AMCG00014860


Basic Information

Item Value
gene id AMCG00014860
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37602472 ~ 37616362 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014860
CCTCTCAGGATCTTCAAGAAGAAGGCTGGCACccggcgaccgcccagcagctCCTCCCACTGCCCAGCCCACCAGAACGCTTATAGCGAATCCCTGGGCAGCTATGCCAGCGAGGAGCCAATCAAGGCTGAGGAGTACTGGGgtATTGCCCCCTCCGTGAGAGAACTCCACCGCAGTAGCAGGGGGGGCTCCCGCAGTAAGCTGCCCCCCCCCAGTGCAGACGGGCAGGGCCACTCTTCCGGCTACTCCTCCTCTGAGGAGGGCGGCTCTGGTTCTTCCCAAGTCTTGCAAGTCCAGCCTGGACTGGGATTCTGGGATCTCCTCCTGTCTCCAGgcaaGGCAGTGGCGATGCTGTTCTGGTGGCTGGGCACGGCCTGGTATAGCCTGACCACTGGGGCCTCCATGCTGGATGTGTTTCTGCTTAGCAGgcacACAGGCACAGTGAAGAAAGCCATTGAGCTGCTCCTACTCCTGCTCCTCTTGGCGtttgGTATTTGGTACTGGTACCCATTCCTGACTCTTTCTTCGGGGGGTGCAAGTACTGTGGCTCCCTTGCACAGCTCTCAGGGTAGCCCTGGCATCAGACAGGACAGTTCAGTTATTTCGCGTCTGTCAGCCCTGGAGAAGGACATGGGGAGGAtgctgggagagagagcgagggagggcgagagagagaaaatgagggagggaggtggaggCCTGACCCCAGAGATGACATCCTCACTCATCCACATGGTGCTGTCTGAGAGAGAGGCGAgctggagagaagagagagagacattgcaGAGGCAGATCACGCAGCTAAAACAGGATGGAGAGACTAAGTGGCAAGAAACTCAAGACAAACTACAGCTGGCTTCTAAGAGACTTCTGGCTGAAGTGTCTGAGTTGAAATCCACTGTGACAGGCCTGCAGACGATGGATGACAGCAACACACTGGAGCGGCTGACCGGCCTGGAGCAGCAGCTTAGGATCCTCCACAGTGACTTCAACACCCTGAACACAGACCACCACTCCCTGAGAGAGCAACTCCACACACTGGACACCTCACACTCGCAGgtgcgCTCCGAGCTGGCTGAGTGGCTGGCGCAGTACCTCTCCAGCCCCCCAAAGGGCGCTGTGCCAGTGGTGCTGCGGCCCGAGATGCAGGAGGCGCTGAGGGGGCTGGAGCGGCAGgaggtACACAGAGTGGTGCAGAGGGCGCTGGCTTTGTACAGGGCTGATGGGATTGGGCTGGCGGACTACGCACTGGAGTCTTCAGGTGCCAGTGTGATCAACACACGCTGCTCTGAGACTTATGAGACCAAGACGGCCCTGCTCACTCTGTTTGGCATCCCCATGTGGTACCACTCCCAGAGCCCCCGGGCGGTGATCcagCCGGATGTCCACCCTGGTAGTTGTTGGGCTTTCCGTGGTTCCCATGGTTTTGTGGTGGTGCAGCTATCCAGCCCAGTGCGGCCCCGCGCTGTGACTCTGGAGCACATCCCCCGCACCCTGTCCCCCTCTGGCCGCATTGACAGCGCCCCCCGCCACTTCGCCGTATATgGAATGACCAGTGAGAAGCAGGAGGAGGGGACCCTGCTGGGGCAATTCACTTACGACCAGGATGGAGAGCCCATACAGACCTTCACTCTGCCggactCACTGCAGGAGGTGTACCCCCTGGTGGAGCTCAGGGTGCTCAGTAACTGGGGCCACCCAGAGTACACCTGCGTCTATCGCTTCCGGGTTCATGGCGAGGGGCCCCACCTCTGAGCACCAGCCAGGGCACTGACGGGGAGGGACGTGGCAAAAAGAAGATCAGGATGAATAACAAGgatggagggtggggggggagtagAAGGAATGGTTGAAGAACAAGGGGGGAGG

Function

GO: NA

KEGG:

id description
K19347 SUN1_2; SUN domain-containing protein 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014860 True 1869 mRNA 0.60 16 37602472 37616362

Neighbor

gene id symbol gene type direction distance location
AMCG00014861 NA coding downstream 44263 37554889 ~ 37558209 (-)
AMCG00014859 NA coding downstream 181305 37417533 ~ 37421167 (-)
AMCG00014857 LOC108412080,LOC108430011 coding downstream 242763 37323742 ~ 37359709 (-)
AMCG00014858 NA coding downstream 292655 37302224 ~ 37309817 (-)
AMCG00014854 NA coding downstream 486806 37080157 ~ 37115666 (-)
AMCG00014866 NA coding upstream 255044 37871406 ~ 37887963 (-)
AMCG00014871 NA coding upstream 328785 37945147 ~ 37954312 (-)
AMCG00014875 dnal4,dnal4b,LOC108261343,LOC106591471,LOC108436609,LOC108412416 coding upstream 421001 38037363 ~ 38040051 (-)
AMCG00014874 NA coding upstream 431124 38047486 ~ 38052112 (-)
AMCG00014878 NA coding upstream 509681 38126043 ~ 38128745 (-)
G73866 NA non-coding downstream 20310 37581766 ~ 37582162 (-)
G73857 NA non-coding downstream 28332 37573738 ~ 37574140 (-)
G73853 NA non-coding downstream 70496 37531470 ~ 37531976 (-)
G73851 NA non-coding downstream 84141 37518043 ~ 37518331 (-)
G73803 NA non-coding downstream 429301 37172930 ~ 37173171 (-)
G73908 NA non-coding upstream 66877 37683239 ~ 37683542 (-)
G73911 NA non-coding upstream 87484 37703846 ~ 37704048 (-)
G73918 NA non-coding upstream 210117 37826479 ~ 37826702 (-)
G73980 NA non-coding upstream 446985 38063347 ~ 38071617 (-)
G74030 LOC106607450,LOC105029658,LOC103393291,LOC102224681,LOC103147375,LOC101072687 non-coding upstream 561612 38177974 ~ 38180598 (-)
G73833 NA other downstream 277165 37325020 ~ 37325307 (-)
AMCG00014845 NA other downstream 1208979 36373151 ~ 36393493 (-)
G73612 NA other downstream 1348285 36253774 ~ 36254187 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other downstream 1420121 36101358 ~ 36182351 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other downstream 1993795 35580626 ~ 35608677 (-)
G73916 NA other upstream 162971 37779333 ~ 37783575 (-)
AMCG00014865 NA other upstream 185732 37802094 ~ 37864483 (-)
G74087 NA other upstream 726960 38343322 ~ 38350291 (-)
G74107 NA other upstream 795798 38412160 ~ 38413231 (-)
G74115 NA other upstream 815901 38432263 ~ 38432875 (-)

Expression


Co-expression Network