AMCG00014879


Basic Information

Item Value
gene id AMCG00014879
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38141907 ~ 38160087 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014879
AGCCAAGATGGCACTGCTGCCAGTGTTGAAGCTGCCCAGGACCTGTCAGCACACAGTGAGAAGGATCCGGGGGAAGGTGCTCCTAATTGCATCCTTTCGTGGCTGCTACGTGTGGAAATTGGAGAAGGATGGCAGGCTGTATGCTGCCCTGACTATACGCTACTATGACCTTATCCTGAAGATGACCCAGGTGGCCACTGTGTCCTGCCCACTGAAAACAACCCAGCCACAGCTACCCAAGGGGCTGTCCATCTCATGCAGTGAAGTCTGCATGACTGTACACCTGCCCACTGGGCCCCTGTCTGCTGTCCAGATCCTGGACTCCTCCAAAGCACTGGTCCCAGTGCTGCAGATGCCCAAGTCCTGTGGCTACTCCCTGGTCAGGGGCCAGGGCAAGAATGTACTGACCATCCCCTACACTGCCTGTGACATCtgCTTTCAGGAGCAGCGGTACACAATCCAGGTGGTGTACATGACTGCAGCAGGGGAGAGAGCAGAGATCCAGGTGTCCTGCCCCTACCGCAAACTACAGCCCCGGCAGGGTTGCCACATTCCCAAGAGCCAGCAAGTCTCCTGTGGGCCCAAAAGTGTTCGTGCGACAGCGTGTTTGGCCATTGGCTGCTGTGTGGACCCTGAGACTGCGCACTGCTACTACCCTCTGGAGGAATGTACATCTGACAAGCAGTTTGTCTTTGCTGTCCACCGTACCCTTACTGCCCCCCCTGTGGACCCATCCTCTCTGGCCATTGCTGGCAACAAGTCCTGCACCCCTGTCATCTGCACCCCTGATTTTGCGGTCTTCAAGTTCCCAGTGACTGGCTGTGGGACCCATGCCTTTGTGGTGGGCGAGACCACTATCTACTTGGCAGAGGTGATGGCCATGGCACGACGCAACCATCTGAACTATGGTGTGATCACCAGAGACAGCCCTTTCAGGTTGCTGGTTGAGTGTCGCTATGCAGAGGATAACCTGGTCAGCACTGGCTACCTGGTAAAGAGCCCCTACCTACCCAGCACTATCCTGTCCCCTGGGGTGTTTGGGGTGCAACTCAGAATTGCTACTGATGACAGCTACAGCCGCTTCTACCCTCAATACCACAGACCTCTGTGGCTGCTCCTGGGCCACCCTGTGTATCTGGAAGTGCGGTTGCTTAGCTCGCCAGACCCtaacctgctgctgctggtgcacTACTGTGTCGCCTACCCCCGCTCTGCCCGTGCTGTCTGGGTGCTGCTGTATGAAGGCTGCCCTAACCCCCTGGACTATGGCCATACCTCGACCCTGCATGTCAACAACCAGCTGCCCCTGCCCAGACAGCACCGCCGCTTCCACATCACCACCTTCCAATTCATGGATCGCACGGTGCAGGCGTACCTGGATGAGGAGATCTACTTCATGTGCTCCACTGAGGTGTGCTCTCCGACCATGAAGACCTGTGTGGAGGGCTGCTTTGATGGGCGCAGTGAGTTGGCCTTAACATGCAGTTCCCGTTGACTGGCTGTGGGACCCATGCCTTTGTGGTGGGCAAGACCACCATCTACCTGGCGGAGGTGACAGCCCTGGCACAACACAACAGCCTGAACTATGGCGTAATCACCAGAGACAACCATTTCAGGTTGCTGATTGAGTGTCAGTATGCAGAGGATAACGTGATGAGCACTGGCTACCTGGTAAAGAGCCCCAACCTACCCAGCATTATCCTGTCCCCTGGGGTGTTTGGGGTGCAGCTCAGAATTGCTACTGATTATACCTACAGCCGCTTTTACCCTCAGTATCACAGACCTCTGTGGCTGCTCCTGGGCCACCCCATGTATCTGGAGGTGAGGTTGCTAAGCTCGCCAGACCCCAACTTTCTGCTGCTGGTGCACTACTGTGTCGCCTACCCCCACTCTGCCCgtgctgtctgtgtgctgctggTTGAAGGCTGCCCCAACCCCCTGGACTACGGCCATATCTCCACCCTCCATGTGAACAACCAGCTGCCCCTGCCCAGACAGCACTGCCGCTACCACATCACCACCAGTTCATGGATCACTCGGTGCATGCATACCTGGATGAGGAGATGTACTTCATGTGCTCAACTGAGGTGTGCTCTCCAGCCATGAAGACCTGTGTGGAGGGCTGCTTCGAAGGCCGCAagaTCCCAGTAGTACCAGACCCCAACATAGATGCCTGTTGTCTCCGGAAGCCCTGTCCAGGAGgGCTGTGCTGGACCCTGTGGGTGTTCCTGCTCTCCACCCTCCTGCAGGCTTTGTGCTGCTGTCTCTGTAATGGCTGGCACCTGCTGTTGGCTGACTGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014879 True 2300 mRNA 0.57 19 38141907 38160087

Neighbor

gene id symbol gene type direction distance location
AMCG00014878 NA coding downstream 13162 38126043 ~ 38128745 (-)
AMCG00014874 NA coding downstream 89795 38047486 ~ 38052112 (-)
AMCG00014875 dnal4,dnal4b,LOC108261343,LOC106591471,LOC108436609,LOC108412416 coding downstream 101856 38037363 ~ 38040051 (-)
AMCG00014871 NA coding downstream 187595 37945147 ~ 37954312 (-)
AMCG00014866 NA coding downstream 253944 37871406 ~ 37887963 (-)
AMCG00014883 NA coding upstream 101443 38261530 ~ 38263484 (-)
AMCG00014885 NA coding upstream 142965 38303052 ~ 38317017 (-)
AMCG00014886 syngr1,syngr1a coding upstream 170044 38330131 ~ 38339363 (-)
AMCG00014888 cacng2,LOC103372897,LOC102214005,LOC101463732,LOC100710835,LOC108237679 coding upstream 203815 38363902 ~ 38402794 (-)
AMCG00014889 NA coding upstream 255315 38415402 ~ 38423841 (-)
G73980 NA non-coding downstream 70290 38063347 ~ 38071617 (-)
G73918 NA non-coding downstream 315205 37826479 ~ 37826702 (-)
G73911 NA non-coding downstream 437859 37703846 ~ 37704048 (-)
G73908 NA non-coding downstream 458365 37683239 ~ 37683542 (-)
G73866 NA non-coding downstream 559745 37581766 ~ 37582162 (-)
G74030 LOC106607450,LOC105029658,LOC103393291,LOC102224681,LOC103147375,LOC101072687 non-coding upstream 17887 38177974 ~ 38180598 (-)
G74052 NA non-coding upstream 121350 38281437 ~ 38283517 (-)
G74093 NA non-coding upstream 148998 38309085 ~ 38340216 (-)
G74128 NA non-coding upstream 328175 38488262 ~ 38488479 (-)
G74137 NA non-coding upstream 346105 38506192 ~ 38575968 (-)
AMCG00014865 NA other downstream 277424 37802094 ~ 37864483 (-)
G73916 NA other downstream 358332 37779333 ~ 37783575 (-)
G73833 NA other downstream 816600 37325020 ~ 37325307 (-)
AMCG00014845 NA other downstream 1748414 36373151 ~ 36393493 (-)
G73612 NA other downstream 1887720 36253774 ~ 36254187 (-)
G74087 NA other upstream 183235 38343322 ~ 38350291 (-)
G74107 NA other upstream 252073 38412160 ~ 38413231 (-)
G74115 NA other upstream 272176 38432263 ~ 38432875 (-)
AMCG00014891 NA other upstream 328532 38488619 ~ 38492954 (-)
G74160 NA other upstream 437281 38597368 ~ 38644538 (-)

Expression


Co-expression Network