AMCG00014765


Basic Information

Item Value
gene id AMCG00014765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30668526 ~ 30689037 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014765
ATGGTGAAAGACCAGATCAGACAGCTGGAAGAGCCAGCCATTAAGAAGCTAAAAGATACCTTTATTGAAACCATAAAAATCGACAAAGAGGCCACAGCGGAGTCTATGCTAAGGACCCAGTTTAAGATGGAGATGGTAGTGTACACACAAGATAGCATCTACAGCACCCATCTGTATGAAGTCAAAGAAGATGAGGAAGAAAACACACCAGGAAAGTTGATTGCCTCTAAGCGCCTAGCAGACCAGATCCCCCTTGTCATTCAATACTTAACTCTTCAGGAATCAGCAGATCAGCTTCACAGAGAGATGTTCCAGCTGCTTCAGGACAAGAACAGCTTGGATAACATCCTAAAAGAAGATTCAGAGATTGGAGCTGCAGGTACAGTTCCTGCTGTGCTAAATGACATGCAGGAGAACACTACTCTGAATGCACAATATGAGGAGAAGGTGCGGCCCTGCATTGATCTCATCGACTCTCTGCGGTCCCTGGGGGTGGAGAAGGATCTGGCTCTGCCTGCCATTGCTGTGATTGGAGACCAGAGCTCTGGGAAGAGTTCAGTGCTGGAGGCGCTGTCTGGAGTGTCCCTGCCCAGGGGGGCTGgGATTGTGACCCGCTGTCCCTTGGTACTGAAACTCAAGAAAGTGAAAGTGGGAAAGCCATGGGAGGGAAGACTTCTTTATAAAGATAATGAAGTAAAACTGGGAAGCACAGCAGAAGTGGAGGAGGAAATCCGTAGAGCCCAAGACATTATAGCTGGCAAAGGTGAAGGAATCAGTGAAGAAATGATCAACCTAGAGATCAAGTCCAGTGAAGTCCCTGATCTGACCCTCATTGACCTCCCAGGGATTGCTCGAGTAGCCGTTGGCAACCAGCCCAAAGACATTGGGGAGCAGATTAAACGAATGATCCGCAAGCAAATAGATAAACAAGAGACCATTAGTTTAGTGGTGGTGCCATGCAATGTTGACATTGCCACCACAGAGGCTTTGAAGATGGCCAAGGAGGTTGACCCTTCAGGAGAGAGGACACTGGggATCCTGACAAAGCCAGACCTGGTGGACGAGGGCACTGAAGTGAAGATTGTGGCTGTCATGCGCAATTTAGTCATCCCTCTGAAGAAGGGTTATATGATTGTGAAGTGCCGTGGCCAGAAGGACATCAATGCAAATCAGACACTGGCTGAAGCTATCAAGAAGGAAAAGGCTTTCTTTGAGGATCACCTTCATTTCAGGCAAGGATATAGTGAATGTAAATCTCTCCCTCATCTGGAAAATCAGATTGAAGAGAAACTTCAGACGACGGTCAGGGAACTTAAGAAGTATGGAGAGGCAATACCAAGGTCTGATAAAGAGAAGTTGACCTTCCTGATTGAAACAGAAGGCCTCAAACACCTGCACCGAACCACTTGCTCCTTACTGTTGGAGTTTCTGAACCTGTCTATTCCTGACAAGCTGGAGGTTATCCAAGGAGGTCAGTCTGACATTAAGACAGCTGTGCAGGATTTGCTGAATTTCATGGAGAAACGGAGCCAGCAGCAGCCAGAGGAGGCAAAGCTCTTGCCGTTGCCCCGCTTCCAGCctgaaggagaagaggaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K14754 MX; interferon-induced GTP-binding protein Mx

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014765 True 1596 mRNA 0.48 11 30668526 30689037

Neighbor

gene id symbol gene type direction distance location
AMCG00014764 NA coding downstream 22187 30630436 ~ 30646339 (-)
AMCG00014763 NA coding downstream 41179 30620505 ~ 30627347 (-)
AMCG00014762 rabl3,LOC107659889,LOC107595844 coding downstream 451465 30212138 ~ 30217061 (-)
AMCG00014758 NA coding downstream 717221 29950031 ~ 29951305 (-)
AMCG00014759 NA coding downstream 727643 29915255 ~ 29940883 (-)
AMCG00014766 NA coding upstream 5 30689042 ~ 30695325 (-)
AMCG00014780 NA coding upstream 70120 30759157 ~ 30763061 (-)
AMCG00014782 NA coding upstream 233318 30922355 ~ 30925207 (-)
AMCG00014785 NA coding upstream 263434 30952471 ~ 30979877 (-)
AMCG00014791 LOC106574540 coding upstream 572679 31261716 ~ 31279130 (-)
G72693 NA non-coding downstream 273188 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 406922 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 457130 30211142 ~ 30211396 (-)
G72659 NA non-coding downstream 501600 30166717 ~ 30166926 (-)
G72646 NA non-coding downstream 613353 30054340 ~ 30055173 (-)
G72790 NA non-coding upstream 257053 30946090 ~ 30947343 (-)
G72791 NA non-coding upstream 261073 30950110 ~ 30951375 (-)
G72862 NA non-coding upstream 773142 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 777455 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 791811 31480848 ~ 31485466 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 1270221 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 2336044 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3298999 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 3363929 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 8423611 22225924 ~ 22244915 (-)
AMCG00014775 NA other upstream 152486 30841523 ~ 30846800 (-)
G73047 NA other upstream 1574130 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 1766269 32455306 ~ 32555945 (-)
G73127 NA other upstream 1908425 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 2105968 32795005 ~ 32806295 (-)

Expression


Co-expression Network