AMCG00014781


Basic Information

Item Value
gene id AMCG00014781
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30907169 ~ 30917566 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014781
CATTTTGTCAGCCTCCTGAGACAAACCAAGTCTGTCTTTCCTCTCAGGGCTGTGCTGCTACCCCTGCTGGACTTGCCTGCACCTTCCCAGACCCTGTTTCTGCTAGTGGACTCTTTGGACTCAGGGTTCCTTGAAGGTGCTTTGGAAAGCCAAGCTCAGGGGAACAGCAGCTCCATCTCGGCACTCCTCTCCAGTCACCAGCAACTCCTCCCAGGCTGGCTGCTGCTCGTCTGCTCCACACGCCGCCAGAACAAGGCAGTGTGCAAGATGTTCTCAGGCTTCCGGAAACTATGTCTGGATGACCTCCGCAAAGCTCACACAGTGCGTGACGTGCAGCAGTATATCCTGTGGCGGCTGGACATGGAAGGGGCGCTGCGCAGACACCTGACACGGGAGACAGCCGACATGCTCAATCAACTGCACATCAAGAGCAACGGCTGCTTCCTATTCTTGGAGCGCGTCCTGGATGGAGTGGCTGAGAACTTTGTAGCCATCCGAGAGATCCGCGATATCCCTGGCACCTTGAATGGCCTTTACCTGTGGCTGTGTCAGAGGCTGTTCCCCAGAAAGCTCTTCTCCAGGGTGCAGTCTTTGCTAAATGCCCTGCTGGCTTCTCCGTGCCCCTTGGCACTAGAGGAGCTTTATACTGCAGTGTGGACACGAGATACGACTCTTACCCCTTTGGACTTCCAGCGCAAACTGGACACCCTGTCTATGCTCTTGGTGGATGGGCCGGGTGGCACAAAGCTCCTGTTTCATGCCAGCTTTGCCGAGTGGCTGACGGATGTGAAGTACTGCACACAGAAATACCTGTGTAACCTGGCAGAGGGCCACACCATGCTCGCCATGTCTCTGACCCTTCGGAGTTCAGAGCTCTCCCCAGAGGAAGTCTGTCAGCTTGCCTTTCACCTGGTCAGCTCTAACTTGCATTCAGACAACCCTACCCTTTTGGCTCTGTGGATGGTGTGGAATGGTGTGCCTTCTTTCACAAGTAATTTCCTAGCTACTGACCCATTCCCCCCATCAGCAGTTCAACAGGAGGTGCTGCAGCTACTGATGAAGACTGGGGTTTACCCGCCATCTTCCTCCGATTGCGTCCATGGCTTGGGCATGGGCTGCATCGCAAGCGGAGGAGTTATTCGTAAGGCACTAGAGAGGGAAGACTCCGTTCGGGTCCTTTTGGAAAATGGGGCAAGTGTGAACCAAACGGATCCCACTGATGGGCGTACTTTGCTAGCCAGTGCAGCCCACGCAGGTTCCGCTGATGTTGCTGTTCTCCTCTTATCTAGAGGAGCTGATCCTGAGCTTGCTGACAACCAGGGACAAACACCATTAACTCTGGCCGCTCGACAAGGACATGCCAAGGTATTGCAGTGCTTGCTGGAGTGGGCCCGGCAAAAGGAAGACACCTTGCAGATTATCGATCATTCAGACAATGAAGGCTGGACCGCCCTACGCTCGGCAGGATGGGGAGGCCATTCTGAAGTAGTCCAGCTTCTTTTGGATGCAGGTGCAGATGTGGACGGCTGCGACTCTGAGGGTCGTACAGCACTGCGGGCTGCTGCCTGGGGTGGCCATGAGGAGATACTCTGCACTCTACTGCACCACGGGGCACAGGTGGACCTCCCAGACCGAGATGGACGCACACCACTAATTGCCGCAGCTTACATGGGCCACCGGGAGGCAGTGGAGATGCTGCTGGATCATGGTGCCGAGGTGGACCTACAGGATTCTGATGGCCGCACAGCCTTGTCAGTTGCTGCTCTGTGTGTCCCCTCGGCGGCGGGGCGAGGCTATGGAGATGTAGTTAGCCTGCTTTTGGAGCGAGGAGCCGATCCAGGTCACAAGGACCATGATGGGATGACTCCCCTTCTGCTGGCTGCGTATGAAGGACATGAGGAAGTGGTGGAGTTGCTCTTGGAGGCTGGTGCAGATGTGGAAGAAGGTGCAGGGCCTCATGTTGGTCCTGCTGCAGTGACACCACTGCTAGCAGCTGCCTCTATGGGTCACATCTTGGTAGTGAACATGGTGCTTTTCTGGGGGGCTGCTGTGGATGCCATTGATGGTGAAGGACGCACAGCCCTGAGCTTGGCAGCGGCCCGGGGAAGTGTGGAAGTTGTGCGGACGCTGCTGGACCGTGGGCTTGATGAGAACCACAGAGATGACCTGGGCTGGACGCCTTTGCATGCAGCTGCCTGTGAAGGGCACCGGGGAGTATGCATGGCCTTAACAGAGCGTGGCAGTATGGCCCGGGTGACAGAGCTGGACAATGATGGGCGGACACCACTTATTCTAGCTGCCCAGGAGGGGCATTTGGACACTGTGAGGCTGCTCCTTGACCGGCGGTCCCCCTTAGACCATAGGGCTTATGATGGTCATTCTGCACTGAGTGCGGCAGCTCTTGAAGGCCACAGGGATGTAGTGGAGCTGCTGCTGAGACGAGGAGCAGATAAGGATGTTAGGGATGCAGAAGGCAGGGCTTTGCTTTACCTCTTGGTGCTCGAGGGCCGTCTAGACATGGCTTCGCTGCTCCTTGAAAAAGGGGGAGTTCCACTGGAATCGTGTGATGCTGAGGGTAGGACAGCACTACACGTGGCTTCTTGGCAAGGACAGCTGGAAGCTATCAGCCTGCTTCTACGGCATGGTGCTGACAGCAATGCCCAGGACAAAGAGGGCCGCCCACCTTTACACTCTGCTGCGTGGCGGGGCCATGCCAGTGCAGCAGGCCTCCTCATTGATTCTGGAGCTGCCAATGTCGACCAAGCCTGTTGTCAACAAGGAGCCACAGCCCTTTGCATCGCTGCACAGGAGGGCCACACGGACTTGGTGGAAGTATTGTTGGAAAAAGGTGCCAACCCCAACCATGCTGATCGTTATGGGCGTACTCCTGTGAAGGTAGCTGGAAAGCGAGGTCACACCAAGATCGTACGGCTTTTGGAGAGATACGGGGCACTGCCCTATGGGGGTTTCTTACCATCCTCGCCTTGTCCGCAGCAATCCAAAACCTCCACCATGAAGACGCAGTCGTCTGGTGTCACGTCAGCCAGCTCAAGCAGTACTGGGGAGACCTCCAGGGAACAGGTTCTGCCTCCCTTTCAAACCCATCACGCAGCCAGCTCGTCATCATGCTCCCCTGGATCCACCACAGAGAGGTACAAGTCTCTGGTTGCTTCAGAAAACTCTGTCCAGAGCTCAAAGACCTCATCCTCCACTTATCACTCCATGGCCACAACACAGACTGTACCAGTGGACAGCCTGAGCTTCACCCAGCAGATCCAGCAGCACTCGCTTCCACGCAGTCGAAGTCGGCCCTCCACCATGGTGTCTCCAAACTCCACTCTGCGCAGCAATGGCAACATGCACAAAGTCAGCCAACTTCCACCAGAGCCCTCTGGTGACGCCTCTTCTCCAGAAAAGCCCGGGGTGGTGTCCAGTTCCGTGATGGCAGCTGGGGACCGTCCAAAGCCCAAACAACCCTCCCTAATCCATAGGGCCGGGGGTTCTCCGATGAGTCTCCAGCCATCTAGTGGAGGAAGGTGGAACTCAGTCATGGCCTCTCTGGGGGTGACACCTGGACAAGAAAGTCCCATTCGTCCACCAAAAACAAGGGAAAGCCCACCTCTTGGGTACCCCGTCTCAGGGAGTCCAACAGGGGGCCCAGGGCCACAGGACAAGGATGGACCTCACAAGCCTACCACGTCACCTCTCTTCTGTCCTGCAGGGAACCTTCCCAGTGCCTTACCGGCAGAGTCTATGTTTGCCCTCACCTCCATGGACCCACAGTTGAACCTAAAGCAAGCCATTAAGCTGCAGTTCGAGGGACCAACCAGTGCTGTTCTTTACAAGAGGGAAACCCCTTTGTAAGGTCGGTGTGGGAATGTGGAACTCCCAGTGGAACAGCTGTACGGGGTGCAATTGTTAAGCTGGTGTGAAGCAGTGGAGAGGAACTAACCACTAACTCTGTGAGCCTTCTTGGGTTGGTCGAGCAATCCGAAAGACTTCAAACGCCTCATGTTTACATTccagccttttttttcttttttgtgaagCAACCCTTTGTAGAATACTTGCAGAGCTTTGCTGCAGATGCAACAGTCTATCTTTATATCGCAATTACTTTATTAACTGGCAAACCCTCCACCCAAGAGTGTCCGATTGTCGCCTTCCTATGAAGTATGGGACTTTATTTCCAGGGTGGAGACGGAGAGAGGTGCATACGTTACacaaatctgttttctttatGAGAAATATGATGTGATCAGACAAGTTAGACTTCAATGTAGAGAGAGATATGTACATGGGATGGTATGGAATGGTGTTTAATACACAGCCTGACAGCCAGGGAACTGTTACAGAATTTAATGGCAGCCCTCATATTTCGGAAATGCATAAAGAGAGGCATCCTACCAGAAACTCATTACCTTGAAATTGCATTGCCAGATGATAATGTAGCAGAATGGGGGTGTTCTTAAACCTCAATGAAAttgaataatttttaaattgaattcagttcaatttccaatggaaaaaaaaaacccatttAGTCTGCCTTGAAATTGATCTGCTCTTGTCTTTCTCGGAAATAAAATggcaggtaaaaaaaaacatgggggagagaaaaaagcagGACAATTATTTAAGTAGCATCCATTTGTAATATTCTTCCAAGTCTTGGATTATGTATTGTGGTGATTAAATTACAGCTGGAGCCAAGCAGCATGGGGGTTTCAATGTACAGTAGCTCACATGATGTTTGAACATAAAAGACGAATCCAGACAAGTTAAACAATGGGGACTTTTGTGCATACAAAATCAGCTTCTGAATGGAGACCCTTGTGCCTGTGTTTGGGGAGGCTGAGCGCATCCCAGAGAGTGCACTGCCTTCGGGGAGCAAAAAGCATATAGCATCTGGGTATTAGATGGAGCTTGAGGAGAGGTGTGTCACTGGAGTAAGTACTTATCAGCCTTAGACCAGGCGAACACAGATTCTGCATAACAGAGAAACTAGCCCTACAGCTGATTTAACCCTTGTGTTGGAGGCTGCTGACAGCAGAGTCTCTTAGAAAGACaagcagatgtatttatttatttttccccattcaGAGATGAGTATTCAGCAGCTCGTGTTATCAGAAAGGGCTGATCGGAGCCAAAGTGTAAATCTTATATTGAAGACAGTATACTGAGAAGCAAGGGCAATTGCAGAGGTGCATCTCTGTTTAGGTCTGTGTGACTAGTCAGGCAGTCTAACTCCAATCTTTTTTCAGCCAGTATTTTAAGGATTGTAAGGGAATTGTAGCGCTGTCTAAGACATCAGTTTGCTGGcacaaatattgtaatgtaacaATATGGCCTTATTGTAACgttcaaaagtaaaaatgtcATTTAGGGGCAGAATGAATTGGTCTTTGTGAGGGGCAGTACAAAGTGTGAGGGTGATGCTGGGAAAGttacatgcattttacattaacTTGACTATACAAGTGTCGGGTAGGGGAAAAGAATGAGCAGCAAtgcataatgtttttaatttttatataacattttaacttGAGCACTGTGCTTAGGTATTATATAAGCAACTGTATAGGATCTTGTCTTGTATCTTTGCCATTGCTAAAGAGATCTATGTGCCACAAGGTATAGCTTCACTTTTATGAGCCACTCAAATATCTGAGGACCTCCCCTGAGGGAGTCTTTTAGCCTTAATTTTACATACACCTCCCTTCAGTTAACAGTTATATGGGACCTGACCCTCTATGCTGGTCTATCTATATAAAGCAAAACTCTTATTTAtgaaaacctctctctctctctctctcaaatgtaatacatttaaaagggtggagttaaaatatgaaatacaggtGAACATAGccgttttattttcttgaaggtttttccattcattctttaaaaaattacCTGTGCCCCCCTTGACTGCTGTACAGCACAATCCTGAAGatcagcattaaaataaattggggGTGAGTAGCTGCAATTAATACTGTTCTTCCTCCCAGGtggcaaaatacagaaaactgcAGCTGACGAAGCAAAAACAGACAAGCATATTATGTTTTCCTTAAAGCAACAACCAGTTTCCTACTTGTAGGAATGCGGTGGATCGGTGTAGCAATGATTAGGATGATGATTACtcagtggaaaaaaatgcaatatgtacAAGTTTACACAATGTTTACAGACTGGGTTTTCTTTCGATGTACTTAATACTGAGACCCTAGGGGTTAGTTGTAAACATTGAACACAAAAATCAGGATAATGATGTGATAAACAGGAATTTCCCTCACACAAGAAACAACTAATATTTGTACAGACCTGCATTCCTCAGTTGAAAATGATAAATCTCTTGATAGATTTATCCCGTTTGTTGCTCGTGCTTGCTGTTTGTGGGGTGTGTGCACACTTCTGTGTGTCCCAGGAGAAGGTGCTTCTGACTTTATGCATATTTcttgtgtttaaacatgttGATACTGGTTCCATATATCCCAGTAcaacacagaaatgtttttctttgttggtggtgtttttttgttttatgatgatTGTATGACGATTTAATGATCTCTTATTGGTGGTGATTTGTGCGGATGAAGCTCTCTTTCGTTATAATATGTCCAAAACTACTGTGGGCCgagcttttgtttattttgtcttttaaaaaaaacctgtctgCCTATACAGTTTTTATCAATGTAAGGCACTTTACAAAATTGTTGTCCCCTAACTCGTCAACAATATGTATTCAATATGATTTAGgggttttcttctctttttacaagttcttatttattttaagggggGAAGAATATCATCTGAACTAACCCATCTGACTTTGTCATTGACATCTGTCAATTATTTAACagatctttttttgttttggaaaaccTCCAGGTAACATGACTAACAAAGCAGAGGTACCACAGATTGGGAAACATTTAGGTCCTGCCATACACATTGTGACACACTCAGTGTTCATGTAACACTTATAAATCAGTAGAAATACATGAtactattgttttgttttcactgtcgATGACAATCAAAAGTATTTCTGAACAGATTCTAGTTGAGAATATGGTGTGTTATCTTAACACATGGTGAGCCACAGAAATGTAGGATTACATCATAGCTGGTTTAACAGCACCAAAGTTGCACAATTAACAGGATCTGTTTTGTGCCAATGGAGACCTCGCATCTGCTCCAGCCAAGCTGTCTTGTTCAAAAGCCATAGGAAAAAATATAGTATTCTGGTATCTTTGAggcctgaaaaaataaatgcctgtgTGCATTGATGGCATATGGAtcacaaaaatgaacaaaaaatgtaaactattgtaaaaatattgcaatttctttcctttttttaaataataataaacaaactttattgtaaaatac

Function

GO: NA

KEGG:

id description
K21440 ANKRD50; ankyrin repeat domain-containing protein 50

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014781 True 7422 mRNA 0.48 3 30907169 30917566

Neighbor

gene id symbol gene type direction distance location
AMCG00014771 NA coding upstream 56027 30847172 ~ 30851142 (+)
AMCG00014768 NA coding upstream 166025 30728363 ~ 30741144 (+)
AMCG00014774 NA coding upstream 196749 30700206 ~ 30710420 (+)
AMCG00014779 NA coding upstream 246574 30659601 ~ 30660595 (+)
AMCG00014772 NA coding upstream 297065 30594129 ~ 30610104 (+)
AMCG00014784 NA coding downstream 105977 31023543 ~ 31027002 (+)
AMCG00014783 NA coding downstream 124325 31041891 ~ 31044741 (+)
AMCG00014787 vangl1,LOC106574540 coding downstream 323735 31241301 ~ 31264255 (+)
AMCG00014788 poglut1 coding downstream 380184 31297750 ~ 31308262 (+)
AMCG00014792 NA coding downstream 395407 31312973 ~ 31330675 (+)
G72769 NA non-coding upstream 60748 30846162 ~ 30846421 (+)
G72768 NA non-coding upstream 62499 30841560 ~ 30844670 (+)
G72767 NA non-coding upstream 70000 30836836 ~ 30837169 (+)
G72426 NA non-coding upstream 1714891 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 1746744 29157025 ~ 29160425 (+)
G72783 NA non-coding downstream 38339 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 85806 31003372 ~ 31003788 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding downstream 360521 31278087 ~ 31287434 (+)
G72861 NA non-coding downstream 544580 31462146 ~ 31463811 (+)
G72875 LOC103376870 non-coding downstream 606749 31524315 ~ 31592105 (+)
AMCG00014777 NA other upstream 94882 30764351 ~ 30812287 (+)
G72605 NA other upstream 1055348 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 1060583 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 1628020 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 1650815 29247875 ~ 29256354 (+)
G72785 fam160a2 other downstream 60650 30978216 ~ 30978825 (+)
G72786 NA other downstream 62004 30979570 ~ 30980252 (+)
G72787 NA other downstream 72497 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 225857 31143423 ~ 31147877 (+)
AMCG00014793 NA other downstream 595242 31512808 ~ 31523187 (+)

Expression


Co-expression Network