AMCG00014794


Basic Information

Item Value
gene id AMCG00014794
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31528997 ~ 31578588 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014794
CGAGCCCAGGAGGATGACCCGGCAGGCTGGCCAGACCAAGCGCAGGAGCTGGGAGACGAGCCCCCAGCCCCCCTGCCACCCCAGCAGCCGTGGATGAAGAGAGTGCAGGAGGACGATGGCAGGGGTCGCATGGAGATGCAGGACAAACTGAACAAGCTTTTCATCCAGCCTCCCGAGCCTGGGATGCTGCCCGCCCAGTCTGCATGGCCCACCACAGAAAAGTCTCCTGTGACCGGCTTTGACCAGGATAAAGTGAAGGTGGTCTTCTACAGAGCTTTGTATCCGTTTGACGCCAGAAGTCACGATGAGATCACAATCCAGCCTGGGGACATTATTATGGTGGACGAGAGTCAGACGGGGGAACCTGGCTGGCTGGGAGGGGAGCTGAAGGGAAAAACTGGCTGGTTCCCCGCCAACTATGCAGAGAAGATGCCAGAATCGGAGGTCCCCGCCAGCCTCCGGTCTGGAGCGGGTTCTGCGCCAAAACTGGCCGCCAGGGTGACTCCCACCAGCACTGTGACCCAACCCCAGCCTCAGCCCCAGGTTCAAGCGCAGCCCCAGGTTCAAGTGCAGCCCCAGGTCCAGGCCCTGCCTCAGCCCCAGCCCCAACCCCAGCCCCAGCCTCAGCCTCTGCCTCATCCACCCCAGCCCCTCCCCGCCGAGTCTGCCGCTCCTCCTCCAGCAACCACCGCAGCTTCCACCAGCAACTGGGCAGACTTCAGCTCCACGTGGCCGTCCAACAACACAGAGAAGGTGGAGGGTGACGGGTGGGATGCCTGGCCCACTCAACCCTCCTTGACTGTGCCCAGTGCCGGGCAGCTCCGCCAGCGATCAGCCTTTACCCCTGCCACCATCACTGGCTCCTCGCCCTCTCCCGTGCTGGGGCAGGGAGAGAAGGTGGAGGGACTGCAGGCACAGGCTCTGTACCCTTGGCGAGCCAAGAAGGACAACCACCTGAACTTCAACAAGAACGACATCATCACAGTGCTGGAGCAGCAGGACATGTGGTGGTTCGGGGAGGTGCAGGGGCAGAAGGGCTGGTTCCCCAAGTCTTATGTCAAACTCATCTCTGGCCCCATGAGGAAATCCATGAGTATCGAATCTGGGTCATCTGACAGTCCTCCAAGCATGAAGCGACCAACTCCTTCACCCAGTAAACCCACAGATCCAGGAGAAGAGTATATAGCAATGTACACCTATGAGAGCAACGAGCAGGGTGACCTGACATTTCAGCAAGGGGATGTGATTCTCGTAACAAAGAAGGAAGGCGATTGGTGGACCGGGGTGGTAGGAGACAAAACAGGAGTGTTTCCTTCAAATTATGTGAAACCCAAGGATTCAGAGGGAGTTGGTCCAGCTGGGAAGACAGGGAGTCTGGGAAAGAAGCCAGCCACGGGGGCCGAGCAGCTCACCCTGGCTCCGGGGCAGCTCATCCTCATCCGGAAGAAGAACCCAGGAGGCTGGTGGGAAGGGGAATTACAGGCCAGAGGAAAGAAACGGCAAATCGGATGGTTCCCCGCAAATTATGTGAAATTGTTGAGCCCAGGTACAAGTAAAACCACACCCACGGAGCCCCCAAAACCCACACTACCCAGTGCAGtatGCCAGGTGATAGGCATGTACGACTATATAGCACAGAATGACGACGAGCTTGCATTCGGGAAGGGGCAAATAATAAACGTCTTGAGCAAGGAGGACCCTGATTGGTGGAAAGGAGAGCTCAACGGAAACGTGGGCCTGTTTCCATCCAACTACGTCAAGCTGACAACAGACTCGGACCCCAGCCAGCAATGGTGTGCTGATCTCCACCTTCTGGACATGTTGACTCCCACGGAGAGGAAGAGGCAGGGCTACATCCACGAGCTGATCGTGACGGAGGAGAACTACATCTTTCAGAAGCCGTTGCTGGAGTCGGAGTTGCTGACTGAGAAGGAGGTGGCAATGATTTTTGTCAACTGGAAGGAACTTATCATGTGCAACATCAAGCTGCTGAAGGCTCTGCGCGTACGCAAGAAGATGTCAGGGGAGCGGATGCCAGTCAAGATGATCGGGGACATCCTGACTGCCCAGCTTCCCCACATGCAGCCCTACATCCGCTTCTGCAGCTGCCAGCTAAACGGAGCCACCCTCATCCAGCAGAAGACAGATGAAGTGCCTGAGTTCAAGGACTTCGTCAAGAGGTTAGCAATGGACCCGCGCTGCAAGGGGATGCCGTTGTCAAGTTTTCTCCTGAAGCCCATGCAGAGAGTCACACGGTATCCACTCATCATCAAAAATaTTTTGGAGAACACTCCGGAGAACCACCCCGACCACAGCCACCTGAAGCAGGCCCTGGAGAAGGCAGAGGAGCTCTGTTCCCAGGTGAACGAAGGAGTCAGGGAGAAGGAAAACTCTGACCGGCTGGAGTGGATACAGGCCCATGTGCAGTGCGAGGGTCTCTCTGAGCAATTAGTATTCAACTCTGTGACCAACTGTCTGGGGCCACGCAAGTTCCTTCACAGCGGAAAGCTCTACAAGGCCAAGAGCAACAAGGAGCTGTATGGCTTCCTCTTCAACGATTTCCTGCTACTTACGCAGATCATCAAACCTTTGGGCTCCTCCGGCACCGACAAGGTGTTCAGCCCCAAGTCCAACCTGCAGTACAAGATGACTGCCTGGGTGCAGAAGATCAAAGCTGCCTCTGAACTGTACATTGAAACtgagaaaaagaagagagaaaaggcaTATTTggTTCGTTCGCAGAGGGCTACAGGCATTGGCCGGCTAATGGTGAATATAGTGGAAGGAATTGAACTAAAGCCCTGCAGGTCACATGGGAAGAGCAACCCATACTGTGAGGTGACCATGGGCTCCCAGTGCCATATTACCAAGACCATGCAGGACACTTTGAACCCCAAGTGGAATTCCAACTGCCAGTTCTTCATCAAGGACCTGGAGCAGGACGTGCTGTGCATTACCGTGTTTGAGCGGGATCAGTTCTCCCCTGACGACTTCCTGGGAAGGACTGAAATCCGAGTGGCTGACATAAAGAAAGATCAGGGTTCAAAGGGACCAATCACCAAGAGGCTACTGCTCCATGAAGTCCCTACAGGAGAAATTGTAGTACGACTGGATCTACAGCTGTTTGATGAACCA

Function

GO: NA

KEGG:

id description
K20045 ITSN; intersectin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014794 True 3135 mRNA 0.56 21 31528997 31578588

Neighbor

gene id symbol gene type direction distance location
AMCG00014796 NA coding downstream 57375 31469559 ~ 31471622 (-)
AMCG00014789 NA coding downstream 183567 31337113 ~ 31345430 (-)
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding downstream 236262 31279314 ~ 31292735 (-)
AMCG00014791 LOC106574540 coding downstream 249867 31261716 ~ 31279130 (-)
AMCG00014785 NA coding downstream 549120 30952471 ~ 30979877 (-)
AMCG00014795 LOC107746280 coding upstream 15803 31594391 ~ 31620377 (-)
AMCG00014797 NA coding upstream 122039 31700627 ~ 31707522 (-)
AMCG00014806 NA coding upstream 190985 31769573 ~ 31789737 (-)
AMCG00014809 NA coding upstream 388856 31967444 ~ 31969223 (-)
AMCG00014813 NA coding upstream 692097 32270685 ~ 32285936 (-)
G72874 NA non-coding downstream 9065 31515430 ~ 31519932 (-)
G72867 NA non-coding downstream 43531 31480848 ~ 31485466 (-)
G72868 NA non-coding downstream 61941 31466492 ~ 31467056 (-)
G72862 NA non-coding downstream 65214 31462179 ~ 31463783 (-)
G72791 NA non-coding downstream 577622 30950110 ~ 30951375 (-)
G72919 NA non-coding upstream 119067 31697655 ~ 31698012 (-)
G73005 NA non-coding upstream 318352 31896940 ~ 31898945 (-)
G73046 NA non-coding upstream 677567 32256155 ~ 32256775 (-)
G73049 NA non-coding upstream 686544 32265132 ~ 32265424 (-)
G73066 NA non-coding upstream 779114 32357702 ~ 32362393 (-)
AMCG00014775 NA other downstream 682197 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 2130692 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 3196515 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 4159470 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 4224400 27285420 ~ 27304597 (-)
G73047 NA other upstream 684579 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 876718 32455306 ~ 32555945 (-)
G73127 NA other upstream 1018874 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1216417 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 1491661 33070249 ~ 33119328 (-)

Expression


Co-expression Network