AMCG00014872


Basic Information

Item Value
gene id AMCG00014872
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38073684 ~ 38088035 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014872
CTTATAGCAGTGAAAAGTCAGAGATACACAGAGATCGGCGAGAGTCTCTTGGTTTCAGATACCTAGTCAACTGCTTGTgactgagaaacagcacagctctttctcaacagctgctgatGGAGTTTCTGGGACGGCTGGTGGGCACGCTGTCCTCGGTCAGTACACTATTTTCCAACCCCTACCGCGTGCGGGatgtcccattgtcagagtACAGGTCGGGTGGGGGGCGTACGCAGCTGCAGGTGGAAGGACGGGTGCAGCTGTACAGGAACCCTCCGGCCCACTCCTGGGACTGCCTGCTGACCTGCCCCGACACGCCTGGCACTGCCCTTAGgcTGTTCCAGGTCACCTCAGAGGAAGATGCTCGAAACTGGTTTCCCCAGTATGGCCTGAAGCTCCGCCCCTTCTATGAGAGTGCCCGGGCCCCGCTCCGCCCAGAGACACTGCAGCCAATTGTAGACTGCCTTCGCAACCACCCTGACTGGAGCTCCGCCCACATCGCCGTCGAAACCGGGGTCAGGGATTGTCTTCACAACAACTATGTAATGAGtCAGATAAACAATCATGACGGGGTGGAGGGCCGCACCCCCCTACACCTGGCCTGTTGCCATGGTGATGTGGGCTTGGTCAGGGAGCTGTTGGAGGAGTGTGGAGCACGGCTCGACATCACTGACCGGCAGGGAGAGACGCCCCTGCACTGCGCCGCCCGGCTGGACACTGCAGCGGTCACTgagctgcTGTGCTCGTGCTCCCGCCCCAGCCCTGGGCTGGACACGGTGAGTGTTGCTGGGGAGACAGCCCTGCACGTGGCCTGTCGCCTGGGCAAGGCGGAGACTGTGCAGGTGTTGCTGGGGTGTGGGGCTCGCTGTGACGTCATGGGGGGGCACGGCTACCCCATCCACACTGCCATGAAGTACAGTGAAAAGAGCTGTGCGGAGGCTATCCTGGGTGCTGACCCGACCCAGTTGCAGTCAGAGGACCCAGTGTACGGAGGGACCCCACTCCACTGGGCTAAGACTGCCGAGATGTGCCGGCTGCTGCTGGACCGAGGGGGCAGTGTGAATGCACTCAGTCGAACTGCAGACACGCCCCTGCATGTGCTGGTGCACCGGTGCAGGTTCGAGGCAGCCATGGTGCTGCTGACCCACGGAGCCCCGGCCAATGCACAGGGCCAGCATGGGGACACGCCTCTCCACCTCGCCATGAAGCTGGACCACATGGAGCTGATCAAGGCTCTGATCGTGTTTGGTGCTGACGTGGAGACACCCAATGACCTGGGGGAGACGCCTGGACTCATTGCTGCCCGCACCAGCAAGGGGCCCAACAGGAAAGTCCTGCTGAGCATGCTGTGTAGCATAGGGGCCGAGCActgccaccccccctcccctgccaCCCCCCCGCAGATCCTCAAgagaccaccaccaccacctatAGCGTCTCTTCTCCTGCCCTCCTGGCTGCAgtgCGAGCGGCTGCTGTGTCTGGACGGGGGCGGGATCAAGGGCCTGGTTCTGATCCAGTTGCTGATCGCCCTGGAGCATGTGGCCGGCCGGCCCATCAGGGAGCTCTTCGACTGGGTCAGCGGCACCAGCACCGGCGGCATCCTCGCCCTTGCCATCGTACATGggAAGTCGATGGCGTACCTGCGCTGCCTGTATTTCCGGATGAAGGACGAGGTGTTCCGGGGCTCCAGGCCCTATGAGTCGGCACCACTGGAGGAGTTTCTGAAGAGGGAATTTGGGGAGCACACCAGGATGGGGGACGTTACACACCCCAAGGTGATGGTGACCAGTGTGCTGGCGGACAGACACCCTGCAGAGCTGCACCTATTCCGGAACTACGACCCCCCCGACCCTGGCCGCAGCCCCCCCTATGCCCGCACTGCTGACTTCCAACCGCTCACACTCCCCCATGgggAGCTGGATGAAGATGTTGTGATAGTGGGGTACACTGCCCCCCTGAAACACGCTGaagAGCAGTTAGTGTGGCGGGCAGCCCGGTCCAGTGGTGCCGCCCCCACCTACTTCCGCCCAATGGGGCGCTTCTTGGATGGCGGGCTTCTGGCCAATAACCCGACATTGGACGCCATTACTGAGATACACAGATGCCACCGCTCTCTGAGGGAGCAGGGCCAGGAGGGGCACAAGCAGAAGCTGGGGGTGGTGGTGTCCCTGGGCACGGGGCGTCCCCCCCAGGTGCCAGTTACCTCTGTGGATGTGTTCCGGCCCTCCAACCCCCTGGAGCTCGCCAAGTCATTCATGGGAGCCAAGGAGCTGGGCAAAATGCTGGTGGACTGTTTCTCAGTGGAGGTGCTGCTGGACGAGGTCAGCGATGCTGTGCTGGTCAACATGCTGTGGGAGACGCAGCTCTACTTGTACCAGCAGAGGGAGCAGCTGCACAGCCtggcacagctgctgctgcagggaTAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG:

id description
K16343 PLA2G6, IPLA2; calcium-independent phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014872 True 2429 mRNA 0.62 18 38073684 38088035

Neighbor

gene id symbol gene type direction distance location
AMCG00014873 NA coding upstream 46424 38023589 ~ 38027260 (+)
AMCG00014868 NA coding upstream 106778 37965377 ~ 37966906 (+)
AMCG00014869 NA coding upstream 117168 37954370 ~ 37956516 (+)
AMCG00014867 NA coding upstream 128932 37935591 ~ 37944752 (+)
AMCG00014870 NA coding upstream 168708 37901797 ~ 37904976 (+)
AMCG00014876 NA coding downstream 81834 38169869 ~ 38176166 (+)
AMCG00014877 LOC103393291,LOC102224681,LOC106943710,LOC107376358,LOC103147375,LOC106607450 coding downstream 89839 38177874 ~ 38180456 (+)
AMCG00014882 NA coding downstream 132486 38220521 ~ 38227829 (+)
AMCG00014881 NA coding downstream 146662 38234697 ~ 38244140 (+)
AMCG00014880 NA coding downstream 164927 38252962 ~ 38257417 (+)
G73944 NA non-coding upstream 140889 37932522 ~ 37932795 (+)
G73939 NA non-coding upstream 188996 37876261 ~ 37884688 (+)
G73917 NA non-coding upstream 252322 37821086 ~ 37821362 (+)
G73914 NA non-coding upstream 327497 37745983 ~ 37746187 (+)
G73889 NA non-coding upstream 364883 37708286 ~ 37708801 (+)
G74067 NA non-coding downstream 223441 38311476 ~ 38313617 (+)
G74157 NA non-coding downstream 560887 38648922 ~ 38649249 (+)
G74159 NA non-coding downstream 563362 38651397 ~ 38655398 (+)
G74192 NA non-coding downstream 623673 38711708 ~ 38712076 (+)
G74195 NA non-coding downstream 625630 38713665 ~ 38714115 (+)
G73850 NA other upstream 555278 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 2661097 35390634 ~ 35412587 (+)
G73343 NA other upstream 3113237 34942011 ~ 34960447 (+)
G73329 NA other upstream 3293094 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 3834284 34238934 ~ 34239400 (+)
G74114 NA other downstream 344339 38432374 ~ 38432861 (+)
G74227 NA other downstream 722658 38810693 ~ 38811128 (+)
G74348 NA other downstream 1248233 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 1496003 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 1518852 39606887 ~ 39621186 (+)

Expression


Co-expression Network