AMCG00014816


Basic Information

Item Value
gene id AMCG00014816
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32455306 ~ 32555945 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014816
ATGGCAAAAGGCTACATTGGAGCGGAGAGCATACAGGTGTCTCTCAATGACCAGCTTCTGAATGAGTCCAGAATGAAAACCATTCTGCTGTTCCTTATGTCCCTAGATTTCTCAGtgtatcACCTTAAAATCAATCCAGTAACCTCAGTCACCAAAGGCCTAAAATTCATCAGCAACACCAGCTTTGTAGTTACAGTTGGTGAGGATGCTTATTTGGGCTGCACCACTGAGAACCCCTCACAAGCCTTGTCTCAGATAAGCTGGCAGAGACCAGAGGGTGTGAACTTTTATGTCTTTACGCCTGAGAATGGAGCTGAAGCTGTGAATGAATTTGGGAAAAGAGTGAAATTCAACAGGATAGGCAATTGGGATGGTTCCATTGTCATACAGAATGCTTGTCTCTCTGATGAAGGCGTTTACATTTGCATCTTTACCATCTTCCCCAGTGGACCATTTCACTTTTCAGTGACACTCACTGTACAGGTGAAGCCTGTGCTCACGGTGTCCACAGAAGGTCTTACTGAAGAAAGCCATAGAGAAACACATATTGCGACCTGCAGAGTGGAGCATGGCAAACCAGAGGCCACAATCACTTGGGAAACTCCTTTTCCTAAACACAAGTCTGTGGAAACCTCATTAATGAATGAAGACTGTACAATTACCATAGAGAGCCAACTGAGAGCCATCCCAACCCGCTCAGAACATGGCCAGGAGGTGCATTGCATTGTGGAGCACCCAACATTCCAAAAGCCGGAAGTGGCTTCTGCCAGGCTAAATATACAGTaTCCTCCTAATTTGACAGTAAAACAGTTGAATCCAGATGCACTGATCTTCCAGTGTGAAGCAGACGCTAACCCACCGGTGGAAGAATATGTTTGGACACGTTCTCCACAAAGTCGTCTGATGTCAATGGGATGTACCACTGTGAAGCGAAAACCCATAACACCTCTGCAAGAGCACAACTTTACCTTCAAAtctGTGATAAATAGAGGGGTGGTGTAG
>TU91353
CCATCACTAGTAAATGAACTCCACTCCCTGAAACACACCTGAAGAGATTGCACCGTATTGCcacaacatatatttaaagcatGGTTCGTGTACGGGACAGGTGTCTCTCAATGACCAGCTTCTGAATGAGTCCAGAATGAAAACCATTCTGCTGTTCCTTATGTCCCTAGATTTCTCAGtgtatcACCTTAAAATCAATCCAGTAACCTCAGTCACCAAAGCTGTTTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014816 True 1002 mRNA 0.45 8 32502317 32555533
TU91353 False 231 lncRNA 0.42 4 32455306 32555945

Neighbor

gene id symbol gene type direction distance location
AMCG00014814 NA coding downstream 132547 32321974 ~ 32322759 (-)
AMCG00014813 NA coding downstream 169370 32270685 ~ 32285936 (-)
AMCG00014809 NA coding downstream 486083 31967444 ~ 31969223 (-)
AMCG00014806 NA coding downstream 665569 31769573 ~ 31789737 (-)
AMCG00014797 NA coding downstream 747784 31700627 ~ 31707522 (-)
AMCG00014820 NA coding upstream 72887 32628832 ~ 32641932 (-)
AMCG00014819 NA coding upstream 91589 32647534 ~ 32648995 (-)
AMCG00014818 NA coding upstream 94231 32650176 ~ 32653420 (-)
AMCG00014823 slc10a2 coding upstream 235936 32791881 ~ 32793425 (-)
AMCG00014826 NA coding upstream 571733 33127678 ~ 33434382 (-)
G73082 NA non-coding downstream 24355 32430597 ~ 32430951 (-)
G73066 NA non-coding downstream 92913 32357702 ~ 32362393 (-)
G73049 NA non-coding downstream 189882 32265132 ~ 32265424 (-)
G73046 NA non-coding downstream 198531 32256155 ~ 32256775 (-)
G73005 NA non-coding downstream 556361 31896940 ~ 31898945 (-)
G73117 NA non-coding upstream 13726 32569671 ~ 32574686 (-)
G73132 NA non-coding upstream 72584 32628529 ~ 32630521 (-)
G73181 NA non-coding upstream 152068 32708013 ~ 32708283 (-)
G73182 NA non-coding upstream 153899 32709844 ~ 32710115 (-)
G73183 NA non-coding upstream 154852 32710797 ~ 32711045 (-)
G73047 NA other downstream 191879 32263167 ~ 32263427 (-)
AMCG00014775 NA other downstream 1608506 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 3057001 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 4122824 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 5085779 27335695 ~ 27369527 (-)
G73127 NA other upstream 41517 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 239060 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 514304 33070249 ~ 33119328 (-)
G73328 LOC101154678 other upstream 2213638 34769583 ~ 34769979 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other upstream 3024681 35580626 ~ 35608677 (-)

Expression


Co-expression Network