AMCG00014865


Basic Information

Item Value
gene id AMCG00014865
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37802094 ~ 37864483 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014865
cctcctcccactCTGCTTCTATAGAGGAAGCGAGTGTTTTAGTTTGAATGCATTCTTTTCACTCAAGGACACGCACCGAGAGAGCGACACATATGtacgcagagacacacacacacagagaacaaCACACACTAAGAGCAATACAGATCgacaaaagacagacagaaacacacagaagtGACACATGCTGGCAAGATAGAAAGAGACACACTAACTCTCGCAAACTTTACTGGCCATACATCAACGATAACAGCACCGttactccacacacacacagattgtaTGTATGATCGAGAGGATGATGGCGTGACTAAGACAAATGcctcTCCACCGAAGCCCAGGGACACGCAGAAAGACACCTCCTACCCCTGCCATGGCTCATCTCTGGATCCTTTGTACTGCCAGCCTACTAACCCTTTCCCTGCCCATCCACTGCACCCCCCCCAGAGCTGGCACACAACCCACCCAGCAGATGTCACAGGCCATGCAGTCTCTTCGGTGCTACAATGACTACATCTCCCAGATTGAGTGCAGCTGGAATGAGACCCAAGAGGCCCACAGCCTGGCCCCTCTCACACTGCACCACTGGAACCAAATAAAGAACCGACAGTGTGTGCCCAGTGACCCTCCAGTAAACAGATCCCAGTCTGTGCTGGAATTTCGCTGTCGTTTTAACAACTCAGATTTGGCGATTGGGATCCTGGACTCCTTCCTGCTGCACCCCCTCCCGTTGCACCCACAATGGCCCAGCCTCCAAGCCCTCCTCTTGGGAGACAACGTAAGGCCACGACCGCCCAGGAACCTTGTGTACCAGATGACACAGGAGGGGGGCACTGTGCTGACCTGGGACAGTGTCTACCCCCTTGACCACTCCCTTCACAGCACACTGAACTACCAGCTGCAGTACAGGAgagccccccaggactggacggaggcTCTGGTCTCTAAATCACAGTTGGCACTGGGGGACCTGGTGCCAGGTGTCAATTACCAGGCCCGAGTCCGAGCACGGGTCAGAGAGGGCAGCTGGAGCGAGTGGAGCCCCCTGCTGGAGTGGAGGACTAAGGACATCAGTGACTGGGGTCCCTATAACCTGCACTGTGATTTTGATGGACTGGACGAAGTCACCTGTACCTGGGAGGTCAAGAGAGAGGTCACCAGCTCCATACTCTTTAACCTCACCTACCACACCAGCCCCACAGCACAGGAGCAGTCCTGCTGTCCAGAGGCAGTGAACTCCAACTCCCATGATCCCTTACTACTGTTCCGCTGTCAGTTCCCAGCAACCACCTCCTCTGAGCTGCAGGTGCACCTCAGACCCGCCGAACTACAGAAGGAATTTCTGCCAAACCAACACAtcaAGCCACCAGCTCCCCAGGCTGTGTCCATTGAGGACAAGGGTGATGGGCTGCTGCTGAGCTGGAAGCTGCCTGTCCTGAATTACGAAATGGTGCTGGACACCCAGGTGCGCTACTGGAGGGATGAGCAGCAAGAGGAGAAAGTGGAGACCATTGTAGTGAATCAAAGCACGTCCTCCATCAATCTGCAACTCAATCAGCTGTCCCCGGGGGCCAGCTACAGTGTGCAGGCACGAGTGTGCGTGTCCCACAGCGGGGATGAGCTGGGGTACAGCGGCACCTGGTCTGACTGGAGCCCGACAGGGCATTGGAGCACTCCACCAGACTTCTCTCTTCCGGCCTCCTGCTTCTACTTCCTGCTGTCCCTCAGTGTGGCTACGGTGGCTATGTTCCTGTTCTGTCTGTACAGACGGGCACACACGTGCTCAGACTGCTCCTGGTCTCCAGTGGAGGAAGACAGCGGTTCATACCAACGCATTACCTGGGCAGGGGTGTCCGGAACACCACTGCTTCTCCAGTGTGGTGATGGGGGGCAGGGCCAGGGTGGGGAGAGGCGGGTCTGGAACCAGGGatgcccctccccctccctcaacTTTACCGGGCCCTATATCCTGTGCCCACAATCCTCTGCTTCCAACCCTGACCTGGGGGCACCCTGTAGCTCCTACAACCCCTTCAGTTCCATCCCCAGTGACCAGCTTGGCCAGTCCAGCAATGGCTACATCACAGACCCTCTAGAGATGATGACCCGGTCTGAAAAAATCCCACTCGCTCTGTATGGGACATCTAAAATGGGGGTGTGGCCTGGGGAGGGGTCTGAAGGAAAGTTGGGGGAGGGATGTGGGGTGTTGGGTTTGGGGGTTCTGGAGGGGTATGTGGAGAGTTCCCCTAGCCTTACCACAGGTCCCCCACCTCTGCAGTTTGTCACGGGACATCCCATAAGTGACCCCAGCTCAGATACCCACTcaccctcctccctctcctgtGCCTCGccctcctctttctcttctttcccAGGCAAGCAGATGGCAGACAGTCTCCCAGACCCTCCCCCTGCCCACACTCTGTGCCCACAGTccatccccctcctcccctccccctcctcctcctcccacccACCCCTCCTCAACCAGGTGGGCGACTACTGCTTCCTCCCTGACCCCAGTGGCCAGGACTGGGACTCGGCCCACCCCCCTGGTGACCTCCTGCCCCCCACAGGTTCGAAGGATAAGCCGGGGTTGGGCAAGGCAATCGATGATGACCCGTACATCCGCCCAAACCAGCCTGTTCGGCTCAGGACCCCAGGGAACCACAACAAGGATGATCTTCTTGGCTGGGAGGTGCTGGGGCTCCTTGCTTTCGAGAGTGGAGGCAGCAAGCTGGGCCTGGTTTTGGCCAACCTTAAATCATAA
>TU92314
TGGGACTCGGCCCACCCCCCTGGTGACCTCCTGCCCCCCACAGGTTCGAAGGATAAGCCGGGGTTGGGCAAGGCAATCGATGATGACCCGTACATCCGCCCAAACCAGCCTGTGTGAACCCACCCTGGGGTCTGTTCACCCCTGCCATCAAGCCCAACTTACACTGGCCTGCATTGTATTACACTATaactattatattttacaatggaaTACAGTCAATATATTGGACAATGGAAGACAGATTACAGTCTTATATTGTATTACACTGTCtaacactgtaattacactgaTATTGTATTACACTTATATGGTATTTTACAACGGTAGTcaacagtgtaatacagtggaatagaattgattaaattcatacatTGCATTACATTGTTTCACACTCACATCGTATTAGTCTTAGTGTCTTATATTGATGTAAAAGGTACTACATGGTCTTATATTGTCCGACTCTGTGTTACTCAGTAGTGCTGAGCTGTTCTGCACACTTTACAGGCCCATCTCAACAATGTCAATACATATCAGAAGAAATCTATTATTTGGAATGCTtctatatacaatatttaaaaaaaaaatctcccacTTTTTAgcttataattgtattatgttttgatctgtactgtattattgcacttttgtattgctctaatattttgtaagtcgccctggataagatttctagttttataaattacattttataacgTTGTTTCACAAGGTTTTGGAGTGTACAGCAACCCTCTGCAATCGGTGTCTTGATAATGTCATACTGTCTGATCATCACTTTATCTTCTTAAGCAGAttaactgtgtgtatgtatgtttgcggggtggagggggggggtataaattcaattaatgtggtactgaattaaataatttgtgtgttgtgtgagctAGAAGAATGggcttactttgcatttagtttccTGATTTTCAACACCCAGTGAGCCTGTACTGGATTAAGTGGTTTTTGATAATGGGTGGATGGATAGAGTTTTCTATACCAAAGACCTGCAGGTATGCAGTACAGGCTATAATTGTCTGTATAACGGTATAAATCATTAACGATGCAGTGCGTCTGTACGgctctttgttttattgtatttgaccTTAGAATGTATAACTACGTAAATAAAATTCActtgcaatatttaaaaaccaaa

Function

GO: NA

KEGG:

id description
K04738 CSF2RB, IL3RB, CD131; cytokine receptor common subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014865 True 2770 mRNA 0.57 15 37802094 37864483
TU92314 False 1174 lncRNA 0.37 1 37843170 37844343

Neighbor

gene id symbol gene type direction distance location
AMCG00014860 NA coding downstream 185732 37602472 ~ 37616362 (-)
AMCG00014861 NA coding downstream 243885 37554889 ~ 37558209 (-)
AMCG00014859 NA coding downstream 380927 37417533 ~ 37421167 (-)
AMCG00014857 LOC108412080,LOC108430011 coding downstream 442385 37323742 ~ 37359709 (-)
AMCG00014858 NA coding downstream 492277 37302224 ~ 37309817 (-)
AMCG00014866 NA coding upstream 6923 37871406 ~ 37887963 (-)
AMCG00014871 NA coding upstream 80664 37945147 ~ 37954312 (-)
AMCG00014875 dnal4,dnal4b,LOC108261343,LOC106591471,LOC108436609,LOC108412416 coding upstream 172880 38037363 ~ 38040051 (-)
AMCG00014874 NA coding upstream 183003 38047486 ~ 38052112 (-)
AMCG00014878 NA coding upstream 261560 38126043 ~ 38128745 (-)
G73911 NA non-coding downstream 98046 37703846 ~ 37704048 (-)
G73908 NA non-coding downstream 118552 37683239 ~ 37683542 (-)
G73866 NA non-coding downstream 219932 37581766 ~ 37582162 (-)
G73857 NA non-coding downstream 227954 37573738 ~ 37574140 (-)
G73853 NA non-coding downstream 270118 37531470 ~ 37531976 (-)
G73980 NA non-coding upstream 198864 38063347 ~ 38071617 (-)
G74030 LOC106607450,LOC105029658,LOC103393291,LOC102224681,LOC103147375,LOC101072687 non-coding upstream 313491 38177974 ~ 38180598 (-)
G74052 NA non-coding upstream 416954 38281437 ~ 38283517 (-)
G74093 NA non-coding upstream 444602 38309085 ~ 38340216 (-)
G74128 NA non-coding upstream 623779 38488262 ~ 38488479 (-)
G73916 NA other downstream 18519 37779333 ~ 37783575 (-)
G73833 NA other downstream 476787 37325020 ~ 37325307 (-)
AMCG00014845 NA other downstream 1408601 36373151 ~ 36393493 (-)
G73612 NA other downstream 1547907 36253774 ~ 36254187 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other downstream 1619743 36101358 ~ 36182351 (-)
G74087 NA other upstream 478839 38343322 ~ 38350291 (-)
G74107 NA other upstream 547677 38412160 ~ 38413231 (-)
G74115 NA other upstream 567780 38432263 ~ 38432875 (-)
AMCG00014891 NA other upstream 624136 38488619 ~ 38492954 (-)
G74160 NA other upstream 732885 38597368 ~ 38644538 (-)

Expression


Co-expression Network