AMCG00014791 (LOC106574540)


Basic Information

Item Value
gene id AMCG00014791
gene name LOC106574540
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31261716 ~ 31279130 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014791
ATGAAGACCTGTCTGAATGAGGCAGCCAGTGATAAGCCATCTGGCAATGTACTGGGTCATTCATCTGGTGTCAACTGCTACTCTGAATACTGGAGATCCAGTGGGGTGAACTGTGAACAGCGGTCCTTTGGAAAGATGTCAGTGCTCAGGCCAATGTCTCTCACAGGCTCTATAAGCCCGTCAGAAGCCTTCACCCCCTCTTCCCCTGCCTGGTCATTTTTGGCGCAGACAGAAATGATTCTGTATAAGGGTTCGATTCTCTGCCCCCATGTAAAGATGGTACACAGGATGGCAAAATCCAAGGACATCAACCACACACAGAAAAGACAAGAGCACGGCTGCTTTGCTAATGAGGAAGGCCAGGTGCTGCTGGATGCTCTCCATGCTGTGGCAGTGCTGCTGCCTCGTGGTGCGGAGGTACTTCTGCAGTGCTCGGGCCATGGAGGGGAAGATGGCTTGAGCGGCCTCTCGGGGATCCATCACTTCCCCGGGGGCTTTCTTCTGATCCTCCTCTTGCATGCGCTTGATGTGGGTGAAGGCCTCTTCGACAGCCACCACCAGCCTGAGGCAGGAGACAAAGCATAG

Function

NR:

description
PREDICTED: vang-like protein 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014791 True 585 mRNA 0.54 5 31261716 31279130

Neighbor

gene id symbol gene type direction distance location
AMCG00014785 NA coding downstream 281839 30952471 ~ 30979877 (-)
AMCG00014782 NA coding downstream 336509 30922355 ~ 30925207 (-)
AMCG00014780 NA coding downstream 498655 30759157 ~ 30763061 (-)
AMCG00014766 NA coding downstream 566391 30689042 ~ 30695325 (-)
AMCG00014765 NA coding downstream 572679 30668526 ~ 30689037 (-)
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding upstream 184 31279314 ~ 31292735 (-)
AMCG00014789 NA coding upstream 57983 31337113 ~ 31345430 (-)
AMCG00014796 NA coding upstream 190429 31469559 ~ 31471622 (-)
AMCG00014794 NA coding upstream 249867 31528997 ~ 31578588 (-)
AMCG00014795 LOC107746280 coding upstream 315261 31594391 ~ 31620377 (-)
G72791 NA non-coding downstream 310341 30950110 ~ 30951375 (-)
G72790 NA non-coding downstream 314373 30946090 ~ 30947343 (-)
G72693 NA non-coding downstream 866378 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 1000112 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 1050320 30211142 ~ 30211396 (-)
G72862 NA non-coding upstream 183049 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 187362 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 201718 31480848 ~ 31485466 (-)
G72874 NA non-coding upstream 236300 31515430 ~ 31519932 (-)
G72919 NA non-coding upstream 418525 31697655 ~ 31698012 (-)
AMCG00014775 NA other downstream 414916 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 1863411 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 2929234 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3892189 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 3957119 27285420 ~ 27304597 (-)
G73047 NA other upstream 984037 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 1176176 32455306 ~ 32555945 (-)
G73127 NA other upstream 1318332 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1515875 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 1791119 33070249 ~ 33119328 (-)

Expression


Co-expression Network