AMCG00014892


Basic Information

Item Value
gene id AMCG00014892
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38629121 ~ 38642517 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014892
ATGCAAGCGGGTACCGGCGGCTCGACAGCTGCTATGGGTCCCGGGCTCAGGTTCGGCTCCGAAACCGATACCGAAGCCATCCCCTCCGACTTTTCGGCCACTGTTAGTGACGTCAACGTCCCGAACCTGAAGCTGATGCAAACTCGGCAATctggaaacatttattttgtgggtGACCTGCTACACTTAATCCCGTTTCCATTGGTGCTGAAGAAGAGCGTCTAGCCTCAGCTACCTGTACATTGGGCGAGAGAGCTGCCAATCACCCGGTCTTCGCAATATAACAGTCCCTTGTGAGGGGCAGAGGGCTTCTTCTCACCCTTTGGCAGCAGGAGAGAGGATCAGGATGGCAGATGTTAAGGTGCAAAACCTGGCCTTCAGAGCAGGGCAGACCCTGAAGGTGAAGGGGAAACCCAAATCAGGCTGCAGTGGGTTTGCCATCAACTTGGGTCACTCAGAGAATGATGTGGCTCTGCACTTTAACCCCCGCTTCGACGCCCACGGTGACTTGCGCACCATCGTAATGAACTCTCGGCAGGGCGGGGCCTGGGGCAGCGAGCAGAGAGAGTCTTCATTTCCCTTCCAGCAGGGGGAGGAGTTCAAGGTCTACATCACCCACAACAACGACTCATTCGAGGTGAAGCTCTCTGACGGCTCTGTGATCCACTTCCCCAATCGCCTGGGAGACGACCAGTTCCTGTACATGCAGCTGGAAGGCGAAGTCCAGCTTGTGTCCATCCATATCAAATAAGGGGTCTGCCAGGGTTCAGCACTGAGTACAGAGGTTGGgtatttttctcttcctttggAAGCACAACATTTGCAGACTGACTCTAATATCTATCAGTCACAGACCTTCGCCTATATAAAAGCATAGTAATATCTATCTCCAGATTGCAGTGAAAACACTGTCCTGAACGTTAGACTGTTTTACACAGGAAGAGTGCACATACTTACACTTGGTACACAAGTCACTGGGGTCTGGTGCTAGAGTGCTGCTTAAAATCCTTAGAACCTTGAGTACTGTTTAAATTAGTCTTTATGTTCTTTGTGTGTCCACATGCACCCAGGACCACACACGACCATAGaatatgtacacacactggTACTCACACAAGcatgctctctcacacacttacCAATAGCTCTGTAATCTTCAACTTACCTGCAGTGGACAAAAATGCTAACCTCTTCACACTGCTGTTATTTGATGGGGTCACACAGATATCTCATCACCACTGAAATCTGCAGCTGAACACTAGTATAGCTTTTTAATTGGTTGGTCTGTTCTTTTGCTTTGCTTCAATGCAGagtctgcccccccccccccccccccccccccccccccccNNNNNNNNNNCACCTTGCAATACCTAGAAATCCCCATCAGCTATTCATATCCACAGGGAAAACTAAAGGAATCAGTATTGTTTGCTTTGCAGTCCCATTTCTCAACTGTTCTATTTACTATTAAAAGTTCTCTTGTGTAACCGTTCCTGggtctttttttattgatttgtttgtattgcttttttaagtttcctaaatgcatataaaaacacacaattgtgCGCATTCGCACCCACACAGGGTATAAACACACATcgaaa

Function

GO:

id name namespace
GO:0048741 skeletal muscle fiber development biological_process
GO:0090303 positive regulation of wound healing biological_process
GO:0002040 sprouting angiogenesis biological_process
GO:0050769 positive regulation of neurogenesis biological_process
GO:0030246 carbohydrate binding molecular_function
GO:0016936 galactoside binding molecular_function
GO:0043236 laminin binding molecular_function

KEGG:

id description
K06830 LGALS1; galectin-1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014892 True 1610 mRNA 0.48 6 38629121 38642517

Neighbor

gene id symbol gene type direction distance location
AMCG00014890 NA coding upstream 56216 38553972 ~ 38572905 (+)
AMCG00014887 NA coding upstream 162894 38458369 ~ 38466227 (+)
AMCG00014884 NA coding upstream 269990 38351247 ~ 38359131 (+)
AMCG00014880 NA coding upstream 371704 38252962 ~ 38257417 (+)
AMCG00014881 NA coding upstream 384981 38234697 ~ 38244140 (+)
AMCG00014893 NA coding downstream 537 38643054 ~ 38646942 (+)
AMCG00014896 NA coding downstream 140878 38783395 ~ 38784172 (+)
AMCG00014898 NA coding downstream 319436 38961953 ~ 38968022 (+)
AMCG00014899 NA coding downstream 585410 39227927 ~ 39233005 (+)
AMCG00014900 myh9,myh9b,LOC107672897,LOC107745511,LOC107751969,LOC107572814 coding downstream 595107 39237624 ~ 39260277 (+)
G74067 NA non-coding upstream 315504 38311476 ~ 38313617 (+)
G73944 NA non-coding upstream 696326 37932522 ~ 37932795 (+)
G73939 NA non-coding upstream 744433 37876261 ~ 37884688 (+)
G73917 NA non-coding upstream 807759 37821086 ~ 37821362 (+)
G73914 NA non-coding upstream 882934 37745983 ~ 37746187 (+)
G74157 NA non-coding downstream 6405 38648922 ~ 38649249 (+)
G74159 NA non-coding downstream 8880 38651397 ~ 38655398 (+)
G74192 NA non-coding downstream 69191 38711708 ~ 38712076 (+)
G74195 NA non-coding downstream 71148 38713665 ~ 38714115 (+)
G74202 NA non-coding downstream 90201 38732718 ~ 38751366 (+)
G74114 NA other upstream 196260 38432374 ~ 38432861 (+)
G73850 NA other upstream 1110715 37518108 ~ 37518406 (+)
AMCG00014836 NA other upstream 3216534 35390634 ~ 35412587 (+)
G73343 NA other upstream 3668674 34942011 ~ 34960447 (+)
G73329 NA other upstream 3848531 34780122 ~ 34780590 (+)
G74227 NA other downstream 168176 38810693 ~ 38811128 (+)
G74348 NA other downstream 693751 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 941521 39584038 ~ 39588507 (+)
AMCG00014913 NA other downstream 964370 39606887 ~ 39621186 (+)
AMCG00014923 NA other downstream 1222565 39865082 ~ 39875428 (+)

Expression


Co-expression Network