AMCG00014813


Basic Information

Item Value
gene id AMCG00014813
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32270685 ~ 32285936 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014813
CTGTCAGTTTgcgttttatttaataaaactggaGTGGAAGGTTGGGTTTAGAACTAAGCGAGACAACTTAATTAAATCCAGTTCAGTATGAAAGTGTTTTCCTCCGTTTGACTGATTAGTTATCTTAATGAAAAAGGTGTGCTTAAGCTGAAAAGTATTCGTTATAATGTTATACACGTTCCTTAGTGTTTTAAAATTCACCTTGCTAAGTTCATTGCTACCCTTTTGCAATGAAATAGATACTTGAAATAGATTACTTGAGATTGAATAATTTCAGGACAATATCGGCGACTCTAGTTTTTGGAATGAAGACAGATACATAGGATATTGAGTTActatattagtttttttctcgTGATTGGAAATCAGTGTTTTCACGATTTACTTATAAACTGTAAAGTAACATTTGCATGCATActaagtattattaatatttattattagccTATATAACAGTTTGGACAGGTTTGTGAACAAGGTACTCGTAAAGTTTCACTTCCGTATACAGCTGTATAGGAGTGCTCCTGAGTATGTGGATGCGAGCTGGTGCGGTGAGCTCGGTAGTGTGCGGCGCGCTCTACTGGTTCCAGAACAGAGCGATGCAGGCGGACACGGGCTCCGCTAAGACGAAACCATGCACCACTTCTCATTATGAACTTAAACTGGTGCAGGTATTGTTCCGACATGGCGCCAGGACTCCACTGAAAGCCTTACCTGACATAGAGCAGGGGGGGACATTTCCTGGTCAGCTGACAACATTGGGAATGCAACAGCTCTATGATCTGGGAGAACGAATGAGAAGAACATACGTAGAGGAGATGCCATACCTCTCACCAATCTTTTgcccttcagaggtctaTGTGCGGTCAACCAACATTGTACGAACCATCGAATCAGCTAAGTGCCTGCTAGCTGGCTTATTCCAACAGAAACAAGAGGGAACCGTGAAGATCTTCACGGCTGATTCAGAAACTGAGATTTTGTATCCCAACTACCATGGGTGCAAACTGCTGAGAGTTCTGAGCAGCCAAAGATGGGCCGAATCTTCTCTCCTCCCCGATGTAGCTGCCGACCTTAAGAACGTGCTGAACCAGCTGGGCGTCCAGGCACAGAAAGGTCTTGATTTCATCCACATTCGAGATGACTTGGTGGCAAGAGAGGCCCACGGCTTACCCAGCCCTGCAGTGTTGCTGAGCTGGAAAAGCACTGTCGAACAGCGAGCCGTTGAGATGCTGCATTACATCTATGAGCCCAGCAAAAGGCAAAATCTTCAGCTTTGTGTTGGGCCTCTGCTTCATACATTGATGAAtaatattgaagaaaaacatcagGATAAGATGAAATCTGGACGCTCCAGGAAGCTGTACCTCTATTCTGTACATGACACGACTCTGGTTCCTTGTTTGATGGCTCTGGGCATCTTTGACATGAAGTGGCCACCCTACGCTGCTGATCTCACCTTTGAGCTGTACGAGCATTGCTCTTCCAAAGAAGCCTTTGTCAAAGTGTCTTATATTGGCCAGGACCAGTTAGTGAAAGGCTGCAGTGACATCTATTGTCCGCTGCAGGAATTTAAGAAAGTGCTGTCAACCTACACATTGGATTCAGCAGACTATGGAGCACTGTGCAACCAGTCTGATGATGTCACAAAGTGATCTTGGGTGTTGCACTTCTGTTTCCTGTTACGACCATGTTGGGCTACAAAATGGAAACGTGAAGGAGCAgaacagaaatcaaaataatgaccacttttcagtgcagttttcatcactgtattttgtaactgCTATGAATCTGACCCATTCTGGAAAATAACTTCCTCCAAGCTTGTTGTTTAAGGTTCATTTTAAAGTCTGAAATTCTTTCACAATTCCCATTAtgccaatcttttttttttttttttactttttaaacagtAATTGCTATGTACATATGATAAATTAAGTTGGCAGACACCTTCATCTAAGGTGACGATTCAGATCAAAGTTTTCTCTTCAGATCTCTTGTATCTTGTGTAAGGAGAGCAATTATCTTTAACAATTAGATCATTAAGCCACAATTAGAGCCCCTCATTATGACTAAAGCACATCGCCTTGCAACAGGAATTGCCTGTGCAAACACAATTACTTACACTTAATGAAATCACAAAGCGCACAAGAGTTGGATGAAGACTGCtgttaaatcatttatttatacttttacaCAACAGTGGATCTATAGGGGCTGCAAGGGACAGTGATGTATACTCAATGTGATGTGAACCTAATGTATTGGGATACctgccaaaataacaaaattattgtGTACAAGGTATTCAACAAATGAACAGGTTGCACATTGCTAGAatggaacacatttttcacagatCGAGGTGAATGTATCATGGGAGAGTTAtgtaatgtctttttttttatcatttgatGGACCATTTGAGGAATGTGTAGTGTCTGTGAAAACAGGACTACTCAAATAACATTTGGAATTTAACTCCTTTAAGTCACTGCACTGTAAAATGTAGCATTGTATTTTAACCGGAAAAGGAGCCATGTAGTCATGTGTTGAATCAAGTTTTACTGTTTTCTATGCAGATAATTTGCGTGTTTGATATTGGCTGCCGaagtttaaacaaacattttttctaACCTCATATTTCTATTGGTGATGTCAAATGCCAGTTGTGTTTCAAACACCTCATTCTGAAGTTTTCTGGAATTTTATTTTGAGGAACGGGACTGCTGTGTCATGACTGCTTCATTCTCAAAGGAAAAGGGAATAAAGTTTTGGACACCTGATTTCTTGTTCGAAAGCATTATGaataaaatctgaataatttacagattctttaaatatctacatttttttaacttaaagtGTAAAAGTGTCAGACAAGTTCTCAATGCACCAGCTTTACGTATtacttttgttaaaaataaatattataacaatccaa

Function

GO: NA

KEGG:

id description
K14395 ACP6; lysophosphatidic acid phosphatase type 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014813 True 2950 mRNA 0.40 9 32270685 32285936

Neighbor

gene id symbol gene type direction distance location
AMCG00014809 NA coding downstream 301462 31967444 ~ 31969223 (-)
AMCG00014806 NA coding downstream 480948 31769573 ~ 31789737 (-)
AMCG00014797 NA coding downstream 563163 31700627 ~ 31707522 (-)
AMCG00014795 LOC107746280 coding downstream 650308 31594391 ~ 31620377 (-)
AMCG00014794 NA coding downstream 692097 31528997 ~ 31578588 (-)
AMCG00014814 NA coding upstream 36038 32321974 ~ 32322759 (-)
AMCG00014820 NA coding upstream 342896 32628832 ~ 32641932 (-)
AMCG00014819 NA coding upstream 361598 32647534 ~ 32648995 (-)
AMCG00014818 NA coding upstream 364240 32650176 ~ 32653420 (-)
AMCG00014823 slc10a2 coding upstream 505945 32791881 ~ 32793425 (-)
G73049 NA non-coding downstream 5261 32265132 ~ 32265424 (-)
G73046 NA non-coding downstream 13910 32256155 ~ 32256775 (-)
G73005 NA non-coding downstream 371740 31896940 ~ 31898945 (-)
G72919 NA non-coding downstream 572673 31697655 ~ 31698012 (-)
G72874 NA non-coding downstream 750753 31515430 ~ 31519932 (-)
G73066 NA non-coding upstream 71766 32357702 ~ 32362393 (-)
G73082 NA non-coding upstream 144661 32430597 ~ 32430951 (-)
G73106 NA non-coding upstream 164486 32450422 ~ 32466416 (-)
G73112 NA non-coding upstream 237302 32523238 ~ 32523802 (-)
G73117 NA non-coding upstream 283735 32569671 ~ 32574686 (-)
G73047 NA other downstream 7258 32263167 ~ 32263427 (-)
AMCG00014775 NA other downstream 1423885 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 2872380 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 3938203 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 4901158 27335695 ~ 27369527 (-)
AMCG00014816 NA other upstream 169370 32455306 ~ 32555945 (-)
G73127 NA other upstream 311526 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 509069 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 784313 33070249 ~ 33119328 (-)
G73328 LOC101154678 other upstream 2483647 34769583 ~ 34769979 (-)

Expression


Co-expression Network