AMCG00014767


Basic Information

Item Value
gene id AMCG00014767
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30241706 ~ 30250266 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014767
CTCTTCTTCTTCATAGGGACTTTTCGCTGCACCTTTTGCCAGACggaggtggaggaggatgaGTCTGCATTGCCTAAGAAAGACGCCAGGACGCTGGTGGCCAGGTTCAATGACCAGATCGAGCCCATCTATGTCCTCCTCAGGGAAACGGAGGACATCAACCTGTCCGCCGAATTACTGGAGCCAGAGCCTACAGAGATCCCGGCCCTCAGGCAGAGCAGGGAGAGGGCGGCGGCCGCAGCGGCAGCAGCTTCAGGGGCTCACCGGGAAAACTGGGCAACCAAGGGCTCGGCCTACGAGGACCTCTACACCCAGAAAGTGGTCATCAGCATGGAGGAGCAGGAGGAACAGAAGCGCTTGGCCGGGGATGGGAAGGCGCCCAAGGAGAGACCTGTCTGGCTGACGGAGAGCACTGTCCAGGGAGCCTACAACGATGCCGAGGACCTGAAGCATGGCGCAGAGGACATGGCAGGCCTGCGGGAGGCTGAGGACGGCCGGCAGATGCAGCTAGACGAGAACGAGGAAGTCATGCGTACGCTGCTGATCCACGAGAAGAGGGGTGCCGGCTCGGCCTCTGGGCCCGGGGGGGCAGCTGCGGCGGCGGGGGCGACCCTAGTGGGCGCCAACGCCAGCGACTCCGAGAGCGACACCAGCGAGTCGGACGACGACTCCCCGCAGCGCCCCCCGGCCCAGAGCCTCTCcaggatggaggaggaggacgacgaCGAGTTCGAAGAAGTCGGGGATGAGCCCATGGTGCTGGTGGCCGGTCGGCCCTTCTCCTACCGGGAAGTGAGCCAGCGACCCGAGCTGGTGGAGCAGATGAGcacagaggagaaggaggccTACATTGAAATGGGGCAAAACCTTTTCCAGGATATGTTTGATGTGTGAACAAAgactcactttttttttttttttttttcctgttcattttcCTCTTGTGACCTAACTTTCTCTTTCCAGTGGGGGACTGAGGACGCAGGAATGGCCAAATATTATACAGCCCGTTAAGAAAAGGAGAATGGTGTTGAGTTCGGGCCACCAAGTGTAAAGTTTGGCATATGCCTGAatccatgttttttgtttattttttgtaatccaATAGAAGAACACATTGAAATGGTGCAAGCATTTAGTAGGTTAAAATGTCTATTAGCACAACAGAAGAACAGTATTTTGGGGGCATGCTGAGTTTCTCAAGTTGTCTGAGGATGAAAAATGGCAGCACTAGTGACGCACCGCACAGAAAGTACACTAGTTGGAAGTGCCAAGTaaatttgtagtttttatttcccatttcaGATTTAACCATGTGAATCCTTGGAGACATGCATGTCATCCCCTGTATTCTAAGCTTTAGTTCACAACAGCCAGTTTTTTCCACACAACTATTgccaagaataaaaatatacgtacattttattgtgattgttttttgagtgttttttgtttgtttgtctattgTGTTTTTAGTAAACAAATTCTTAGTGTTTCTCTGCTGTGCAACCTGGGGCTTAATATAAGCTTTTACTTTTAGGCCCTGGTaagtttaaaattgttttattcagttttctttttatctggCATTTGAATTCCCAAgatgtttggtttatttattttcatgtttatatatcactgctgtaaaatatttttgggCAGTATGTCTTACCTTATGTAATTTCATTTATAATTCTGAAAAAATTCACTCCAttatcctttttcttttaaatatatgattttttttttattttttttttaacaaaccttAGACAGAATGTTTGGCTCCAGAGTAAAACAGTTGcacttgaaatcaaatatattttttattttcttgtgcaTCAGACAATATCTAAGGCTAAGGTTCCACTTTACTGAGGTTCAAATAATACTTTACTCTGTTCAGCTCAGTAAAGTTATTATTCGCTACACATCACCACTatactgaataaaaatacattctgtatttttctctctctctctctctctctctctctctaagacAGAAGTTTTAGAAATCTTCTAATCGTTGTaaattttgcatattttttagttttattaaccATATGAGGCTATGCCTATGATGAGGGTGTACAAtacttcttttgttttttgtacttaaGTTGGTTGGGTTCCATGAATATCTCTCACCCTCCCTCCTTATTTGAGCGTTTGATTCccattttgtttaatgacaAACGTGAGCCTGTGACATatatgtttttgcttgtttatgaCTTTATAAACAGACCTGTTTCAGACCACAATAAAAGCCAAT

Function

GO: NA

KEGG:

id description
K03136 TFIIE1, GTF2E1, TFA1, tfe; transcription initiation factor TFIIE subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014767 True 2278 mRNA 0.45 3 30241706 30250266

Neighbor

gene id symbol gene type direction distance location
AMCG00014776 NA coding upstream 29875 30197763 ~ 30211831 (+)
AMCG00014773 NA coding upstream 59309 30175067 ~ 30182397 (+)
AMCG00014778 NA coding upstream 69700 30161978 ~ 30172006 (+)
AMCG00014760 NA coding upstream 98752 30099986 ~ 30142954 (+)
AMCG00014761 olig3 coding upstream 147494 30093412 ~ 30094212 (+)
AMCG00014769 stxbp5l coding downstream 275727 30525993 ~ 30531499 (+)
AMCG00014770 NA coding downstream 294947 30545213 ~ 30548522 (+)
AMCG00014772 NA coding downstream 343863 30594129 ~ 30610104 (+)
AMCG00014779 NA coding downstream 409335 30659601 ~ 30660595 (+)
AMCG00014774 NA coding downstream 449940 30700206 ~ 30710420 (+)
G72426 NA non-coding upstream 1049428 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 1081281 29157025 ~ 29160425 (+)
G72409 NA non-coding upstream 1104353 29137129 ~ 29137353 (+)
G72354 NA non-coding upstream 1250407 28989607 ~ 28991299 (+)
G72353 NA non-coding upstream 1256130 28981122 ~ 28985576 (+)
G72767 NA non-coding downstream 586570 30836836 ~ 30837169 (+)
G72768 NA non-coding downstream 591294 30841560 ~ 30844670 (+)
G72769 NA non-coding downstream 595896 30846162 ~ 30846421 (+)
G72783 NA non-coding downstream 705639 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 753106 31003372 ~ 31003788 (+)
G72605 NA other upstream 389885 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 395120 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 962557 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 985352 29247875 ~ 29256354 (+)
AMCG00014729 NA other upstream 1403796 28797049 ~ 28837910 (+)
AMCG00014777 NA other downstream 514085 30764351 ~ 30812287 (+)
G72785 fam160a2 other downstream 727950 30978216 ~ 30978825 (+)
G72786 NA other downstream 729304 30979570 ~ 30980252 (+)
G72787 NA other downstream 739797 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 893157 31143423 ~ 31147877 (+)

Expression


Co-expression Network