AMCG00014905


Basic Information

Item Value
gene id AMCG00014905
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39282154 ~ 39285347 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014905
atgcAAGCCAGCCAGGAGTCTGCTGACCAGCACAAGAAACGCACAAGACTGGAGAAgGCCCACCCTGCATTGAAGGCGTTCATGTGCGGCTCTCTGAGCGGGACCTGCTCCACCCTGCTGTTCCAGCCCCTGGACCTGGTCAAGACTCGCCTGCAGACCTACAGCTCCCTGCAGCAGGGGTCCTCTCGCGTTGGCATGGTGGCCGTGTTCCTCAGTGTGGTCCGCACAGAGAAGCTGCTGGGGCTGTGGAAGGGCGTGTCTCCGtCTTGTGTGCGCTGTATCCCCGGCGTTGGGATCTACTTCAGCACCTTCTTCTCCCTGAAGCAGCACTTCTTCTCTGAGCGTGCTCCGTCCGCCCTGGAGGCGGTGCTGCTGGGGGCGGGGGCGCGGTCAGTCGCCGGGGTGTGCATGCTGCCCGTTACCGTGGTAAAGACGCGCTTTGAGAGCGGGCGGTACGGCTATGTCAGTGTCCTGGGGGCCCTGCGCACCATGTACCTGTCCGAGGGACCACGTTCGCTGTTCTCTGGCCTGACCGCCACGCTGCTCCGAGACGCCCCCTTCTCAGGCATCTACGTCATGTTCTACAGTCAGGCCAAGAAGGCCCTGCCCCCAGAGCTCACGAGCGCCCCCTGTGCTCCGCTGGCGAACTTTGGCTGCGGTGTGTTTGCAGGGGTGCTGGCTGCCGTGGCAACTCAGCCAGCCGACacTCAGGGTGTGCAGGGTTTTTTCCGTGGTGCAGTTCCTCGTGCCCTGAGGAGGACGCTGATGGCCGCCATGGCCTGGACAGTCTATGAGCAGCTGATGGCCAAGATGGGCCTGAAGTCCTGA

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15118 SLC25A38; solute carrier family 25, member 38

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014905 True 828 mRNA 0.63 7 39282154 39285347

Neighbor

gene id symbol gene type direction distance location
AMCG00014903 NA coding downstream 11910 39263141 ~ 39270244 (-)
AMCG00014901 NA coding downstream 65056 39205047 ~ 39217098 (-)
AMCG00014902 NA coding downstream 105493 39138823 ~ 39176661 (-)
AMCG00014897 NA coding downstream 445802 38728989 ~ 38836352 (-)
AMCG00014895 NA coding downstream 594093 38676409 ~ 38688061 (-)
AMCG00014910 NA coding upstream 245979 39531326 ~ 39536843 (-)
AMCG00014915 NA coding upstream 307267 39592614 ~ 39599496 (-)
AMCG00014917 NA coding upstream 355064 39640411 ~ 39641256 (-)
AMCG00014916 NA coding upstream 363457 39648804 ~ 39657562 (-)
AMCG00014920 si:ch211-241c24.3,si:ch211-241c24.4,LOC107745955,LOC107553807 coding upstream 477223 39762570 ~ 39764640 (-)
G74368 NA non-coding downstream 43390 39232304 ~ 39238764 (-)
G74307 NA non-coding downstream 99520 39182366 ~ 39182634 (-)
G74277 NA non-coding downstream 240106 39002622 ~ 39042048 (-)
G74239 NA non-coding downstream 414228 38867561 ~ 38867926 (-)
G74232 NA non-coding downstream 445015 38836895 ~ 38837139 (-)
G74367 LOC103154960,LOC103154959,LOC107580460,LOC107576269,LOC106912990 non-coding upstream 8604 39293951 ~ 39299385 (-)
G74384 NA non-coding upstream 16577 39301924 ~ 39302208 (-)
G74385 NA non-coding upstream 17674 39303021 ~ 39303224 (-)
G74386 NA non-coding upstream 20361 39305708 ~ 39305970 (-)
G74387 NA non-coding upstream 29219 39314566 ~ 39315128 (-)
G74375 myh9,LOC100380669 other downstream 21794 39258062 ~ 39260360 (-)
G74247 LOC100136012,LOC107575789 other downstream 361801 38898095 ~ 38920353 (-)
G74160 NA other downstream 637616 38597368 ~ 38644538 (-)
AMCG00014891 NA other downstream 789200 38488619 ~ 38492954 (-)
G74115 NA other downstream 849279 38432263 ~ 38432875 (-)
AMCG00014906 NA other upstream 92828 39378175 ~ 39379153 (-)
AMCG00014914 ankrd54,LOC107563363,LOC107728844,LOC107559232,LOC107670919,LOC107719341 other upstream 305149 39590496 ~ 39591658 (-)
G74477 NA other upstream 352552 39637899 ~ 39638957 (-)
G74569 NA other upstream 616123 39901470 ~ 39983396 (-)
G74593 NA other upstream 649546 39934893 ~ 40012081 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000222_00091632_00097532 SLC25A38A coding CI01000222 null 90064 ~ 97532 (-)