AMCG00014833


Basic Information

Item Value
gene id AMCG00014833
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35027857 ~ 35320982 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014833
ATGGCTGACTGCAGAAGGGTGGGAGGTCCTGTGGATCCCCGGGGCTCCCTGTTCCAGAACCCAGGGATCTTCGTGCGTTTTagtggggtcaggggtcaggccAAGGAGACGCAAGGATTGGAGGGAGGAAATCACCTAGCCAAACAGTCCTGGTCTACAGGTCAGGGGCGCAGGGAGTACAACAGGGAGGAAAGGAGGGAGATGGAAATAaggaacctgaacctgaacctgaacctgaacctgaacctgaacctgaacggGCCAAAGACCAAGAGCCTTCCTTCttcctatttgttttgtttcttttgtttcctaaCCCGGTTCAGCGAGGTCGCTTCCCATGTCTTTTCTGCAACAGCGAAGGCATCGGGGCGTAGCAGAGAGATGGTGGAGCCGGAGTCAACGAGGCCCCGACATATTTGTCCCTCTATGGTGCAGTTAATGTCCTGTGTTTTGTCGGCCTGCTCCACAGCGCAAGCCATCTCCTCGTCATCGCCCAACTCGTCTGTTGCCTCGGTGTGGCAACACGGAAGGGCTTGCTTGTCTGGTGGAGCCAAGCACTCCTTCTGCATGGGTCACCAGCTGCAAGGCTTGCTTCAGTGTGGAGGGCCTGTCGAGCTCTGCCATCTAGTGCCATGGCTAGCTGTCCAGCCTTCTCTTCTGGGGTCCACTGTCCAGCCCATGCTGCCAGCTGGAATTGGGCCTGCTGCAGCCAAACACCCCAACAGCACTCTCCTGTATGACGGCAGCAACAGCATCCGAAACTGCAGCTGTGCCTCAGAGATCCAGGCCTGCAACTATGCTCTAGCCAACATCTTGTGCAGCTGCAGGACCATCCCCCAGTCCACCATCATCACAGGGAACATCGGGCTCACCTACCAGGGAGGTCTAACTGTTTGGGTAGCCAATCCCTGGGTGCTGAACGTCCTGGTCAATCAGAGCTCAGTGCAGGACCTCCGGTTGGCTGCCTGTGGGAGCAGCCAACTCTCTGCAGAATACCTCATTGTTTTTGGGCTGAAAAGGTTGCGGATTTTCAACAGTGCTGTTGGGGCTCATTTCCCCGAGCAGGTCCTAAGCATCGATGCAGTGGAGAAAAGCAGAGGGAAATCCAGGGCCCAGCTAAGTCAGAAGCTCAGCTTGCCCTTCCAGGTGTCCTTCTTGGATGTGGCTTTACTCAATGCCCCTCATATTCTGGTTTCACTTTCCATTGCTCTGATAGTTGTGTTTAAACCCTCCCTCAACTTCCTGAACTTTACACCAGAAGACTGCAGACAGTATATAGAATCTGTTACTTTCATCCAGAAACCTGGAGGATGGCAGAAAGAGGATGGTCTGGGCACTTGGAATTCCAGTGACATTGAGGATGCAGATGAAGAGGGAAAGGATGGCTATGAACACCTAGGTCTGCGTATTTCTGCAGCAAGTGCATCCACCAAACCCTATATTTCTTCAGGTTCAGCCCCATGTGTCACAACTGATGAGTCTGGACAAGCCACTAGTGTGGGAAAGCCAGTGCAGCAACTACACATGCTTATGTGTGTGAAGACTGCAGGGTCTTGGGTCCAGTCTGATACTGAGCCTCAGGAGTCGATACCTAAAAGGAAGGAGTCTAGCCTGGAATCTGATGACGTCAACCTGCTCTCCGTGAAAGTGGAGGGGCTACAGGCATTCTTGGGAAACCTTTCAGGTGGGGTGACCCTGGATCAAGACGAGCAGCATCCAGAGGAGGAGCTTCAAGAACAGGTGCTTTCCAAGTGCCCTGTGTCTGAGACTCTGGAGCCTGGAGACTGTGGCACAGAGCAGTCTAATACAGAGGCCATGGAGGGCCATGGTCAGACTGATTGCTCACaatcagaggaggaggaggaggaggaggaggaggaggaggaggaggaagcatATCATGGATATTTGACACGCAGGGTGTTTACTGGCATGATTGCTCTGCCTTGGTGGCACGGGCATCTCATTGAAGACGGTACTCCTGTTGCTATAGCCCGCCGGTTGCTCAGTGTCACTCTACAGGAAGTGCGGAGGGCGGTATCACTGGTCAAGGGAGAGGTGGTCCAAGGAAGGTACCAGGTTTATGCCACCTCCCAGCCCCTGTCAATCGGAAGTGCAGCTGGCCTGAACCAAAAAGCTCCACTGCGCCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014833 True 2157 mRNA 0.54 13 35027857 35320982

Neighbor

gene id symbol gene type direction distance location
AMCG00014831 NA coding upstream 95997 34691085 ~ 34931860 (+)
AMCG00014827 NA coding upstream 1249609 33697523 ~ 33778248 (+)
AMCG00014822 NA coding upstream 2258878 32758965 ~ 32768979 (+)
AMCG00014821 LOC107738524 coding upstream 2271720 32734868 ~ 32756137 (+)
AMCG00014817 taf6 coding upstream 2364703 32653743 ~ 32663154 (+)
AMCG00014835 NA coding downstream 50002 35370984 ~ 35382903 (+)
AMCG00014834 NA coding downstream 143019 35464001 ~ 35474369 (+)
AMCG00014837 NA coding downstream 230175 35551157 ~ 35551807 (+)
AMCG00014848 tmprss3,LOC107748899 coding downstream 974734 36295716 ~ 36297723 (+)
AMCG00014850 NA coding downstream 1296683 36617665 ~ 36733253 (+)
G73327 LOC101154678 non-coding upstream 257899 34769583 ~ 34769958 (+)
G73326 NA non-coding upstream 274086 34753537 ~ 34753771 (+)
G73321 NA non-coding upstream 417445 34610180 ~ 34610412 (+)
G73304 NA non-coding upstream 577473 34450155 ~ 34450384 (+)
G73297 NA non-coding upstream 664909 34362707 ~ 34362948 (+)
G73427 NA non-coding downstream 151078 35472060 ~ 35476459 (+)
G73431 NA non-coding downstream 176215 35497197 ~ 35502434 (+)
G73462 NA non-coding downstream 350796 35671778 ~ 35672050 (+)
G73463 NA non-coding downstream 353991 35674973 ~ 35684158 (+)
G73471 NA non-coding downstream 419553 35740535 ~ 35742847 (+)
G73343 NA other upstream 67410 34942011 ~ 34960447 (+)
G73329 NA other upstream 247267 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 788457 34238934 ~ 34239400 (+)
G73244 NA other upstream 1661757 33364755 ~ 33366100 (+)
G73103 NA other upstream 2466368 32542510 ~ 32561489 (+)
AMCG00014836 NA other downstream 69652 35390634 ~ 35412587 (+)
G73850 NA other downstream 2197126 37518108 ~ 37518406 (+)
G74114 NA other downstream 3111392 38432374 ~ 38432861 (+)
G74227 NA other downstream 3489711 38810693 ~ 38811128 (+)
G74348 NA other downstream 4015286 39336268 ~ 39475819 (+)

Expression


Co-expression Network