AMCG00014831


Basic Information

Item Value
gene id AMCG00014831
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34691085 ~ 34931860 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014831
ATGAAGCACTATCTCCGAGAGCACCATCCCACAGAATTTGTGGACATGAATGTGTTTACAGAATTTAAAAGAATCACTGCCATTGACCTCAAATCCACTTTTATGTCATCGCTTGATCATCATACCAATACCCTTATCCGGATGTTCCGTGCCAAGGGTGGAGACCTTGGAGACAAGATGAAGTGCCTTATTGATAAACTTGATGAGCAGGCACAAGTCCAGGGACTCCGGGGTTGCCAACTGAGGGGGCCcggctcttcctcctcccctgCCCCCTGCAAACCCGCAAGTTCCTCTTTACCTCCGGGTCCAGCTGAGGGGCTGGCCCTGGTATGGGCGCAGATGAACGATCAGCAGCTCATAATGCGCTTCGTCCTAGCGTCCTGGTTAACAATAACGACATCCCCCAGTGATCCAGTAAACGAAGGCATGCCACTTGGGCCCCAGCTTCGACTGGAGCTCTATCATGAAGCTTTGCTGTGCCTGTTGCCCCCGATCGAAGAGAGATCGAAGCACCAGGAACTCCCTGTGCCTTCCAAGTGGGATCGCCCCATTCAGAACCCAACCCTACCAGGCCCCAGCACCAACCCTGCCCTGCCAGGCCCCTGCACCAACCTGCCAGGCCCCAGCACCATTCCAGCCCTGCCTAGCACGAGCTCAGACACAGACCTGCCCAGTTCTTATGCTAGCACCAGCTCACCCTTGCCCAGCAATACCATTGCTGACAGTGGACTACCAACTCCAGAGGACATCCGGCCATATCCAAAAGCTGgcttatttttaaagcaaagccTTTATGGAAGAGTaatcTATTTCAACCCTTTAGTGACCTGGGTTACACCTTACCCATACCTTAAGACTGAGatCAGGAGCACCACCagcatgatgatgatgatgatgaagatgacaCAGCCTGAAGCGATCCCCGCAAACAGCGCCACCTCTGAGCCGATGATGCTTGACGACTGTCCCCCCTCATCATTACCATTTTGGCAAAGAGCCAAGCTTTTGACCTATGACATCAATCTAAGCAACAATACCCAATTTTACCCTGAGCTGGTTCTCAAAACAATGACTGCCCTGTCGTCTTTAGTATTTCATCACGACACAATGCTAGGAATGCGTTTGTGGGAGCACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014831 True 1140 mRNA 0.52 12 34691085 34931860

Neighbor

gene id symbol gene type direction distance location
AMCG00014827 NA coding upstream 912837 33697523 ~ 33778248 (+)
AMCG00014822 NA coding upstream 1922106 32758965 ~ 32768979 (+)
AMCG00014821 LOC107738524 coding upstream 1934948 32734868 ~ 32756137 (+)
AMCG00014817 taf6 coding upstream 2027931 32653743 ~ 32663154 (+)
AMCG00014815 gja8,LOC107746070,LOC107566528,LOC107566539,LOC107603011,LOC107746288,LOC107676899 coding upstream 2293577 32396687 ~ 32397508 (+)
AMCG00014833 NA coding downstream 95997 35027857 ~ 35320982 (+)
AMCG00014835 NA coding downstream 439124 35370984 ~ 35382903 (+)
AMCG00014834 NA coding downstream 532141 35464001 ~ 35474369 (+)
AMCG00014837 NA coding downstream 619297 35551157 ~ 35551807 (+)
AMCG00014848 tmprss3,LOC107748899 coding downstream 1363856 36295716 ~ 36297723 (+)
G73321 NA non-coding upstream 80673 34610180 ~ 34610412 (+)
G73304 NA non-coding upstream 240701 34450155 ~ 34450384 (+)
G73297 NA non-coding upstream 328137 34362707 ~ 34362948 (+)
G73295 NA non-coding upstream 397542 34293337 ~ 34293543 (+)
G73285 NA non-coding upstream 575381 34115346 ~ 34115704 (+)
G73354 NA non-coding downstream 146799 35078659 ~ 35078896 (+)
G73356 NA non-coding downstream 237089 35168949 ~ 35169206 (+)
G73374 NA non-coding downstream 322009 35253869 ~ 35256115 (+)
G73380 NA non-coding downstream 335784 35267644 ~ 35268081 (+)
G73427 NA non-coding downstream 540200 35472060 ~ 35476459 (+)
G73292 LOC100846954 other upstream 451685 34238934 ~ 34239400 (+)
G73244 NA other upstream 1324985 33364755 ~ 33366100 (+)
G73103 NA other upstream 2129596 32542510 ~ 32561489 (+)
AMCG00014811 NA other upstream 2728114 31939553 ~ 31962971 (+)
AMCG00014799 NA other upstream 2892622 31790901 ~ 31798463 (+)
G73343 NA other downstream 10151 34942011 ~ 34960447 (+)
AMCG00014836 NA other downstream 458774 35390634 ~ 35412587 (+)
G73850 NA other downstream 2586248 37518108 ~ 37518406 (+)
G74114 NA other downstream 3500514 38432374 ~ 38432861 (+)
G74227 NA other downstream 3878833 38810693 ~ 38811128 (+)

Expression


Co-expression Network