AMCG00014789


Basic Information

Item Value
gene id AMCG00014789
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31337113 ~ 31345430 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014789
ATGTGGATGGCGAATATAACTGTGCCCAGGCATCGCCTCACACCAAGGCGTCAGAAGATGTCCAAAGATGAATTGGAGAGGGGTGGGCAGAATGTGCTCTTGATCCTGAAAGGTCTTACAATGTCATCTGCCACTAATTTCACACAGAGCCTGGAGGAATCCCTGAAGAAGGTCTTGGTTGACTACCTGAGCAGCTGGAACAAGAATCAGACCCAGGCAAAGGAAATCCTGGACAAGCGTCTGGCGGAAGAAAACTTTGACAACGTCATCTGGTACCTGATGGTGATGATTGGCATGTTCGCCTTCATCATCGTGGCCATTTTGGTGAGCACGGTGAAGTCGAAGAGACGAGAGCACTCCGACGACCCCTACCACAAGTACATCGAGGAGGACTGGACGGCCAAGCTAAAGAATCAGATTCTCACCATGGACCATAACTTGCACACAAACCCCACGACAAAGTCCTACGAGGAGCCCTAATCACCATGACCTCTTCCCATTGACTGGCCATAGCAAAACTCAGAATCACAGTAGAGGAAGAGGTTCAGGAATTGTAGACCTGTAGCGCAGAAGACAGCTGATAGTTTAGCACCACCATGATTTCACCATCACAAAGTAAGCACAGAAGTTTTGCCATCTTTccttttccccctttttaaatATCACCTTTGCAAGacagttattaaaatatcaaCAATCAACACCTTGGAGCCAACTGTGTTGTAGTTGGACTGAGCAGTACTAGTACATTTAAGATCAGTACCAAAGATTTGTAACTAAAGTTGTGAATTAtactaattattttaagaatgtgATCTTTAATGCATTGTTGCTTTGTTTCAATCATtacattcaatcaatcaaataaataaatgggctGTCGAGCAACAATCACACTGTAATTGCCCTGGTGTTATGCcatggcaataaataaatcttaatctCATTGAATCATTGAAATGACTGGGTATTGATGATTCTTttttactgaagaaaaaaaaatcctctgcaagaaatgtaaaagtaagttatacagcttttaaataatgtattcttcttcttcaacTGGTTATCAACtttacaattaatatttaagCATTATAAGTTTACagaattaaataagttacataTAATATGCCCAGTATTTTACAAACTGTGGCATTGAAGTTGATGTAATTATACCAGAGACCCAATGCTGACATGTGTAATCAGATTACCATCAAGCTGTTTTTTCGATTGTGTAAGTAGGTTGTGTAgcaatgtaattgttttcacttttctgGTGCAATTCACTATACCCACTCTAGGTGGCAACGTTGTCCTGCTCCATAGCTCCCCAGCTTCTCCAGCCTGCATTCCTCCCAGTGTTAATTGGGAAAGTGACCCAGCTGCTGTGTGGCCTCTTGTTTACAGTGGGGGCTGTGTTCATACACAGATCAACAGCTGAGAAGCCCCAGGCACACAGTAGTTACATGCTCCATGTAACTCTACCTTCCATTGCAGTGTTTACAGCTCCACATTGATCAGAGATTTTATTTTCGCTAAACCAGGTTgtcacatgaaaaaaaaaaaaagttacaatcCTTCTGTATTCCCTGTGCTTAGTATTCTTCCAAAGTCTGTTAAGAAACTGTTAAACTCAGCTCACACATTTTCAAGGGCTTGTTGGAGTTCTTGTGGAAAACTAGTAAAAGTGTTAAATGTGATTAATGCTAAAGCATTGTCTACAAAAATGCACAGATCATTTGTCATCTCATCAAAACagtatttctctcaaattaaGAACCCACATTCCTCGTTTGCTTTATCATTActgctacatttttttaaatcgcCTTTAGCATGGTTTATTAAGTGTGTATCAGATTGTTAACTCATCAGTACAGTATTTCTACCTCATGGACACTGACAGCCAAAATGaatttaacataattttaaattaattaaaatgaacttaaTTTTAAGATGCGGTTAGCCTTTCTTTATGTGTCCATACGTCCACTCCCAAGCTATTCAAATGTTGTAGTCAAGGTAGATGAATCTTTCATCAGTAGGAGTTATAAATTGGGGAATTCATATggtatattcatattcatatggaattccAATCTGGCAATAGGATGTACATCATTAACGCGTTTGACCTTTTTGATGAGTTCACAtgactttaataaataaatccttcatTTGTATTAATGAGCGGAATGAACCGTAGTTTAAATTTACAATCTGTACataaaatttttaaaaaaactcacacaaattcataatcacaaaaataaa

Function

GO: NA

KEGG:

id description
K04896 KCNE2; potassium voltage-gated channel Isk-related subfamily E member 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014789 True 2283 mRNA 0.38 3 31337113 31345430

Neighbor

gene id symbol gene type direction distance location
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding downstream 44378 31279314 ~ 31292735 (-)
AMCG00014791 LOC106574540 coding downstream 57983 31261716 ~ 31279130 (-)
AMCG00014785 NA coding downstream 357236 30952471 ~ 30979877 (-)
AMCG00014782 NA coding downstream 411906 30922355 ~ 30925207 (-)
AMCG00014780 NA coding downstream 574052 30759157 ~ 30763061 (-)
AMCG00014796 NA coding upstream 124129 31469559 ~ 31471622 (-)
AMCG00014794 NA coding upstream 183567 31528997 ~ 31578588 (-)
AMCG00014795 LOC107746280 coding upstream 248961 31594391 ~ 31620377 (-)
AMCG00014797 NA coding upstream 355197 31700627 ~ 31707522 (-)
AMCG00014806 NA coding upstream 424143 31769573 ~ 31789737 (-)
G72791 NA non-coding downstream 385738 30950110 ~ 30951375 (-)
G72790 NA non-coding downstream 389770 30946090 ~ 30947343 (-)
G72693 NA non-coding downstream 941775 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 1075509 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 1125717 30211142 ~ 30211396 (-)
G72862 NA non-coding upstream 116749 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 121062 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 135418 31480848 ~ 31485466 (-)
G72874 NA non-coding upstream 170000 31515430 ~ 31519932 (-)
G72919 NA non-coding upstream 352225 31697655 ~ 31698012 (-)
AMCG00014775 NA other downstream 490313 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 1938808 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 3004631 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3967586 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 4032516 27285420 ~ 27304597 (-)
G73047 NA other upstream 917737 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 1109876 32455306 ~ 32555945 (-)
G73127 NA other upstream 1252032 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1449575 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 1724819 33070249 ~ 33119328 (-)

Expression


Co-expression Network