCTCTGAGATACCGCATGGGCTCCCACCCTGACCTCAAGGTCAAGCGCCACAGTGCAGAGGTCTGCCCCGCTGCTCCCAACTCCCAAGACCTCATCCTGCTGCCGAGGGCTGGCAAATCAGACCAGGACAAGAACTGTGAATCTCCCGGGGGCTCCCTAAAAGATGAATGCAATGTCAAGGCCAAATCCACAGAGCAGCTTAATATCAAGCCCCCATTACCCAGGAAGCCCGCGGTGCAGAACACAAGCCCCCCCACTTCCTCCACTACAGCCAAGTCTCAGCCCAAGAACCCTGAAAGGCTGAGCTTCCACAAACTTGGCGATTTTGACCTGCAGATAGATCAGCCTGTTAATCCAGAGATAGGAATTCTTACCAAGAGTGTGGCTGATGCTGGGAAGGAGAGCGACTCTTCTGGCGGGCCAGCATGGATTACAATGgccaggcagagacagagaggcttCCAGCAGCACTACAACAACAAAGAAGACACAGATCCAGTGCCAGAgggccagacagacagactgaaccATGGAGAGCACAAGccaGAGCCGGGGAGAGCTGTGTGtgaggtgcgtgtcagtgtcgAGTCCCCCACCCTACGGAGAGCTGCACCAGACAGCAGGCTGGAAGTGAAATTGGAGAGGTGGCAGGCTGCTAGAACAACCCCTGCAGAAGCTGCGCCCTGCCCAGCAGAGAAAGAAGACAAACTGCAGTCTGGCAAAGATTCTCCACTGTCTGTATCGCCGTCTGCTGCTGTGCTGGGGAAGCCGTCCTGGATGGAGCTAGCGAAGAAGAAATCACAGGCGTGGAGCGACAAGACCATGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014752 True 2629 mRNA 0.57 12 29708405 29733622

Neighbor

gene id symbol gene type direction distance location
AMCG00014753 NA coding upstream 23746 29659544 ~ 29684659 (+)
AMCG00014747 NA coding upstream 51316 29653193 ~ 29657089 (+)
AMCG00014745 txndc9,LOC107568936,LOC107668903,LOC106586783 coding upstream 58595 29643776 ~ 29649810 (+)
AMCG00014746 rev1 coding upstream 94368 29588801 ~ 29614037 (+)
AMCG00014743 NA coding upstream 149704 29540531 ~ 29558701 (+)
AMCG00014751 NA coding downstream 2269 29735891 ~ 29739643 (+)
AMCG00014754 mgat4a coding downstream 54104 29787726 ~ 29829991 (+)
AMCG00014761 olig3 coding downstream 359790 30093412 ~ 30094212 (+)
AMCG00014760 NA coding downstream 366364 30099986 ~ 30142954 (+)
AMCG00014778 NA coding downstream 428356 30161978 ~ 30172006 (+)
G72426 NA non-coding upstream 516127 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 547980 29157025 ~ 29160425 (+)
G72409 NA non-coding upstream 571052 29137129 ~ 29137353 (+)
G72354 NA non-coding upstream 717106 28989607 ~ 28991299 (+)
G72353 NA non-coding upstream 722829 28981122 ~ 28985576 (+)
G72767 NA non-coding downstream 1103214 30836836 ~ 30837169 (+)
G72768 NA non-coding downstream 1107938 30841560 ~ 30844670 (+)
G72769 NA non-coding downstream 1112540 30846162 ~ 30846421 (+)
G72783 NA non-coding downstream 1222283 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 1269750 31003372 ~ 31003788 (+)
AMCG00014738 NA other upstream 429256 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 452051 29247875 ~ 29256354 (+)
AMCG00014729 NA other upstream 870495 28797049 ~ 28837910 (+)
G72175 LOC102776245 other upstream 1404332 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 1828605 27868703 ~ 27879800 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 109845 29843467 ~ 29846586 (+)
G72605 NA other downstream 117828 29851450 ~ 29851821 (+)
AMCG00014777 NA other downstream 1030729 30764351 ~ 30812287 (+)
G72785 fam160a2 other downstream 1244594 30978216 ~ 30978825 (+)
G72786 NA other downstream 1245948 30979570 ~ 30980252 (+)

Expression


Co-expression Network