AMCG00014862


Basic Information

Item Value
gene id AMCG00014862
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37696660 ~ 37706352 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014862
atgacttcTCCAGCAAAGACATACTACGGAACATTGAACATCATCGTCGAAGATACCGGGGAAGCTATTTTATCCATTGAAAAAAGCATCACAACCGAGTGCGAACAGTTTGCGGATAAATCCTGGGAGACTGCTGCGGACCCGACCCCGATCCACTACTCTCACGACTCCTCCTGCTCCGTCCTGTGGCGCCCCTCTGACCGCCGCTGTCCCCCGGGCGCAGTGCTGAGCTCAGTGCGGCGGCTCTCTGATGCTCAGCCTACCGCCGGGGTCTGGAAGCTGCGCGGCACCATGCGCTCTTGGGCTCTGCTAGTGGCGGTGGCGGTGCGCCTGCTGCTCGTCAGCGCCGAGGAGGACACAGACAGCCTATCCAACAACTCTTTCAGCCGCCTGCCTCGGAGTCTAGactTAGAGCCCCAACCTGCAGTGCAGGCGCAGTGTAAGGTGCGGACGGAGGTGCTCTCTGTCACACGGGGCATGGTGGACCGCAGCCACGCCCATTTCCTGGTGTGGCCACCTTGTGTGGAGGTACAACGCTGCTCCGGCTGCTGCACCTCCCGGTCCCAGCAGCGCACACGCTACAATAAGgccgtggtggtggtggaggacCACACGGCCTGTCGATGCGAGCCCATCACTTCCCTCACCGCCCACCCCAGGGTCCCCCCACGGGAGCCCCCGAAAGAGACCCCTGGGGACCCCTACTCTCAAcaacagcacagacagacacaggaggaagaggagcagaaacaaaaacagcaactgaAACAGCAGGAGGAGAAATGTAAACAGCAACACGAGGAGGAGCACAACTGCAAACAGCAACTGCAACAGCAACACAACCTGAAGCTACACAACCAACAGCAACAAGGGCGGATTCACCCAGCGCAGTCGACACAAGAGAAACAGCAACTTCATGTACAGCAACAAGCACAGTTAGCAGAAGAGCAACAGCAACATAATATGCAACATCAGCAACAGCACCACAACCAGAGTCACCacccacagcacacagagacacagcaacAGCACCACAACAACCAGAGTCACCACCcacaacacacagagacacagcaacAGCACCACAACCAGACCCACCacccacagcacacagagacacagcaacATCACCACAACCAGAGCCACCACCCAcagaacacagagacacagcaacAGCACCACAACCAGACTCACCacccacagcacacagagacacagcaaaAGCACCACAACCAGAGCCACCACCCACAGAACACAGAGCAACAGCAAtatcacacagagacacagcaacAGTCATACAACCAAAGCCACCACCTACAGCAATAtcacacagagaaacaacaacataatcTGGAACATCAGCAACAGCACCACAACCAGAGCCGCCATGCagagcacacagagacacagcaacATCAAACAGAGACATTGCAACAGCGACACAACCAGAGTCACCacccacagcacacagagaTGCAGCAACAGCACCACAACCAGAGTCACCacccacagcacacagagcaaCAGCACCACAACCAGAGTCACCacccacagcacacagagaaacagcaaCATAATctgcaacaacagcaacaaccacAGATCCACCAACCTACAACCCAAAAGCCAgtgACAGCTTCCCCCCTCGCCCGATCAACAGCGCCCCCcatgacccccccacccccccggcaACGCCTCCGACGCCCCAACAAGAAGAGGAAGCCCAGGAAATACAAACACAGCCTGAGCAAAGCTGCACTGAGAGCAATGCTGGGTCTTGCACGTACAGCACCACGTGGCACATTTGCACAGGGGTCTTTCAATCCCTACGGGCGTCCAGAGTTGCCTGAGACGTCTAAAATGGATGCCAACAAGGGAGAGACATATGACAATCGTAATATGactattgttaatattattattattattgttgttgttctgtacATATGTTTTTCTATCAGCAGTggc

Function

GO:

id name namespace
GO:0007599 hemostasis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014862 True 1968 mRNA 0.55 7 37696660 37706352

Neighbor

gene id symbol gene type direction distance location
AMCG00014853 cyh2,cyth4,LOC107558519,LOC107555099 coding upstream 666598 37000630 ~ 37030062 (+)
AMCG00014852 NA coding upstream 782157 36913400 ~ 36914503 (+)
AMCG00014850 NA coding upstream 963407 36617665 ~ 36733253 (+)
AMCG00014848 tmprss3,LOC107748899 coding upstream 1398937 36295716 ~ 36297723 (+)
AMCG00014837 NA coding upstream 2144853 35551157 ~ 35551807 (+)
AMCG00014864 NA coding downstream 47443 37753795 ~ 37754523 (+)
AMCG00014863 NA coding downstream 48507 37754859 ~ 37755848 (+)
AMCG00014870 NA coding downstream 195445 37901797 ~ 37904976 (+)
AMCG00014867 NA coding downstream 229239 37935591 ~ 37944752 (+)
AMCG00014869 NA coding downstream 248018 37954370 ~ 37956516 (+)
G73896 NA non-coding upstream 13118 37683315 ~ 37683542 (+)
G73895 NA non-coding upstream 15021 37681367 ~ 37681639 (+)
G73890 NA non-coding upstream 48780 37647603 ~ 37647880 (+)
G73872 NA non-coding upstream 94249 37598728 ~ 37602411 (+)
G73852 NA non-coding upstream 164447 37531616 ~ 37532213 (+)
G73888 NA non-coding downstream 148 37706500 ~ 37708190 (+)
G73889 NA non-coding downstream 1934 37708286 ~ 37708801 (+)
G73914 NA non-coding downstream 39631 37745983 ~ 37746187 (+)
G73917 NA non-coding downstream 114734 37821086 ~ 37821362 (+)
G73939 NA non-coding downstream 169909 37876261 ~ 37884688 (+)
G73850 NA other upstream 178254 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 2284073 35390634 ~ 35412587 (+)
G73343 NA other upstream 2736213 34942011 ~ 34960447 (+)
G73329 NA other upstream 2916070 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 3457260 34238934 ~ 34239400 (+)
G74114 NA other downstream 726022 38432374 ~ 38432861 (+)
G74227 NA other downstream 1104341 38810693 ~ 38811128 (+)
G74348 NA other downstream 1629916 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 1877686 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 1900535 39606887 ~ 39621186 (+)

Expression


Co-expression Network