Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014778 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 30161978 ~ 30172006 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0003677 | DNA binding | molecular_function |
| id | description |
|---|---|
| K10849 | ERCC1; DNA excision repair protein ERCC-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014778 | True | 271 | mRNA | 0.50 | 4 | 30161978 | 30172006 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014760 | NA | coding | upstream | 19024 | 30099986 ~ 30142954 (+) |
| AMCG00014761 | olig3 | coding | upstream | 67766 | 30093412 ~ 30094212 (+) |
| AMCG00014754 | mgat4a | coding | upstream | 331987 | 29787726 ~ 29829991 (+) |
| AMCG00014751 | NA | coding | upstream | 422335 | 29735891 ~ 29739643 (+) |
| AMCG00014752 | NA | coding | upstream | 428356 | 29708405 ~ 29733622 (+) |
| AMCG00014773 | NA | coding | downstream | 3061 | 30175067 ~ 30182397 (+) |
| AMCG00014776 | NA | coding | downstream | 25757 | 30197763 ~ 30211831 (+) |
| AMCG00014767 | NA | coding | downstream | 69700 | 30241706 ~ 30250266 (+) |
| AMCG00014769 | stxbp5l | coding | downstream | 353987 | 30525993 ~ 30531499 (+) |
| AMCG00014770 | NA | coding | downstream | 373207 | 30545213 ~ 30548522 (+) |
| G72426 | NA | non-coding | upstream | 969700 | 29191971 ~ 29192278 (+) |
| G72415 | NA | non-coding | upstream | 1001553 | 29157025 ~ 29160425 (+) |
| G72409 | NA | non-coding | upstream | 1024625 | 29137129 ~ 29137353 (+) |
| G72354 | NA | non-coding | upstream | 1170679 | 28989607 ~ 28991299 (+) |
| G72353 | NA | non-coding | upstream | 1176402 | 28981122 ~ 28985576 (+) |
| G72767 | NA | non-coding | downstream | 664830 | 30836836 ~ 30837169 (+) |
| G72768 | NA | non-coding | downstream | 669554 | 30841560 ~ 30844670 (+) |
| G72769 | NA | non-coding | downstream | 674156 | 30846162 ~ 30846421 (+) |
| G72783 | NA | non-coding | downstream | 783899 | 30955905 ~ 30956284 (+) |
| G72789 | NA | non-coding | downstream | 831366 | 31003372 ~ 31003788 (+) |
| G72605 | NA | other | upstream | 310157 | 29851450 ~ 29851821 (+) |
| AMCG00014757 | LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 | other | upstream | 315392 | 29843467 ~ 29846586 (+) |
| AMCG00014738 | NA | other | upstream | 882829 | 29268329 ~ 29279149 (+) |
| AMCG00014739 | NA | other | upstream | 905624 | 29247875 ~ 29256354 (+) |
| AMCG00014729 | NA | other | upstream | 1324068 | 28797049 ~ 28837910 (+) |
| AMCG00014777 | NA | other | downstream | 592345 | 30764351 ~ 30812287 (+) |
| G72785 | fam160a2 | other | downstream | 806210 | 30978216 ~ 30978825 (+) |
| G72786 | NA | other | downstream | 807564 | 30979570 ~ 30980252 (+) |
| G72787 | NA | other | downstream | 818057 | 30990063 ~ 30996363 (+) |
| AMCG00014786 | nhlh2,LOC106574539,LOC107739819,LOC105019883 | other | downstream | 971417 | 31143423 ~ 31147877 (+) |
