AMCG00014852


Basic Information

Item Value
gene id AMCG00014852
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36913400 ~ 36914503 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014852
ATGTATTGCTCTACAAGTTCATGCTGCTCCAATGTCAAGCTAGCTACATTTGATGGCAAGGAAGAATGGGATTTATTCCTAATCCCATTTAAGCGGGCAGCACGAAGACATGCCTGGACTGGTGCAGAAAGGGTTGACAGACTTCATGAACGTCTAAGAGGATCTGCTGTTAGGTACGTGTGCTCACTCCCAGAGCATGTCAGGGAGGACTACTCTCTCCTAGTTGAGCAGTTCATACAGAGGTTTGGTCAAACAGACCCCCCAACCACAGTCCGCAGGCGACTTGGTGAGCTCTGCCAAAACAAGGAGTCATCGCCCGTGTTTGCAGAGGAGGTGCGCTGCTTAGTCACCTTAGCCTATCCAGGAGTGGATCTTGAATTTCAGGATCAAATGGCGGCTGTCATTTTCCTCAAGGGCCTTAGAAGTCAGAGGGTGGCATATGAGCTGATGAACAAAGACCCACTGACACTGGTGGAGGCACAAAAGCTTGTGGAGGCCCATGAGCACAATTATAGAGCAACACTTGGCCGGGACCCTGATTTAAAAGGAAGGGCACGACGCATTTCCTGGGCTGATGACAAAGCTGATGTGGAGAAAGCCAAGGAAGCCGCCCCAACAACACTATCCATGAGGGAGGCAAGGGAAAAGATGCAGTACGGCAGCCACCCAGCCCTGCAAGGACCACCACATTCCCCAAATGCCCCAAGTACTTTTCAGAGAGCCATGCAGCTGGTCCTGCAAGGATTACAATGGCAGACACTACTGATCTACCTGGATGACATCATCATTCTGGGAACTGGAGTAGAGCAGAGCTTCAAACATCTGGCCATGGTCTTCCAGCAACTCAAGCAGTATGGGCTTAAGCTCAAATCTTCAAAGTGCCAACTGCTGAAGGATGAGGTTCTTTTTCTGGGACACGTAGTTAATGCGCAGGGCATAAAGACAAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014852 True 951 mRNA 0.50 2 36913400 36914503

Neighbor

gene id symbol gene type direction distance location
AMCG00014850 NA coding upstream 180147 36617665 ~ 36733253 (+)
AMCG00014848 tmprss3,LOC107748899 coding upstream 615677 36295716 ~ 36297723 (+)
AMCG00014837 NA coding upstream 1361593 35551157 ~ 35551807 (+)
AMCG00014834 NA coding upstream 1439031 35464001 ~ 35474369 (+)
AMCG00014835 NA coding upstream 1530497 35370984 ~ 35382903 (+)
AMCG00014853 cyh2,cyth4,LOC107558519,LOC107555099 coding downstream 86127 37000630 ~ 37030062 (+)
AMCG00014862 NA coding downstream 782157 37696660 ~ 37706352 (+)
AMCG00014864 NA coding downstream 839292 37753795 ~ 37754523 (+)
AMCG00014863 NA coding downstream 840356 37754859 ~ 37755848 (+)
AMCG00014870 NA coding downstream 987294 37901797 ~ 37904976 (+)
G73739 NA non-coding upstream 140659 36772485 ~ 36772741 (+)
G73689 NA non-coding upstream 224335 36654955 ~ 36689065 (+)
G73641 NA non-coding upstream 413270 36490183 ~ 36500130 (+)
G73638 NA non-coding upstream 435450 36476608 ~ 36477950 (+)
G73619 LOC107575789 non-coding upstream 564344 36304584 ~ 36349056 (+)
G73791 NA non-coding downstream 246485 37160988 ~ 37163326 (+)
G73802 NA non-coding downstream 258428 37172931 ~ 37173176 (+)
G73806 NA non-coding downstream 328732 37243235 ~ 37243446 (+)
G73828 NA non-coding downstream 383174 37297677 ~ 37298128 (+)
G73829 NA non-coding downstream 384882 37299385 ~ 37299598 (+)
AMCG00014836 NA other upstream 1500813 35390634 ~ 35412587 (+)
G73343 NA other upstream 1952953 34942011 ~ 34960447 (+)
G73329 NA other upstream 2132810 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 2674000 34238934 ~ 34239400 (+)
G73244 NA other upstream 3547300 33364755 ~ 33366100 (+)
G73850 NA other downstream 603605 37518108 ~ 37518406 (+)
G74114 NA other downstream 1517871 38432374 ~ 38432861 (+)
G74227 NA other downstream 1896190 38810693 ~ 38811128 (+)
G74348 NA other downstream 2421765 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 2669535 39584038 ~ 39588507 (+)

Expression


Co-expression Network