AMCG00014785


Basic Information

Item Value
gene id AMCG00014785
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30952471 ~ 30979877 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014785
ATGAGCTGGCTCAGCCGGCTGAACCCACGAGCCCCCGGGAATCGGGCCAGTCGCAATGCTGCGCCCTCAAATCCGGTCATGGCTGACCCGGAGACATGCCTGATGGTCTTTCAGAACCACTGGAGACAGATGTCGTGGATCCTGGAGCAGCGCGAGAGCTCCATCACTGGTGCAGCAGACGAGCTGAGCGCCGTGCGGAACCACACCGATCAGATGCTGTGCCTGCTGGCGGAGGAGCGGCCAGGGGACCAGATGGCTATGGGACCCATTCTGGAGCTGGTGGTGTCCGAGAATATCCTGGAGCGGCTGGTGCAGTGGCACCTGCGCCGTGGCCTGGACCCCGACAGCCAGGGGGCGCTGCTCAAGCTCTTTGAGATGCTGATCGGCCAGTCCCAGCAGCCCTTGCTTCAGCACAAGCCCGTGCTGCAGCCCCTCCTCTCCTTGCTGAGCACGTGCGCCGATCCCCAGCTGGGCTCTCCTGCGGTGGAGGGGAgcctggtgctgctgctgaACCAGGTGTGCGTCTCCATGGCCAGGGAGCCCTCCATCTTGGAGCTGCTGTTCCGTGCTGCCTCCCAGCAAGGCCCCACCAATCTGCTCATCTTCTCCCTGCTGGTGCCCTTCATCCACCGTGATGGAGCCATTGGCCAGCAGGCTCGTGACGCCCTCCTCCTTGTCATGGCGACCTCCGCCGACAGCCAGGCCGTGGCACAGTACATCGCCGAGAACTCCTACTTCTGTCCGGTACTTGCTACTGGTCTGAGCGCACTCTATTCCTCCCTGCCCCGCAAGATTGAGGTGCGAGGGGATGACTGGCATGCTTTGAGGAGAGAAGACTGGATTGGCGTCGCTTCTCTCGTCCTGTTCATGAACTCACTGGAGTTCTGCAATGCTGTCATACAGGTCTCCCACCCTCTAGTTAAGAGCCAGCTTGTAGATTACGTCCACAATGGCTTCTTGGTGCCAGTGATGGGGCCTGCGCTACACAAGTCCTCTGTGGAAGAGATGATTGCCAGCACGGCCTACCTGGACCTCTTCCTGCGCAGCATCTCAGAGACGGCCCTGCTCAAGACCTTCCTGCGCTTCATCCTGCTGCATCGGCACGACAACGACACCATCCTGGACACCCTGCTCACCAGGATCAACACCAACTCAcggCTCTGCATGGTCTCACTGAGTCTGTTCCGGACTCTGCTCTCCCTCAACTGTGAAGACCTCATGCTGCAGCTCGTTCTCAGGTACCTGCTCCCCTGCACACACGTCATGCTGAGCCAGCGTAGGGCCGTCAGGGAGACTGACCTCTACGGCAAATCAGCTGACAAGTTCCTGACACTCATCCCCGAGTGTTGCCTCAGCGACACAGGGCTTTCCGTTGACCGGGACGAAGACTTGGCTTTCTGGCCCAAAGGGCCTGGGAGCCCCAGTGCGGAGTCTCCCATCTCCAAGCCCAGTACCCCATCCCGCATCGCCATGTTTATCCGGCAGCAGAGCAGCGGAGTGTCCTCCAGCTCCGAGCCACCTCAGTCTCCTCGCCACACAGCCACCAGTGGGACGCTCTCTCCGGACAGCCCCATGCACCAGGCTGCTGAGAGCCCCGATTCAGAAATGGGATACCTGGAGTACCTCCGAGACGCCCGCCGGAACATCGAACTGTGTGCCTGGGCATGTCGGGACTGGTCGGCCCCCTACGATGGGGAAGACCCCTCCCCCAGTTCCGTagtcccccctccccatccAGCTGGGGGCTTGACTGTCTTCTCTGAGCACTTCTCTAGTCAAGGGGCCCCCGTTCGGTCCCGGCCAGACTGGGAAACCCCCGAGTTGAACCCCAGCCAGCAGAAGTGCCCCAAACCAGACTTTGAGAACATAGAGCGTGACAGTGGGGAGTGGGACATCACCATCAACAAGAACTGCATTAGTGTAACGCCCCGCACCAAGAAACGCAGCCTGCAGCGCGAGTTTCCTGACCCGTTGCACTCTTCCCACCATCCTGGACTGCCTCTCCTCACggcccacccccacctcccgGCCGGAACGGAGGGGCAGCTTTCCCTCTTCAATGGGATGGGGCAGGCGGGGTCGGAGTCGGGGCCGGGGTCCCGGTACAGGCAGGATGGGGGGATGGAGGTAAAAAAGGTGCGGAGGGACCCTGAGGGGGAGAACTGTGGGGAGCAGAACGGGGGCCAGAGCATTGCCTGCAAACCAGAGCCCAGTCGGCTGTTCCACAGTTTAGGGGAGCAGGGTCATGGGGAGGGGCAGGGTCTCACTCAGTTGTCTCAAGCTCATGGGCAGACAGCTTCCCAGACTAGTGAGGGCCAAGACTCCGGCCCCGGGCAGCCGACAGTGACTCCTCGGAACCTGGAGTCAGTGGAGAGCCTCATCGAGGAACTGCTGGACCGGGATCCCAGCGACGCCAATGGGACAGGGATTAGCATCGAAGCATTCAACCAGGAGCTGAGGGAACTAGAGGAGACAGTGTGCGAGAGGAGGGCCTACAGAGGAGCTGAGCCACCTAGCAGCGCCAAAGATGGCATCCCTCCAGCCCCCACCCAcaggaaggaggaagagaggcCACCCTCCCCAGACTGTGACCTCACCAACCCCAAACCGGAAAGCACTGGGCCCTTGCTGTGCAGTCCAGCTCGTCCCTTGGGGCAGCCACTCAGCCAACCCTACACAGGTCCCTTCATTGCGGTGATCTTTGCCAAGCTGGAAAACATGCTGCAGAACTCTCTGTACGTCAACATCCTTCTCACTGGGATTGTAGCCCAGTTAGCCTGCTATCCCCAACCCCTGCTCCGCTCCTTCCTGCTAAACACCAACATGGTCTTTCAACCCAGTGTCAAGTCGCTTATCCAGGTTCTGGGCTCAGTCAAGAATAGGATTGAAGCTTTTGCTGCAACTCAGGAGGACTTCCCAGGGATGCTCCGCAAAGCCAGAAAGTACCTGGTGGCCCGAGGGAAGCTGGACTGGGCTGACTCGCCCATCGTTGTGCCAAACCTCCGCCGCACTGAAACACTAGTTAAAAGCCGCAAGCCCTCTCTTGGAGACCTGATCTTGCGCCACACCAACAGCCCGACCCGCGCCCGCCAGGCTGCCCAGATGGCCTTTGCCCATGTGCGGGATGGCGGCCAGGTCCTGCACAGTGCCCTGTTCAGGAGCTCGGGGGCAGGCACCATCGAGCGGCAGAACGAGGCGCTGCGGGTGAAGAACGCCGTCTACTGCGCTGTCGTTTTCACCGAATTCCTCAAGGAGCTGGCCGCCTTGGCACAAGAGCACGCAGTGTCCTTGCCCTTCCCCCGGAGCCAAGACACAGAGGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014785 True 3324 mRNA 0.61 11 30952471 30979877

Neighbor

gene id symbol gene type direction distance location
AMCG00014782 NA coding downstream 27264 30922355 ~ 30925207 (-)
AMCG00014780 NA coding downstream 189410 30759157 ~ 30763061 (-)
AMCG00014766 NA coding downstream 257146 30689042 ~ 30695325 (-)
AMCG00014765 NA coding downstream 263434 30668526 ~ 30689037 (-)
AMCG00014764 NA coding downstream 306132 30630436 ~ 30646339 (-)
AMCG00014791 LOC106574540 coding upstream 281839 31261716 ~ 31279130 (-)
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding upstream 299437 31279314 ~ 31292735 (-)
AMCG00014789 NA coding upstream 357236 31337113 ~ 31345430 (-)
AMCG00014796 NA coding upstream 489682 31469559 ~ 31471622 (-)
AMCG00014794 NA coding upstream 549120 31528997 ~ 31578588 (-)
G72791 NA non-coding downstream 1096 30950110 ~ 30951375 (-)
G72790 NA non-coding downstream 5128 30946090 ~ 30947343 (-)
G72693 NA non-coding downstream 557133 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 690867 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 741075 30211142 ~ 30211396 (-)
G72862 NA non-coding upstream 482302 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 486615 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 500971 31480848 ~ 31485466 (-)
G72874 NA non-coding upstream 535553 31515430 ~ 31519932 (-)
G72919 NA non-coding upstream 717778 31697655 ~ 31698012 (-)
AMCG00014775 NA other downstream 105671 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 1554166 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 2619989 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3582944 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 3647874 27285420 ~ 27304597 (-)
G73047 NA other upstream 1283290 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 1475429 32455306 ~ 32555945 (-)
G73127 NA other upstream 1617585 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1815128 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 2090372 33070249 ~ 33119328 (-)

Expression


Co-expression Network