AMCG00014890


Basic Information

Item Value
gene id AMCG00014890
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38553972 ~ 38572905 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014890
ATGCGGTTCCGGGAGCTGGGACATCTTCCTGGCGGAGGACGCCTGGAATGGAAGCTGGCAGACCGGGAGAGACACGGCGACTGTGAGAACCTTTGGAGCTCCTGCCCTCAGTCACCTgaaccaccccccaccccccaccccccacagccCTTAGCATGGAACTTCACCCCCAGCCCTGGTGGCCCGTTCTCTGCCCTCACCCCCAGCATGTGGCCACAGGACATCTTGGGCAGCATCAACCAGGATTCAGATGATCCAGAGATCCAATATGATGAGTTTGGTTTCCGGATCGACAATGaagaCCCGGGCCGCGTCACTGGGGGAGGGGTGCTGGCGGAGGACCCGCAGCAGCGGCTGCGCTGGCAGGCCCACTTGGAGTTCACCCACAACCATGCTGTGGGGGACCTGACCTGGGAGCACATCGCCCCCTGCCTGCCCCGCTCTGACCGGGTCGCTGCCCTCGTGCTGGGGGGCATCCCACACAGCATGAGGCCTCAGCTGTGGATGCGTCTGTCTGGTGCTCTGCAGAAGAAGCGCACGTCTGAGATCTCCTACAGAGAGATCGTGAAGAACAGCTCCAACGAAGACACTACCGCAGCCAAACAGatagaGAAGGACCTGCTGCGCACCATGCCCAGTAATGCGTGTTTCTGCAGTGCGGGCAGTGTGGGGGTGCCTCGGCTGCGTAGAGTTCTGAGGGCGCTGGCCTGGTTGTACCCCGATATTGGCTACTGCCAGGGCACCGGCATGgtggTGTCCTGCCTGCTGCTGttcctggaggaggaggactgCCTGTGGATGATGTGCTCCCTGATTGAGGAGCTGCTGCCCCCCTCCTACTTCACCTCCACTCTGCTGGGTGTCCAGACTGACCAAAGAGTGCTGCGCCAGCTTATTGTCCAGCACTTGCCCCGGTTGGACCGCCTGCTACAGGAGCACGACATTGAGCTGTCTCTGATCACACTGCACTGGTTTCTGACCGCCTTCGCCAGTGTGGTGAGCGTGCCACTGCTGCTGCGCCTCTGGGACCTGCTGTTCTACCACGGCTCAATCGTGCTATTCCAGGTCACACTGGGCATGCTCAAGATCAAGGAGGAGGAACTGGTGTCCTCTGAGAACTCGGCCTCCATCTTCAACACCCTGTCGGACCTGCCAGGGCAGCTGGGCGACGGGCGGCGTGTGCTGGAGGAGGCGGCTGCATTGGAGGGGTCCCTGTGCCCCCAGGCCCTGGAGGCCCAGCGGCGCAAACACATGGCCTACCTGCTGGCGGAACAGCAGGCCCAGCTCAGCAACACACACCCCCCTGCCTTGAGCCCCTCCCTGGGCAAGGTGGTCCGGCGGCAGGGCCCACGCCGCCGCTCGGCCCTGTCCTCCCTGCTGTTTGGTGACGAGGAGGCGGCTGCGGCACTCAAGGCCAAGAACGTGCGGCAGACAGAGCTGGTGGCAGCGCTTCGGGACGCCATTGCCCGTCTGGCACAGCACTTCCACTGCCTGGACCCCCGGCACTGCACcactgatctCACTCCAGATTACTCCATGGAGAGCCACCAGAAGGACCATGAGAACTTTGTCCTGGTATCTCGTTGCCGGCGGAGACGGGCCCGAGCTCTGCTGGACTTCGAGCACGAACACTGCTGGGTGGGAGAGCTCAATGGCCTGCGAGGGTGGTTTCCTGCGAAATTTGTGGAGGTTTTGGATGAGCGCAGTAAAGAGGCAGTGACGGATCTGGTGCGCGGGACGCTGTGTCCGGCTCTGAAAGCCATCTTCCAGCACGGCCTGAAGAAGCCCTCCATCCTGGGGGGGCCCTGCCACCCCTGGCTCTTCATAGAGGAGGCTGCTAGCAGAGAAGTAGAAAGAGACTTCAACTCTGTGTATTCCCGACTTGTCCTCTGTAAGACCTATAGACTGGATGAGGATGGGAAAGTTCTGACCCCAGAGGAGCTCCTGTACAGAGTACTGCATCTGTGGCTGGAGGTGCTATGCTCCAGTGTGCCGGCTGTGGAGAAGTGGTACCTGCCCTGGTCCTTCCTGCGCAGCCCAGGCTGGGTCCAGATCAAGTGTGAgctcagGGTTCTGTCCAAATTCGCCTTCAGTCTATCCCAGGACTGTGAGCTGGCTGATAAGAAACAGACCTCGCCGCTCATGCGATCGGGAGTGGTGGACATGCTGGTCAAACACCACCTCTTTAGCTGGGACCTGTAG

Function

GO:      GO:0005097,GO:0032313

KEGG:

id description
K20176 SGSM3, MAP; small G protein signaling modulator 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014890 True 2202 mRNA 0.61 21 38553972 38572905

Neighbor

gene id symbol gene type direction distance location
AMCG00014887 NA coding upstream 87745 38458369 ~ 38466227 (+)
AMCG00014884 NA coding upstream 194841 38351247 ~ 38359131 (+)
AMCG00014880 NA coding upstream 296555 38252962 ~ 38257417 (+)
AMCG00014881 NA coding upstream 309832 38234697 ~ 38244140 (+)
AMCG00014882 NA coding upstream 326143 38220521 ~ 38227829 (+)
AMCG00014892 NA coding downstream 56216 38629121 ~ 38642517 (+)
AMCG00014893 NA coding downstream 70149 38643054 ~ 38646942 (+)
AMCG00014896 NA coding downstream 210490 38783395 ~ 38784172 (+)
AMCG00014898 NA coding downstream 389048 38961953 ~ 38968022 (+)
AMCG00014899 NA coding downstream 655022 39227927 ~ 39233005 (+)
G74067 NA non-coding upstream 240355 38311476 ~ 38313617 (+)
G73944 NA non-coding upstream 621177 37932522 ~ 37932795 (+)
G73939 NA non-coding upstream 669284 37876261 ~ 37884688 (+)
G73917 NA non-coding upstream 732610 37821086 ~ 37821362 (+)
G73914 NA non-coding upstream 807785 37745983 ~ 37746187 (+)
G74157 NA non-coding downstream 76017 38648922 ~ 38649249 (+)
G74159 NA non-coding downstream 78492 38651397 ~ 38655398 (+)
G74192 NA non-coding downstream 138803 38711708 ~ 38712076 (+)
G74195 NA non-coding downstream 140760 38713665 ~ 38714115 (+)
G74202 NA non-coding downstream 159813 38732718 ~ 38751366 (+)
G74114 NA other upstream 121111 38432374 ~ 38432861 (+)
G73850 NA other upstream 1035566 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 3141385 35390634 ~ 35412587 (+)
G73343 NA other upstream 3593525 34942011 ~ 34960447 (+)
G73329 NA other upstream 3773382 34780122 ~ 34780590 (+)
G74227 NA other downstream 237788 38810693 ~ 38811128 (+)
G74348 NA other downstream 763363 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 1011133 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 1033982 39606887 ~ 39621186 (+)
AMCG00014923 NA other downstream 1292177 39865082 ~ 39875428 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location