AMCG00014871


Basic Information

Item Value
gene id AMCG00014871
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37945147 ~ 37954312 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014871
TTCCGTTGTCGTTTCTATTCGGAACCCGTTTCGCGTAACATCGTTTCCCAACCGGAGGTTTATAGTGACACATCGGAAGTTGTCtacatgtgtgcatgttttgcGAAACCGTATCCCGGACCGAAACACGTCTCCGTCTATCGTTTGTAGTAAAACTTAGATTATTGGAGCGGGACAGGGTCAGGATATGTCAGCGTCTCTTATGAGAAAGGGCCTGGAGCTGCTCAGCGATGATCTAAAAGACACAGAGAGGCGGGGGAAAaagaagagggagagtgggGAGAAGGCAGGAGGGGCAGGCAGTGTGAAGGACTGTATCGGCACCAACCGGCAGGGCGTGTCCAAACAACGGAGGCAGCAGAGTCCCAGTCAGATGAACACAAACCTGCAGTATTTTCTGGGAACAGGATTCAAAACGGAGCAAGCAGTTACAGAGAAGATTTTGACCCAGCAACGGGGCAGACAGTCTCGGGACGTCCCACAGCGAAGGGAGCAGCCACGGGCAAAGGAGCCGCGGTCTGTCTTCACAGAGGAGGAGTTCCAGCAGTTCCAGAAGGAATATTTCGGCAGGACAGTGGAGGGAGTGCAGTGACCCCCACATTACGCCTGAAATGCtggtggagagggggagggggtcagTCCCTCAAATGCAATAATGTTGGTCACCCTATTCAGGTCTCACCTCTGAAATCCATGAAATCTCTCTTGCTTATTACTATAAGGgaaattcacacaaaaataataataatttaaaaaaaaagtaaatccaTATTGGCATTTTAATACAGTGAGCAAAACTATGCAGGACCATGCAGTCAAGTCAGTGTATtagtcaatcaatcaaacaaatttTAATGGATTCCATAGAAACCTACTGCCTTCCCCTGTCTCCATTGTAGATACCCAGCTCAGCTGAGAGCAACACTGATGGCCCATGTGCTGAGGTCAGTGGTGGCTCAGGCATCTGAGCAtagaggtcaggggtcagttACATGTGAATGGCCTGCATTGTGTGAGCCAGGCTGAGGGTGTGAGAATGGGTAATCCAATAAAGCACAGAGAGGTATCAGCAGTGTGTCTTTTCTGGTCTGTCTACTGTaacaatactgtactgcacattGACTGTGCTACACATTGTACTCTGTGTACTACACACTACTATACGtactcactgtacatacactaCTGTACTGAATCACTGTACTCAAAGAGGAGTGTGCAAA

Function

GO: NA

KEGG:

id description
ko03060 Protein export
ko03018 RNA degradation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014871 True 1223 mRNA 0.48 4 37945147 37954312

Neighbor

gene id symbol gene type direction distance location
AMCG00014866 NA coding downstream 57184 37871406 ~ 37887963 (-)
AMCG00014860 NA coding downstream 328785 37602472 ~ 37616362 (-)
AMCG00014861 NA coding downstream 386938 37554889 ~ 37558209 (-)
AMCG00014859 NA coding downstream 523980 37417533 ~ 37421167 (-)
AMCG00014857 LOC108412080,LOC108430011 coding downstream 585438 37323742 ~ 37359709 (-)
AMCG00014875 dnal4,dnal4b,LOC108261343,LOC106591471,LOC108436609,LOC108412416 coding upstream 83051 38037363 ~ 38040051 (-)
AMCG00014874 NA coding upstream 93174 38047486 ~ 38052112 (-)
AMCG00014878 NA coding upstream 171731 38126043 ~ 38128745 (-)
AMCG00014879 NA coding upstream 187595 38141907 ~ 38160087 (-)
AMCG00014883 NA coding upstream 307218 38261530 ~ 38263484 (-)
G73918 NA non-coding downstream 118445 37826479 ~ 37826702 (-)
G73911 NA non-coding downstream 241099 37703846 ~ 37704048 (-)
G73908 NA non-coding downstream 261605 37683239 ~ 37683542 (-)
G73866 NA non-coding downstream 362985 37581766 ~ 37582162 (-)
G73857 NA non-coding downstream 371007 37573738 ~ 37574140 (-)
G73980 NA non-coding upstream 109035 38063347 ~ 38071617 (-)
G74030 LOC106607450,LOC105029658,LOC103393291,LOC102224681,LOC103147375,LOC101072687 non-coding upstream 223662 38177974 ~ 38180598 (-)
G74052 NA non-coding upstream 327125 38281437 ~ 38283517 (-)
G74093 NA non-coding upstream 354773 38309085 ~ 38340216 (-)
G74128 NA non-coding upstream 533950 38488262 ~ 38488479 (-)
AMCG00014865 NA other downstream 80664 37802094 ~ 37864483 (-)
G73916 NA other downstream 161572 37779333 ~ 37783575 (-)
G73833 NA other downstream 619840 37325020 ~ 37325307 (-)
AMCG00014845 NA other downstream 1551654 36373151 ~ 36393493 (-)
G73612 NA other downstream 1690960 36253774 ~ 36254187 (-)
G74087 NA other upstream 389010 38343322 ~ 38350291 (-)
G74107 NA other upstream 457848 38412160 ~ 38413231 (-)
G74115 NA other upstream 477951 38432263 ~ 38432875 (-)
AMCG00014891 NA other upstream 534307 38488619 ~ 38492954 (-)
G74160 NA other upstream 643056 38597368 ~ 38644538 (-)

Expression


Co-expression Network