AMCG00014782


Basic Information

Item Value
gene id AMCG00014782
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30922355 ~ 30925207 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014782
ATGCATGCCAACACGCAGGAAGATGATCTTCCCAGCTGGGCACCCCAAGGGTTGCTGGAGCTGGAAAGGTGTCGGCAGGATCTGCAGAGCCTGAAGGACCAGCAGATCCAGGAGCTGGAGACTGCGTCCAGGTCTTTTGAATGCGCCTTGTTGGGAGCACAGAGGGAGGAACGAAGACTAATGGACAGGGTGGAGCAGGAACACCAGGAAGTCCGGCGTCTCTTGGAGCAACTGCAGAGGGACAACGTGGCCAGAGTGCAGGCTATGCAGAACACGATTGACGAGAGGATCTTGAATCTGACGCAGCTGAGAGACCGTATGCAGCAAGGGGGCCAGAAGAGCCTGGGCCAGGATCTCCAGCAGAAGCTCTCCGAGCTGCTGCCCAGGGAGCTCACTCTGTCCCTGAAACGGGTCAGCTTCCAGCCCAATCCCAATCTCCCTAGCCTTTTCGGGAAGATTAGGGTCCAAGAGCAGAGCCTGCGTTTCTCAGTTTCTTGTGGAGGGCAGAGCAGGGGTGCTTGTGTTTCCTCCATGGGGGTGAACCAGACCCAGTATAGGAATGGAAATGCAGGAGAGGCTGCAGATAGCCAAGTCACCAGACACATGCCTGAGAAACCAGTTACAAGCAGTGGGAGTGTAAGGGTAGTAAGGAAGATCCGGATCTCACCTAGAGCCGAGGAGACAGGTGATGAAAAGGGGTCCCCGAGAACCGAATCTACTTTAGTTAAAGAAGCTCAGGTGAATGATACTTACCGTGATGGTGACATAACGAACAAACCAGGGTTGTCTAGCAGCCCACAGCTCCCCAGGGTTCCTGCAATAGACCTGTCCACTCTGTCTGACCCTAATACACATATTCTTGGGGTAGGGGGTGACAACGATGAGGATCTGGGGCTCTTTCAAGCCGTTCCTGCATTCCTGAGTGATGGGGAGTCTGAGAACGGGGAAGAGGAGGTGGCGGTTGAAAACAGCATGGAGAGGAACCATGTCAGAGACAGCCCTGTGTCCAGTAGAGCTCTGATTCTGTTGTCCAGCCGCCGACCTTCTGCCCGTCATGAAGGAGGGCTGGAGAGGACGACTGGAGTCCGAGATTCTGCATTTACCCAGAGCTGCCTTGATCTGTCCCCAAGTAACAAGCCCCCTTCTCGTACTGACCTGTCTCCAGAGGAGACTAATGCTGGGGTGCCAGGAGAGATATGGAGACCGGCTTCACCAGCAGACAGCATCGACTCATCCTACACATTCATTGTCAACTCTCCCAGGGATTACAGTATCACTCTTCGCCGGGCTGGTGTTGACCCACGCCTTTCAAAGTCCACAGTAGATTTGTCCAGAAAGGGGAATGGAAGGCTGAAATTGAAGACCTTCCGATCAGCCAGAGAGCAGAAGCAAGGGGGTagaggagaggcagagagggaggctAAAACAGACCAGGCAGAACTAGCAATCCAGGAAGAAGATGGAGAAAGGCAGGATCAAGTGCGTCTGATTAGTAAGTTTGGAAAGTTTGGCTCAGGGCGTGCAGAGCTTAGTCTTCCAAGCGGGGTCCACGCCATGCCACAGGGCCAGCTGTACGTGGTGGATTGTGGGAATGCCAGAGTGCAGGTGACAGACACCCGGGGCAACATCCTGCAGCAGGTGTCCTTCCAGGGTCACGAGGGCGCTGCAGGCCGTCGCTGCCGTAACTACTTTGACGTGGCTGTAAATGGGAAGGGACTGATAGCATTGAGCTGTGCAGCAGAGAAAGCCCTGCTAATATTTAGCAGACACGGGCGCCGACTTCAGGcatttgggggagggggagacgAGTTGGAAGCCCCGAGGGGAGTGGCAGTCAATTACCACGATGAGTTCTTGGTTGCTGACACTCGTCGTGGGACTCTGACTGCTTTTAAACTAGATCCCAAATCTGGCAGTAAGCTAGAGCGCACTGTAGTGCCCGGCTTCTGTAAGCCCTATCTAGTCGCAACTGGTCTGGCCACAGGACTGGTTGCCGTCTCAGAGAGGGGGAGTGAGACAGGGGGAGCACCCTGCGTTAAGGTCCTAGGCCCCAACTGGAACACCCTGAGGATCCTGGGCATTGACACCAGACTGGGCCCAGTACTGTCCTGCCCCTGGGGAGTGTGTATCGACAGGGATGGTGATGTACTTGTTGCAGACTGGGGTAAAGAACATAGAGTGCTCCTGTATTCTGCCCAGGGCTCGGGGAGGCCTGTTGTGACACAGGGGTTGAACAGCCCCAGAGGTCTGACTCTCCTGCCAGAGGGACATCTAGTGGTGGCAGACAGCATGCAcaactgcattaaaatattcCAGTACAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014782 True 2325 mRNA 0.55 3 30922355 30925207

Neighbor

gene id symbol gene type direction distance location
AMCG00014780 NA coding downstream 159294 30759157 ~ 30763061 (-)
AMCG00014766 NA coding downstream 227030 30689042 ~ 30695325 (-)
AMCG00014765 NA coding downstream 233318 30668526 ~ 30689037 (-)
AMCG00014764 NA coding downstream 276016 30630436 ~ 30646339 (-)
AMCG00014763 NA coding downstream 295008 30620505 ~ 30627347 (-)
AMCG00014785 NA coding upstream 27264 30952471 ~ 30979877 (-)
AMCG00014791 LOC106574540 coding upstream 336509 31261716 ~ 31279130 (-)
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding upstream 354107 31279314 ~ 31292735 (-)
AMCG00014789 NA coding upstream 411906 31337113 ~ 31345430 (-)
AMCG00014796 NA coding upstream 544352 31469559 ~ 31471622 (-)
G72693 NA non-coding downstream 527017 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 660751 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 710959 30211142 ~ 30211396 (-)
G72659 NA non-coding downstream 755429 30166717 ~ 30166926 (-)
G72646 NA non-coding downstream 867182 30054340 ~ 30055173 (-)
G72790 NA non-coding upstream 20883 30946090 ~ 30947343 (-)
G72791 NA non-coding upstream 24903 30950110 ~ 30951375 (-)
G72862 NA non-coding upstream 536972 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 541285 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 555641 31480848 ~ 31485466 (-)
AMCG00014775 NA other downstream 75555 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 1524050 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 2589873 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3552828 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 3617758 27285420 ~ 27304597 (-)
G73047 NA other upstream 1337960 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 1530099 32455306 ~ 32555945 (-)
G73127 NA other upstream 1672255 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1869798 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 2145042 33070249 ~ 33119328 (-)

Expression


Co-expression Network