AMCG00014877 (LOC103393291,LOC102224681,LOC106943710,LOC107376358,LOC103147375,LOC106607450)


Basic Information

Item Value
gene id AMCG00014877
gene name LOC103393291,LOC102224681,LOC106943710,LOC107376358,LOC103147375,LOC106607450
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38177874 ~ 38180456 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014877
ATGGCCGCCAGGCATCCACCCCGGTGCTGTCCACGGCCAGTGCCTGAAGGTCCTTCGAGGAAAACAAACCGAGGAGGTCCTAGCGGGGTGTGGATGAGCAGCAATGTCCGGGATTGCTCTCAGCAGACTGGCGCAGGAACGCAAAGCCTGGCGCAAGGACCATCCCTttGTAAATTCGAGCCTCCCATCTTCCACCCCAACGTCTATCCGTCCGGCACTGTTTGTCTGTCCATCCTGGAGGAGGACAAAGACTGGAGACCTGCCATCACAATCAAACAGATCCTATTGGGAGTCCAGGAGCTGCTGAATGAACCAAACATCCAGGACCCAGCACAGGCAGAggcatacactatatactgTCAGAACAGGATGGAGTATGAGAAGAGAGTCAGAGCTCAGGCCAAGAAGTTTGCACCCATATAGAGCTGATGGTTCACATGTGCACTTTAAACCCAAACGCCAGCACTAGAAGATGGAGGGatgaaagggggagagagagagagagagagagagagagagaggga

Function

NR:

description
SUMO-conjugating enzyme UBC9-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0019789 SUMO transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014877 True 524 mRNA 0.54 5 38177874 38180456

Neighbor

gene id symbol gene type direction distance location
AMCG00014876 NA coding upstream 1708 38169869 ~ 38176166 (+)
AMCG00014872 NA coding upstream 89839 38073684 ~ 38088035 (+)
AMCG00014873 NA coding upstream 150614 38023589 ~ 38027260 (+)
AMCG00014868 NA coding upstream 210968 37965377 ~ 37966906 (+)
AMCG00014869 NA coding upstream 221358 37954370 ~ 37956516 (+)
AMCG00014882 NA coding downstream 40065 38220521 ~ 38227829 (+)
AMCG00014881 NA coding downstream 54241 38234697 ~ 38244140 (+)
AMCG00014880 NA coding downstream 72506 38252962 ~ 38257417 (+)
AMCG00014884 NA coding downstream 170791 38351247 ~ 38359131 (+)
AMCG00014887 NA coding downstream 277913 38458369 ~ 38466227 (+)
G73944 NA non-coding upstream 245079 37932522 ~ 37932795 (+)
G73939 NA non-coding upstream 293186 37876261 ~ 37884688 (+)
G73917 NA non-coding upstream 356512 37821086 ~ 37821362 (+)
G73914 NA non-coding upstream 431687 37745983 ~ 37746187 (+)
G73889 NA non-coding upstream 469073 37708286 ~ 37708801 (+)
G74067 NA non-coding downstream 131020 38311476 ~ 38313617 (+)
G74157 NA non-coding downstream 468466 38648922 ~ 38649249 (+)
G74159 NA non-coding downstream 470941 38651397 ~ 38655398 (+)
G74192 NA non-coding downstream 531252 38711708 ~ 38712076 (+)
G74195 NA non-coding downstream 533209 38713665 ~ 38714115 (+)
G73850 NA other upstream 659468 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 2765287 35390634 ~ 35412587 (+)
G73343 NA other upstream 3217427 34942011 ~ 34960447 (+)
G73329 NA other upstream 3397284 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 3938474 34238934 ~ 34239400 (+)
G74114 NA other downstream 251918 38432374 ~ 38432861 (+)
G74227 NA other downstream 630237 38810693 ~ 38811128 (+)
G74348 NA other downstream 1155812 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 1403582 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 1426431 39606887 ~ 39621186 (+)

Expression


Co-expression Network