AMCG00014835


Basic Information

Item Value
gene id AMCG00014835
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35370984 ~ 35382903 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014835
gttttgtgcGTTTATATGGTTAATAACCTGTAGgttctttgtgtatttttgtctcagtgtactctttTCTGTACTGCAGGCCAATGTGAGCTCCCATCTCCTACTAATGTCACCATTATCTCCCTCAACCTGGAGCATGTCCTCAAATGGGATCCAGGTCCTGGTTCACCAACTGGAACACAATACAGAgttgaatatttacatttccaAGTTCAAGCTTTCACAGAGTTAGAACAGTCCACCTGGTCGAAGTCAAGCTTTTTCCAGCCTATTTCAAACACAATCCTGGGTCCTCCTGAAGTAACTGTGTCTGGCTGTGGCGATTGCCTTCATCTACAGGTGAAGCCCCCAAAGGGAAAGAGAATGGACCACTTCTTAGCCTACTACGAGTCTGAATACATTTGCGAAGTCCTGAGTGCCACAGATGGAAGAAAGTTCACCCTGAGAATTTCAGGACAAAGAGTTATTGAATATTTGAAACCTGCCACAGAGTACTGTGTCACTGTGAAAATGTACATAGGAATCAATCAGCATGCTATTCTTTCTAATCCACACTGTGTTTTCACCAGCTTACCTCATCTAAACAAAGtccCTGTTGTACTAGGCCTGTTTTGCTTGGTCTTCTTGCTGAGTGTTATGGTCTGGGGATTCCTGTTCTACGGTTACATTCTGCGCTCTCTTTAAAAACATCTCCCAAATTCTTTGATGTCTTTGTCTTTTGATGCAAGCACTCAACAGGTCAACACTCCAGAAATGGATTGCTCAGTCAATTTCCTTAAATTAGACATGGAAGGCAAAAGGTGTAACTGGTACCACTTGAACACCAGTGTCAAAGAGGAGAGTGTAAGAGAAGAAGATAAAGGCTATGGGCACATTACATGCAATGCTAGTCCggatacacacactgactttCAACAATAGTCTGAACCTGTCTGCCCCAAACTTGAGCTGGTCTGTGCGTGGGGTTTAAAAAACAGGAcctcaaacaaaatcaaaaggaaTAAAGAAGGTTCTGTAAAGGAAGATATTATTGATTTGTTActtgttcttcattttattttagtttctgccCTATACCAAGTGAGTGGTTATCCACTGTGCAATTCTAAATAATCAACTCTttggttatttttgtattgtttttcttttcttttattcactTTTTACCTTCCAATGTTGCACCCTGGCATCACTGACCTACAATGATCTTGTTTCATGATAACATGCCTCAAGTTCAGTTTTCTCTGAACATGAGAGTCTTGAAAAAATCCATGTATTTTTTGTCTGaacttttttcttctgtccttcaaatataaaaaagctaaCTTTGTAACTAAAACAATTTAAGTAATGATAGATTCATGACCTAGTTCAGTCCAGTTCAAAAGCATGGTAAATGCTTTTACGTGGTAAattttacaaatgcattgttgaaaatgacatttattgCATCTTGATATACAACATGGTTGTTGAATCAATCTGTCAgcattatataaacacatttaatttagtttaaacaATGTGTTTCACGTGAATGTGATTTATGTTCCAAAATGGTTGAGGACATCCTTGGTTAACATTGTCATTGACAGCAAAGGGTATTCAAATGGGATTATATAGACCCACTTACCAAATAGTTCATAGATCATTATTGCCTCTCACCATGGCACTGAACAATCGCTTACTTAATAGGTTAATTGGGCTAAAGATGAGCACAGTTAAGAGAATGTGGACATAACAGAAGACTGACTGTTAGATCAGTCTTGCGAATATAAAATCAGTTTATATTACTGTGATATTGAGCTGAATCGAATTCAGattatgctttttgtttgttaaattctCTGCAAAACGGTGATACAACAAAATGCAATACTCTTAACTGCTCAGTGttgtgatgtttttatataatttatataaaatactgaaatcataacATCAATGCTGTATTATATAAcgaagatataataataataataataa

Function

GO: NA

KEGG:

id description
ko04622 RIG-I-like receptor signaling pathway
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014835 True 1986 mRNA 0.37 6 35370984 35382903

Neighbor

gene id symbol gene type direction distance location
AMCG00014833 NA coding upstream 50002 35027857 ~ 35320982 (+)
AMCG00014831 NA coding upstream 439124 34691085 ~ 34931860 (+)
AMCG00014827 NA coding upstream 1592736 33697523 ~ 33778248 (+)
AMCG00014822 NA coding upstream 2602005 32758965 ~ 32768979 (+)
AMCG00014821 LOC107738524 coding upstream 2614847 32734868 ~ 32756137 (+)
AMCG00014834 NA coding downstream 81098 35464001 ~ 35474369 (+)
AMCG00014837 NA coding downstream 168254 35551157 ~ 35551807 (+)
AMCG00014848 tmprss3,LOC107748899 coding downstream 912813 36295716 ~ 36297723 (+)
AMCG00014850 NA coding downstream 1234762 36617665 ~ 36733253 (+)
AMCG00014852 NA coding downstream 1530497 36913400 ~ 36914503 (+)
G73380 NA non-coding upstream 102903 35267644 ~ 35268081 (+)
G73374 NA non-coding upstream 114869 35253869 ~ 35256115 (+)
G73356 NA non-coding upstream 201778 35168949 ~ 35169206 (+)
G73354 NA non-coding upstream 292088 35078659 ~ 35078896 (+)
G73327 LOC101154678 non-coding upstream 601026 34769583 ~ 34769958 (+)
G73427 NA non-coding downstream 89157 35472060 ~ 35476459 (+)
G73431 NA non-coding downstream 114294 35497197 ~ 35502434 (+)
G73462 NA non-coding downstream 288875 35671778 ~ 35672050 (+)
G73463 NA non-coding downstream 292070 35674973 ~ 35684158 (+)
G73471 NA non-coding downstream 357632 35740535 ~ 35742847 (+)
G73343 NA other upstream 410537 34942011 ~ 34960447 (+)
G73329 NA other upstream 590394 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 1131584 34238934 ~ 34239400 (+)
G73244 NA other upstream 2004884 33364755 ~ 33366100 (+)
G73103 NA other upstream 2809495 32542510 ~ 32561489 (+)
AMCG00014836 NA other downstream 7731 35390634 ~ 35412587 (+)
G73850 NA other downstream 2135205 37518108 ~ 37518406 (+)
G74114 NA other downstream 3049471 38432374 ~ 38432861 (+)
G74227 NA other downstream 3427790 38810693 ~ 38811128 (+)
G74348 NA other downstream 3953365 39336268 ~ 39475819 (+)

Expression


Co-expression Network