AMCG00014887


Basic Information

Item Value
gene id AMCG00014887
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38458369 ~ 38466227 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014887
gagagagactgtgtgacATCCTGCGCCGCCGCGTCGCGCATGTATAGCGCAGCAAAGCAGAGACGCAGGCGACTATATCGCCACAATGATGACCGGAGACTAACGGGACTTAAACGCATTTTTTTAAACGATCGTTTACACCTGTATCGCTTCCAGACGGACGGATTTCTAGTCACCAAGTAAGTCGAGACACTGACGTCTGTTACAGGACTGTATTCATATAATTCCGctttctttgaaataaaaagtaGGAAGCGATACTCTACTCGATTCGTATCTAAATTCAGTTTGTTTGAAAAGTCTATAACACTgcgactactactactactattaataataatgatgttgaAGATAACGAAAGTCGTTTTTGTTATTTGGCAGGTTTAACTGTAACTTTATGACCGTGATAGTTgttgtattaaatgttattaatatagCCAGATAGCCAAGTCCAGATTGAATCCTGGTTGTTAATATACAGGTCTTGGTTTGTCCGTATAAtaggtttaaataaaatcaaattaataaacgAGAATAATAAAACAGGCTAAAATGATTTTAACGCACAGTTCCCCATCCGCCCATACTCTACACGCATATGCACGGCTCATAACGCCTTATCAAGATATAGGTAACTAAAACGGTAAAGTCGTGACAGTAGGAGTTAAAGTAATAACTTTAGTAGTAACCATTATGTGGTATGTTATACAAaccatacatgcatacataaccgacttaattacttaattacatcAATAGTAGAAATAACCGTCTTACACCTGTCGCAAAAGGCTTTTCCACATAAacgttttaaaaaaaaagctaataaatacatatcatatttggatttaaataaaagtcTGGTACCATATATACTGGGCAGGTTCAGAAGCAGTTCTAGTCGGATTGTGGTTACGCAGTAGTGACATTAGCGCTACACGCAGCCGGTACAGTGATACACCCTGTGGGGTTATTCGTGTTTCTTATGATGTTCCTGAGGAGGGTTTTAGTGGCTCTGTGCGGAGCTACTGTAACTTTCTTCCTCGTCGTGCTGGTGGACCTCCAGCTGCGGATTCAGACCCGAGAGAAGTCGGGTGCGATCGGGGCTGCTGGGCGCGGGGTCTGGAGCGATTCCCGCACCCACCCTGGCCCGCCGCCAGGCCCCTCTAGCCCGCAGTACAGTTGGGGGCAGCCACAGGGGCGGGGGAACGCGCTCAGCTCGGCTCTGAACAGGAGCTTGGCTGCCTTGGAGCAGGAGATTAAGTACAGGAGAGATCGGTTGTCCGGGCTGAGAGGCAGAGTGACCCCCCGCCCACCGCTCCAGCTGTCCGACATCTTCATCGCCGTCAAGACAACCGGGCGGTTTCACAGCTCACGCCTAGCGTTGCTATTGGAAACTTGGATCTCTAGAACCAAGGACCACACCTACATCTTCACTGACCGAGAGGACAAGGACCTGGCTCTGAAAGacTATAAAGTGATGGTCACTAACTGCTCCTCTGAGTACAGCCATCAGGCCCTGTCCTGCAAAATGTCTGCAGAGTATGATGTGTTCATGGCTTCCTCCAAAGAGTGGTTCTGCCACGTGGACGATGACAACTACCTGAACCCCTGCGCTCTGCTGCGGGTACTCCGCAAACTGGCAGAGAAGATGGCACCCTGGGCAAgCGGCCCACAGTTTGAGCAGTCCTCTGCAGTGATCCGGCTGCCTGACGACTGCACTGTGGGCTTCATCGTGGAGCAGCGCCTGGGTGTGCCCCTACTGCACAGCCCCCTGTTCCACTCGCACCTGGAGAACCTGCAGCTCATCTCCCCCCAGCAGTTGCCCCAGCAGgtgaCCTTGAGCTACGGGCTGTTTGAGAAGGAAATGAACAGTGTGGAGATTAGAGGAGCCTTCTCCCCTGACACTGACCCCTCCAGgTTCAAGAGTGTCCATTGTCTACTGTACCCGGACACTCACTGGTGCCCCCGGCCATTTCCCATGTGACCTTTCACCTTCGTTGCTccggaaaaaagggaaaaccgAGCAAACTgaaagggaagaaaagaaacactgcTTATTGCTCTCAGATGGACAGATGCTTCTGCAGAAAATTGCACTAAATGACAACAAGAACTGGGACCAGCCTctttatccctctctctccatccctccctccttccatTCCTCTGCCAGTAATGAACTGAACTTGCAGAGGGGCTGGGCTGGACAGAGGCCGGTGTCTTTTACACAAATTGAGGACAGactgaatacatttctgtttgtagAACAATGAAGTCTGTGATCCTGCAGCAGTGCAGTCTGTACTGTGTCggtccaggaccagggctggagaccctgctgtactgtactcttaaatttattttgtatatttttgtacttgCTTAAATATTTTCACATCTGCTGTGCAGCTGTCATtcatcatgtttttaatatttaagttaattatgGGAGGTGGGGtgtgaaaacaataaaagcatcttgtatcaaaacaaaataatgaaactgttgtttatatatagatagatttaATGAGTGgcagcaccaaaaaaaaaa

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014887 True 2557 mRNA 0.47 8 38458369 38466227

Neighbor

gene id symbol gene type direction distance location
AMCG00014884 NA coding upstream 99238 38351247 ~ 38359131 (+)
AMCG00014880 NA coding upstream 200952 38252962 ~ 38257417 (+)
AMCG00014881 NA coding upstream 214229 38234697 ~ 38244140 (+)
AMCG00014882 NA coding upstream 230540 38220521 ~ 38227829 (+)
AMCG00014877 LOC103393291,LOC102224681,LOC106943710,LOC107376358,LOC103147375,LOC106607450 coding upstream 277913 38177874 ~ 38180456 (+)
AMCG00014890 NA coding downstream 87745 38553972 ~ 38572905 (+)
AMCG00014892 NA coding downstream 162894 38629121 ~ 38642517 (+)
AMCG00014893 NA coding downstream 176827 38643054 ~ 38646942 (+)
AMCG00014896 NA coding downstream 317168 38783395 ~ 38784172 (+)
AMCG00014898 NA coding downstream 495726 38961953 ~ 38968022 (+)
G74067 NA non-coding upstream 144752 38311476 ~ 38313617 (+)
G73944 NA non-coding upstream 525574 37932522 ~ 37932795 (+)
G73939 NA non-coding upstream 573681 37876261 ~ 37884688 (+)
G73917 NA non-coding upstream 637007 37821086 ~ 37821362 (+)
G73914 NA non-coding upstream 712182 37745983 ~ 37746187 (+)
G74157 NA non-coding downstream 182695 38648922 ~ 38649249 (+)
G74159 NA non-coding downstream 185170 38651397 ~ 38655398 (+)
G74192 NA non-coding downstream 245481 38711708 ~ 38712076 (+)
G74195 NA non-coding downstream 247438 38713665 ~ 38714115 (+)
G74202 NA non-coding downstream 266491 38732718 ~ 38751366 (+)
G74114 NA other upstream 25508 38432374 ~ 38432861 (+)
G73850 NA other upstream 939963 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 3045782 35390634 ~ 35412587 (+)
G73343 NA other upstream 3497922 34942011 ~ 34960447 (+)
G73329 NA other upstream 3677779 34780122 ~ 34780590 (+)
G74227 NA other downstream 344466 38810693 ~ 38811128 (+)
G74348 NA other downstream 870041 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 1117811 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 1140660 39606887 ~ 39621186 (+)
AMCG00014923 NA other downstream 1398855 39865082 ~ 39875428 (+)

Expression


Co-expression Network