AMCG00014868


Basic Information

Item Value
gene id AMCG00014868
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37965377 ~ 37966906 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014868
ATGCTGTCTCTGAGCTCTCAACTGGGCCTGGAGGACCTGGCCCCTCTGTGGGGGCTGGGGTCTCTGACGGCTGACTCCCTGGGTCCCCTCCTGGACCAAGAGCCTCTGGAGGGGGCACAGTCTCCCCCCtctgcctgctctctctctccctcttcctctccttcctcctcatcctccccctcttctctcttcGGCTGCCCCTCAGTGGGTAAGCCCGTCGATGACGATGATGTCCTGGCGCCCTTCCACTGGCTGTCTGCTGGCTCTCTGCTGGATGCCAATGCTGTGTATGGCAGCAAAGAGGATGCCTTCTCTGGCATGGATTGGATGGCAGAGAAGATCGACCTGAGCGAGTTTGACTTGGACTCCCTCATGGGCTCCTGTGAGTCTGACAGCCCCCCCAGCTCCCCCGAAGAGCTCCTGGCCTCGCTGGAGCAGCAcatggagctggagctggagctggaccTGCCCCTCCCTGACCCCCTGGCCCCGCCTCTCCTCCCCCAAGCCCTTGAAGATCTAGCTCCTGCAGCCACCTCCATCTCCCCCTCTGCCCTCCCAGAGCTGCTGCAATCGGAAGCCGAAATCCAGAGCGAGCCCGTACCCTCCTCACCTCCCTCTCCTTCGACTTCCCCCCCACCAGAGCCCACCTTCTCCCTGGACCTGGGCAGCGAGGTGGATGTGTCAGAGAGTGAACGACCTCTGGCTGAACCTACAGCTCCACCTGTTGCCTCCACTCCACTGCCAGCCTTCCCCCAGCTGACTGTGCTTGCCCTCTCCCCCTCACAGCTTGTCCTGCTCCTGCCCCCCACGGAGAAGGTGGCCCTCGCTACTACCCCTCCCCCCATCACCATCGCTGCCCAGGAGGAGTCGGACAGCGACAGCGGGGTGGGCTCTGGCTGGGGCTCCCCTACTCACAGCCTGGACCCTtcctccccttccccttcctccTCTCGAGCCAAACCCTACTCCTGTGCCGCCCACGAGGAGAAGAGGATGAAACGGAAGTCCCAAGCAGCAGCAGGGACCGAGATGACGGGCTCCTCTCCATCTGCGGCCCCAGCCCAGCCTCTCAAAGTGGTGCCGAAGCGGCTGAAGAAAATGGAGCAGAACAAGACCGCTGCTACTCGCTACCGGCAGAAGAAGCGGGCTGAGCAAGATGCCCTGAACGCCGAGTGCATGGAGCTAGAGGGGCGCAACCGGGTCCTGGGAGAGCGGGCTGAAGCCATCGCCAAGGAGATCCAGTACCTGCGCGACCTGCTGGAGGAGGTGCGCTCTGCCAAGAACCGGAAGAGCCGGGCAGCCGGAGGGGAGGGTGGGCCATTGTCACCCTGA

Function

GO: NA

KEGG:

id description
K04374 ATF4, CREB2; cyclic AMP-dependent transcription factor ATF-4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014868 True 1335 mRNA 0.64 2 37965377 37966906

Neighbor

gene id symbol gene type direction distance location
AMCG00014869 NA coding upstream 8861 37954370 ~ 37956516 (+)
AMCG00014867 NA coding upstream 20625 37935591 ~ 37944752 (+)
AMCG00014870 NA coding upstream 60401 37901797 ~ 37904976 (+)
AMCG00014863 NA coding upstream 209529 37754859 ~ 37755848 (+)
AMCG00014864 NA coding upstream 210854 37753795 ~ 37754523 (+)
AMCG00014873 NA coding downstream 56683 38023589 ~ 38027260 (+)
AMCG00014872 NA coding downstream 106778 38073684 ~ 38088035 (+)
AMCG00014876 NA coding downstream 202963 38169869 ~ 38176166 (+)
AMCG00014877 LOC103393291,LOC102224681,LOC106943710,LOC107376358,LOC103147375,LOC106607450 coding downstream 210968 38177874 ~ 38180456 (+)
AMCG00014882 NA coding downstream 253615 38220521 ~ 38227829 (+)
G73944 NA non-coding upstream 32582 37932522 ~ 37932795 (+)
G73939 NA non-coding upstream 80689 37876261 ~ 37884688 (+)
G73917 NA non-coding upstream 144015 37821086 ~ 37821362 (+)
G73914 NA non-coding upstream 219190 37745983 ~ 37746187 (+)
G73889 NA non-coding upstream 256576 37708286 ~ 37708801 (+)
G74067 NA non-coding downstream 344570 38311476 ~ 38313617 (+)
G74157 NA non-coding downstream 682016 38648922 ~ 38649249 (+)
G74159 NA non-coding downstream 684491 38651397 ~ 38655398 (+)
G74192 NA non-coding downstream 744802 38711708 ~ 38712076 (+)
G74195 NA non-coding downstream 746759 38713665 ~ 38714115 (+)
G73850 NA other upstream 446971 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 2552790 35390634 ~ 35412587 (+)
G73343 NA other upstream 3004930 34942011 ~ 34960447 (+)
G73329 NA other upstream 3184787 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 3725977 34238934 ~ 34239400 (+)
G74114 NA other downstream 465468 38432374 ~ 38432861 (+)
G74227 NA other downstream 843787 38810693 ~ 38811128 (+)
G74348 NA other downstream 1369362 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 1617132 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 1639981 39606887 ~ 39621186 (+)

Expression


Co-expression Network