AMCG00014884


Basic Information

Item Value
gene id AMCG00014884
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38351247 ~ 38359131 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014884
CGGGAATTCAAAATGGCGGGTTTAGACGGGTTGACCCATACGGGGAATCGCTGTAGAGGTTGCTAGGAAACCAGGCGTGTATAGGTTGCCAGGTTGGTCGGCAAGAATAACGTATCggctttgtatttcatttttacatgacaaaaatatccaaaacaaGGGAACTCATTGAACATTTACGAGAAAACGGACATACGGATACACCGAATCCATCCCGCGACGACTTTACGGGCGTTAGTTACCCGTGCCGTACACTGTCATGGTGAAGTTACGGGCTAAGTGTATATTGGCAGGAAACGCAGCTGTGGGAAAGACTGCTCTGGTCCAGATGTTCCTCAGTGATGGAGCTCACTTCCAGAAGAACTACAGCATGtCGGCAGGGGTGGAGGTGGTGGTGAAGACTGTGAGCATTCCAGACTCCAGCGACAGTGTGGAGCTGTTCATCTTTGACTCAGCTGGGAGAGAAGTCTTTTTGGAATCCTGTGAGAAACTGGTAGAGGCAGGGGTGGCCAGAGACTGGGCCCAGAGCCAGGGGCTGGAGTACTTCGAGACCTCTGCTAAGGAGATGCAGAGTTTTGAGCTGCCCTTTCTCGGCCTGGCTCAGACCTTTCACCGGGTCTATCAGGACAGAGTGCAGGCTTTGCGCACCCTGGCATAGGATCCCCATCCCCTGGGACCACCACACTGGGCCCCAGCCTTGGCCCTCGAGTCTGTGTCCTCATCAGCCCAGTGTGGACTGCAGGCTCACCTGGTTTGGTATCACAGGCACTGGAGCCACTGGACTGCCTTCTGACCCAgcacactttatatatatatatatatatatatatatatatatatatgttatttttgtttcatatgcATTGCCTATAAATCATATGCTTTGGCTACACCGAAGAGAGAGGTCAcgccaataaagcttgttttgaattaaattgaattgagagagagagagagtgccgGGGAGCGGGGATTGTGGAGGGAGAGATACTGTGAGGCGGTCACAGGATGGCCACCCTCCTCCCCAGCAACTCTCCCTCAACTCAAGTCAAGGAAGAGCGCACACTGCACTTATAGAACGCACATGCATTGTGAAACTGTGCTAATGATGTGTGCTTCTTGTGTTGTATTTCAAATGGGATGTATTTGACATGTATTTCAGCCTTTCCTCCGTATATCTAAGAGAGGTTGATTTCCACAGGACCTTTACAAcatgtacaataaatatatggagGACAGACAAAAATAGATTTCAAATACTTGATTACAGTGCATCAGAGCCCACCATTAGAGATAGTGTGATGCTGCCATTGTGCTGTAGTGTGAGAAAGAGACAGTTTAATccccagacagacagcagaggCCTCAGCCCTAGTCCTCCCCACTGCTGTGACTGTTCTCCCTGTGAGACTTTGTGCTGAGCTGAGGTCGGTGGTACAGGTGTGCAGTGCAGCAGCTGAGCAGACAGATCAGGGGGACagtgctgtgtgctgctgtggtCGCCATCTTGCTGGAAATTGGAGGTTACTGGAGGAAGTTGAGAAAGCCAGGACTACTGACAGCACTACAGCACCCACAGTCCCAGCAGAGTTCAGCACAGGAATTGTGCCAGAGGACCTACACCCTGCTGCTCGCAGCCCTCCGAAAGACAGACTCCGTCCAGCAGACCCTACCTGTGcgactgtgtctgtctgtgtatgcatgcatgtttgTCTGTCATTTCAAATTCTAGACAAGCTTTATTAGCATGACGAGTCTACCCAAGTCTTGCCAAAACATTTAGATTGAGTGTCTGTGCAGATGTTGCTCTGTGtacgtctctctgtgtgtcttctgcttctctgtgtgttcctctgtgtctCTGGCTGTCCCTCTAcgtctctgtgtgtcactggGCGTCCCTctgcatctctctgtgtctctgggcATCCCTCTGCTTCTCTGCCTGTTTTTCAGGCAGCTAGGTGAACAGTGCGTCGCCGGCAGTATTAGTATTCTGTTCCTGCCTCTAGTGTCACACTGCATCGACTGCAGAGGACCAGTGGTCTGGGGGTGCAGTGCCAGGGAGCACCACCAGAGGGAGTAAGAGTGCAGTGGATCTCCCTGATAGGTGAGGAGAAGAGAGGTGAAGAGAGCAGTGGAGTGGAGGCTGCAGTCATCCTCTCCACTGCAGGGAGCCAGATGAAGACCCACTACGCTGACAAACTGAagctgacacacatacacacattcatactacacacttacacacaccaTCTCCACACCCCTGCCTTTCACACTCTCTTTCTCAAACTCTCCATCCCTGTGCTGGTgtgtgcagcagcagcaattCTTCCTCTCCAGCAGGTGGTGCTGCTCTGTGCTGACCTCCACGCTATaactcttcttcttcctccccctctccccctctggCTCTTCTGCCAGCAGCACAGTGATCACACAGCtttacactacacacactggcCTTTGATCAGCTCCCTGGGACACaacacagcgagagagagaggcaccGAGGGAGAGtcacacagactgacagagagagagagaggtaactGGGTCTCTCTCCAGACGAGTAGTTGTCTACCCTGAACCTAGGGGCACTGCTGGTCTattttattagttaaattaactaaaactcTGCCTTGATTTACTTTTGTGGACAAACGCTAAAGTCTCCTCTTTTGTCTACacccctctcgctctctcaaattgaaatttaaaaagctttattggcatggccAAAGATAGTATGGCCAAAGCAATAATGACAATTATCAAGAACTATAAACATGAATAAtgacaatcataataataataggaatgACAGGTGATATTAACAGTATTTACATACAATAATTCCATAGGAGGGATAAGGTTTAGTGAGCAGAATGATTCAGTTGCTGCTCATTGGTCATGCCCacctcctgcctcctgcctccttCAGAGTAAGGCGATGTCAACAGATTGACTTTGATATCAGAACTAGAGGCACACGCCCACATTTCATTTGCTGAGCAGGCCGTATATGCGTGCAGTTATTCAGAACTCCGAATACCAGAGGGATGTTAGGGGCCGGTGGAGAATTCGGTCTGTCAGGTGGTGCGAGGGCCCTGCCAGCTTTTATGCctgaattgttgttttttccagaatTTTTCAATAAAGAGgttaaaaggttaaaaggtcaaaagtctccctctctcagctgCCAGAGAGTTCCCAGGAGGGAGGCAAGGTGGCAGTGGTgggttgggggagggggcagtCTCTCACTCCTGTATGTGCACTGTGCCTGTGTACCTGTTCAGAgtgggacagacagagagagaaagagggatggagagagagattcagtgaccacagcctggccattaggtgtgtttacactgccatttctgatcctgatcaat

Function

GO:

id name namespace
GO:0048856 anatomical structure development biological_process

KEGG:

id description
K07934 IFT27, RAYL, RABL4; intraflagellar transport protein 27

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014884 True 3407 mRNA 0.49 6 38351247 38359131

Neighbor

gene id symbol gene type direction distance location
AMCG00014880 NA coding upstream 93830 38252962 ~ 38257417 (+)
AMCG00014881 NA coding upstream 107107 38234697 ~ 38244140 (+)
AMCG00014882 NA coding upstream 123418 38220521 ~ 38227829 (+)
AMCG00014877 LOC103393291,LOC102224681,LOC106943710,LOC107376358,LOC103147375,LOC106607450 coding upstream 170791 38177874 ~ 38180456 (+)
AMCG00014876 NA coding upstream 175081 38169869 ~ 38176166 (+)
AMCG00014887 NA coding downstream 99238 38458369 ~ 38466227 (+)
AMCG00014890 NA coding downstream 194841 38553972 ~ 38572905 (+)
AMCG00014892 NA coding downstream 269990 38629121 ~ 38642517 (+)
AMCG00014893 NA coding downstream 283923 38643054 ~ 38646942 (+)
AMCG00014896 NA coding downstream 424264 38783395 ~ 38784172 (+)
G74067 NA non-coding upstream 37630 38311476 ~ 38313617 (+)
G73944 NA non-coding upstream 418452 37932522 ~ 37932795 (+)
G73939 NA non-coding upstream 466559 37876261 ~ 37884688 (+)
G73917 NA non-coding upstream 529885 37821086 ~ 37821362 (+)
G73914 NA non-coding upstream 605060 37745983 ~ 37746187 (+)
G74157 NA non-coding downstream 289791 38648922 ~ 38649249 (+)
G74159 NA non-coding downstream 292266 38651397 ~ 38655398 (+)
G74192 NA non-coding downstream 352577 38711708 ~ 38712076 (+)
G74195 NA non-coding downstream 354534 38713665 ~ 38714115 (+)
G74202 NA non-coding downstream 373587 38732718 ~ 38751366 (+)
G73850 NA other upstream 832841 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 2938660 35390634 ~ 35412587 (+)
G73343 NA other upstream 3390800 34942011 ~ 34960447 (+)
G73329 NA other upstream 3570657 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 4111847 34238934 ~ 34239400 (+)
G74114 NA other downstream 73243 38432374 ~ 38432861 (+)
G74227 NA other downstream 451562 38810693 ~ 38811128 (+)
G74348 NA other downstream 977137 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 1224907 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 1247756 39606887 ~ 39621186 (+)

Expression


Co-expression Network